RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 FAM19A1Q7Z5A9 133 aa12.1□□□□□ -0.47
RNF139-201ENST00000303545 DNAH7Q8WXX0 4024 aa12.09□□□□□ -0.47
RNF139-201ENST00000303545 CSMD3Q7Z407 3707 aa12.09□□□□□ -0.47
RNF139-201ENST00000303545 COX7CP15954 63 aa12.09□□□□□ -0.47
RNF139-201ENST00000303545 UBL5Q9BZL1 73 aa12.08□□□□□ -0.47
RNF139-201ENST00000303545 LOC110117498A0A087WWA1 95 aa12.07□□□□□ -0.48
RNF139-201ENST00000303545 LOC107984640A0A0U1RRK4 108 aa12.07□□□□□ -0.48
RNF139-201ENST00000303545 FAM19A5Q7Z5A7 132 aaPredicted RBP12.07□□□□□ -0.48
RNF139-201ENST00000303545 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
RNF139-201ENST00000303545 TRBV7-6A0A0J9YX20 115 aa12.07□□□□□ -0.48
RNF139-201ENST00000303545 F8WDY8 70 aa12.06□□□□□ -0.48
RNF139-201ENST00000303545 KRTAP7-1Q8IUC3 87 aa12.06□□□□□ -0.48
RNF139-201ENST00000303545 MDFIQ99750 246 aa12.05□□□□□ -0.48
RNF139-201ENST00000303545 HAMPP81172 84 aa12.05□□□□□ -0.48
RNF139-201ENST00000303545 KCNQ1DNQ9H478 68 aa12.04□□□□□ -0.48
RNF139-201ENST00000303545 ATOX1O00244 68 aa12.04□□□□□ -0.48
RNF139-201ENST00000303545 CRYGAP11844 174 aa12.04□□□□□ -0.48
RNF139-201ENST00000303545 RMI2Q96E14 147 aa12.03□□□□□ -0.48
RNF139-201ENST00000303545 TLX1NBP0CAT3 122 aa12.02□□□□□ -0.49
RNF139-201ENST00000303545 Q6ZVQ6 151 aa12.02□□□□□ -0.49
RNF139-201ENST00000303545 SCXQ7RTU7 201 aa12.01□□□□□ -0.49
RNF139-201ENST00000303545 CYSTM1Q9H1C7 97 aa12.01□□□□□ -0.49
RNF139-201ENST00000303545 TRBV7-4A0A0J9YYF1 115 aa12.01□□□□□ -0.49
RNF139-201ENST00000303545 UPK3BQ9BT76 320 aa12□□□□□ -0.49
RNF139-201ENST00000303545 J3KT08 172 aa11.99□□□□□ -0.49
RNF139-201ENST00000303545 UBE2DNLQ8IWF7 75 aa11.99□□□□□ -0.49
RNF139-201ENST00000303545 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
RNF139-201ENST00000303545 IGKV2-24A0A0C4DH68 120 aa11.98□□□□□ -0.49
RNF139-201ENST00000303545 H3BQ85 93 aa11.98□□□□□ -0.49
RNF139-201ENST00000303545 LINC01547P58512 204 aaPredicted RBP11.98□□□□□ -0.49
RNF139-201ENST00000303545 Q9BRP9 147 aa11.98□□□□□ -0.49
RNF139-201ENST00000303545 ST20-AS1Q8NBB2 130 aa11.97□□□□□ -0.49
RNF139-201ENST00000303545 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.97□□□□□ -0.49
RNF139-201ENST00000303545 PSCAO43653 123 aa11.96□□□□□ -0.49
RNF139-201ENST00000303545 Q8N377 158 aa11.96□□□□□ -0.49
RNF139-201ENST00000303545 ETDCA0A1B0GVM5 59 aa11.96□□□□□ -0.5
RNF139-201ENST00000303545 ATP5EP2Q5VTU8 51 aa11.96□□□□□ -0.5
RNF139-201ENST00000303545 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.5
RNF139-201ENST00000303545 MRPL55Q7Z7F7 128 aaKnown RBP11.95□□□□□ -0.5
RNF139-201ENST00000303545 PDE6GP18545 87 aa11.95□□□□□ -0.5
RNF139-201ENST00000303545 Q6ZRX8 168 aa11.95□□□□□ -0.5
RNF139-201ENST00000303545 GHRHP01286 108 aa11.94□□□□□ -0.5
RNF139-201ENST00000303545 PLA2G2DQ9UNK4 145 aa11.94□□□□□ -0.5
RNF139-201ENST00000303545 ERC2-IT1O76042 136 aa11.93□□□□□ -0.5
RNF139-201ENST00000303545 KRTAP4-16G5E9R7 235 aaPredicted RBP11.92□□□□□ -0.5
RNF139-201ENST00000303545 SERP2Q8N6R1 65 aa11.92□□□□□ -0.5
RNF139-201ENST00000303545 A0A096LNI7 61 aa11.92□□□□□ -0.5
RNF139-201ENST00000303545 C3orf84H3BNL1 204 aa11.92□□□□□ -0.5
RNF139-201ENST00000303545 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
RNF139-201ENST00000303545 RPS28P62857 69 aaKnown RBP11.91□□□□□ -0.5
RNF139-201ENST00000303545 IGLV5-37A0A075B6J1 123 aa11.9□□□□□ -0.5
RNF139-201ENST00000303545 PRYO14603 147 aa11.9□□□□□ -0.5
RNF139-201ENST00000303545 UBE2BP63146 152 aa11.9□□□□□ -0.5
RNF139-201ENST00000303545 DHRS4-AS1Q9P1J3 65 aa11.88□□□□□ -0.51
RNF139-201ENST00000303545 A0A1W2PNN7 141 aa11.88□□□□□ -0.51
RNF139-201ENST00000303545 SPRR1AP35321 89 aa11.88□□□□□ -0.51
RNF139-201ENST00000303545 Q8N9L7 120 aa11.88□□□□□ -0.51
RNF139-201ENST00000303545 SRRM2Q9UQ35 2752 aaKnown RBP11.87□□□□□ -0.51
RNF139-201ENST00000303545 DYNC2H1Q8NCM8 4307 aaKnown RBP11.87□□□□□ -0.51
RNF139-201ENST00000303545 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
RNF139-201ENST00000303545 TMEM258P61165 79 aa11.87□□□□□ -0.51
RNF139-201ENST00000303545 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
RNF139-201ENST00000303545 C5orf47Q569G3 176 aa11.85□□□□□ -0.51
RNF139-201ENST00000303545 REG3GQ6UW15 175 aa11.85□□□□□ -0.51
RNF139-201ENST00000303545 PRLHP81277 87 aa11.84□□□□□ -0.51
RNF139-201ENST00000303545 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
RNF139-201ENST00000303545 A0A0G2JQZ4 141 aa11.83□□□□□ -0.52
RNF139-201ENST00000303545 STARD9Q9P2P6 4700 aa11.82□□□□□ -0.52
RNF139-201ENST00000303545 OXTP01178 125 aa11.81□□□□□ -0.52
RNF139-201ENST00000303545 CXCL6P80162 114 aa11.81□□□□□ -0.52
RNF139-201ENST00000303545 C16orf90A8MZG2 172 aa11.81□□□□□ -0.52
RNF139-201ENST00000303545 NREPQ16612 68 aa11.81□□□□□ -0.52
RNF139-201ENST00000303545 PRKDCP78527 4128 aaKnown RBP11.81□□□□□ -0.52
RNF139-201ENST00000303545 IGLV5-48A0A075B6I7 105 aa11.79□□□□□ -0.52
RNF139-201ENST00000303545 CNBPP62633 177 aaKnown RBP11.79□□□□□ -0.52
RNF139-201ENST00000303545 C1orf137Q5JT78 98 aa11.79□□□□□ -0.52
RNF139-201ENST00000303545 KRTAP11-1Q8IUC1 163 aa11.79□□□□□ -0.52
RNF139-201ENST00000303545 A0A1W2PNM2 257 aa11.78□□□□□ -0.52
RNF139-201ENST00000303545 PHF5AQ7RTV0 110 aaKnown RBP11.78□□□□□ -0.52
RNF139-201ENST00000303545 BPY2O14599 106 aa11.77□□□□□ -0.52
RNF139-201ENST00000303545 HIGD2AQ9BW72 106 aa11.77□□□□□ -0.53
RNF139-201ENST00000303545 FUSP35637 526 aaKnown RBP eCLIP11.76□□□□□ -0.53
RNF139-201ENST00000303545 C20orf197Q8N268 126 aa11.75□□□□□ -0.53
RNF139-201ENST00000303545 TNP2Q05952 138 aa11.74□□□□□ -0.53
RNF139-201ENST00000303545 NBDYA0A0U1RRE5 68 aa11.73□□□□□ -0.53
RNF139-201ENST00000303545 MEGF8Q7Z7M0 2845 aa11.72□□□□□ -0.53
RNF139-201ENST00000303545 SMIM29Q86T20 159 aa11.72□□□□□ -0.53
RNF139-201ENST00000303545 LRCOL1A6NCL2 159 aa11.71□□□□□ -0.53
RNF139-201ENST00000303545 PANO1I0J062 215 aa11.71□□□□□ -0.53
RNF139-201ENST00000303545 IGKV4-1P06312 121 aa11.7□□□□□ -0.54
RNF139-201ENST00000303545 C4orf26Q17RF5 130 aa11.7□□□□□ -0.54
RNF139-201ENST00000303545 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
RNF139-201ENST00000303545 LINC00476Q8WZB0 136 aa11.69□□□□□ -0.54
RNF139-201ENST00000303545 Q5XG85 94 aa11.68□□□□□ -0.54
RNF139-201ENST00000303545 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
RNF139-201ENST00000303545 Q8NBF4 154 aa11.68□□□□□ -0.54
RNF139-201ENST00000303545 SNURFQ9Y675 71 aa11.68□□□□□ -0.54
RNF139-201ENST00000303545 KMT2AQ03164 3969 aa11.67□□□□□ -0.54
RNF139-201ENST00000303545 TRAV7A0A075B6U4 112 aa11.67□□□□□ -0.54
RNF139-201ENST00000303545 C9orf163Q8N9P6 203 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms