RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
BRD3-201ENST00000303407 ERC2-IT1O76042 136 aa10.67□□□□□ -0.7
BRD3-201ENST00000303407 CASC10Q5T4H9 136 aa10.66□□□□□ -0.7
BRD3-201ENST00000303407 MTORP42345 2549 aa10.65□□□□□ -0.7
BRD3-201ENST00000303407 BRCA2P51587 3418 aa10.65□□□□□ -0.7
BRD3-201ENST00000303407 SPAG11AQ6PDA7 123 aa10.65□□□□□ -0.71
BRD3-201ENST00000303407 TRANK1O15050 2925 aa10.64□□□□□ -0.71
BRD3-201ENST00000303407 A0A0G2JQZ4 141 aa10.64□□□□□ -0.71
BRD3-201ENST00000303407 A0A1B0GU69 56 aa10.64□□□□□ -0.71
BRD3-201ENST00000303407 A0A1W2PNN7 141 aa10.64□□□□□ -0.71
BRD3-201ENST00000303407 WWC2-AS2Q96NR7 200 aa10.64□□□□□ -0.71
BRD3-201ENST00000303407 ACANP16112 2415 aa10.62□□□□□ -0.71
BRD3-201ENST00000303407 MRPL34Q9BQ48 92 aaKnown RBP10.6□□□□□ -0.71
BRD3-201ENST00000303407 Q96NJ1 140 aa10.58□□□□□ -0.72
BRD3-201ENST00000303407 A0A087WTM6 91 aa10.58□□□□□ -0.72
BRD3-201ENST00000303407 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
BRD3-201ENST00000303407 RANBP2P49792 3224 aaKnown RBP10.58□□□□□ -0.72
BRD3-201ENST00000303407 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
BRD3-201ENST00000303407 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
BRD3-201ENST00000303407 C9orf163Q8N9P6 203 aa10.57□□□□□ -0.72
BRD3-201ENST00000303407 APLNQ9ULZ1 77 aa10.57□□□□□ -0.72
BRD3-201ENST00000303407 OBSCN-AS1Q96MR7 158 aa10.56□□□□□ -0.72
BRD3-201ENST00000303407 LAMA3Q16787 3333 aa10.56□□□□□ -0.72
BRD3-201ENST00000303407 ZNF861PO60384 105 aa10.55□□□□□ -0.72
BRD3-201ENST00000303407 FAM229AH3BQW9 127 aa10.55□□□□□ -0.72
BRD3-201ENST00000303407 KLKP1Q107X0 134 aa10.55□□□□□ -0.72
BRD3-201ENST00000303407 CNBPP62633 177 aaKnown RBP10.54□□□□□ -0.72
BRD3-201ENST00000303407 C8orf17Q9NRJ1 99 aa10.54□□□□□ -0.72
BRD3-201ENST00000303407 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
BRD3-201ENST00000303407 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
BRD3-201ENST00000303407 DSCR10P59022 87 aa10.52□□□□□ -0.73
BRD3-201ENST00000303407 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
BRD3-201ENST00000303407 COA5Q86WW8 74 aa10.51□□□□□ -0.73
BRD3-201ENST00000303407 IGLV5-37A0A075B6J1 123 aa10.51□□□□□ -0.73
BRD3-201ENST00000303407 A0A1B0GVX0 72 aa10.5□□□□□ -0.73
BRD3-201ENST00000303407 ANAPC11Q9NYG5 84 aa10.49□□□□□ -0.73
BRD3-201ENST00000303407 FASNP49327 2511 aaKnown RBP10.49□□□□□ -0.73
BRD3-201ENST00000303407 H7BZZ5 65 aa10.48□□□□□ -0.73
BRD3-201ENST00000303407 PSORS1C2Q9UIG4 136 aa10.46□□□□□ -0.74
BRD3-201ENST00000303407 SSBP3-AS1Q7Z2R9 100 aa10.45□□□□□ -0.74
BRD3-201ENST00000303407 SPRR4Q96PI1 79 aa10.45□□□□□ -0.74
BRD3-201ENST00000303407 IGLV5-48A0A075B6I7 105 aa10.44□□□□□ -0.74
BRD3-201ENST00000303407 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
BRD3-201ENST00000303407 CR1P17927 2039 aa10.43□□□□□ -0.74
BRD3-201ENST00000303407 ATP11AUNQ6ZP68 121 aa10.42□□□□□ -0.74
BRD3-201ENST00000303407 A8MUN3 132 aa10.42□□□□□ -0.74
BRD3-201ENST00000303407 SPINT4Q6UDR6 99 aa10.42□□□□□ -0.74
BRD3-201ENST00000303407 IGLV8-61A0A075B6I0 122 aa10.41□□□□□ -0.74
BRD3-201ENST00000303407 A0A0C4DFX4 3053 aa10.4□□□□□ -0.75
BRD3-201ENST00000303407 LINC00304Q8N9R0 145 aa10.39□□□□□ -0.75
BRD3-201ENST00000303407 WIPF1O43516 503 aa10.39□□□□□ -0.75
BRD3-201ENST00000303407 CDH23Q9H251 3354 aa10.36□□□□□ -0.75
BRD3-201ENST00000303407 Q8NDZ9 215 aa10.36□□□□□ -0.75
BRD3-201ENST00000303407 UNC80Q8N2C7 3258 aa10.36□□□□□ -0.75
BRD3-201ENST00000303407 EPG5Q9HCE0 2579 aa10.36□□□□□ -0.75
BRD3-201ENST00000303407 F8P00451 2351 aa10.35□□□□□ -0.75
BRD3-201ENST00000303407 CYP4F30PQ9H0H9 118 aa10.33□□□□□ -0.76
BRD3-201ENST00000303407 C9orf92A6NGG3 77 aa10.33□□□□□ -0.76
BRD3-201ENST00000303407 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
BRD3-201ENST00000303407 OCR1Q9BZK8 76 aa10.28□□□□□ -0.76
BRD3-201ENST00000303407 LAMA2P24043 3122 aaKnown RBP10.28□□□□□ -0.76
BRD3-201ENST00000303407 CFAP54Q96N23 3096 aa10.27□□□□□ -0.77
BRD3-201ENST00000303407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.27□□□□□ -0.77
BRD3-201ENST00000303407 SPANXA2-OT1Q8N9U9 137 aa10.24□□□□□ -0.77
BRD3-201ENST00000303407 PRUNE2Q8WUY3 3088 aa10.24□□□□□ -0.77
BRD3-201ENST00000303407 HECTD1Q9ULT8 2610 aa10.24□□□□□ -0.77
BRD3-201ENST00000303407 FLNAP21333 2647 aaKnown RBP10.24□□□□□ -0.77
BRD3-201ENST00000303407 LINC00336Q6ZUF6 198 aa10.23□□□□□ -0.77
BRD3-201ENST00000303407 TNP2Q05952 138 aa10.23□□□□□ -0.77
BRD3-201ENST00000303407 MGAQ8IWI9 3026 aa10.22□□□□□ -0.77
BRD3-201ENST00000303407 UQCR11O14957 56 aa10.22□□□□□ -0.77
BRD3-201ENST00000303407 CD164Q04900 197 aa10.22□□□□□ -0.77
BRD3-201ENST00000303407 SPRR1AP35321 89 aa10.19□□□□□ -0.78
BRD3-201ENST00000303407 TRIOO75962 3097 aa10.16□□□□□ -0.78
BRD3-201ENST00000303407 MIR22HGQ0VDD5 57 aa10.16□□□□□ -0.78
BRD3-201ENST00000303407 ITPR3Q14573 2671 aa10.16□□□□□ -0.78
BRD3-201ENST00000303407 DNAH14Q0VDD8 3507 aa10.14□□□□□ -0.79
BRD3-201ENST00000303407 KRTAP26-1Q6PEX3 210 aa10.14□□□□□ -0.79
BRD3-201ENST00000303407 AKAP13Q12802 2813 aa10.14□□□□□ -0.79
BRD3-201ENST00000303407 XIRP2A4UGR9 3374 aa10.13□□□□□ -0.79
BRD3-201ENST00000303407 J3QL48 77 aa10.13□□□□□ -0.79
BRD3-201ENST00000303407 CRIPTQ9P021 101 aa10.12□□□□□ -0.79
BRD3-201ENST00000303407 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
BRD3-201ENST00000303407 Q8N1X5 172 aa10.1□□□□□ -0.79
BRD3-201ENST00000303407 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
BRD3-201ENST00000303407 ZNF292O60281 2723 aa10.09□□□□□ -0.79
BRD3-201ENST00000303407 LCA10Q71F78 164 aa10.08□□□□□ -0.8
BRD3-201ENST00000303407 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
BRD3-201ENST00000303407 KRTAP1-5Q9BYS1 174 aa10.08□□□□□ -0.8
BRD3-201ENST00000303407 CYSTM1Q9H1C7 97 aa10.07□□□□□ -0.8
BRD3-201ENST00000303407 KTN1-AS1Q86SY8 53 aa10.07□□□□□ -0.8
BRD3-201ENST00000303407 MMP24-AS1A0A0U1RRL7 71 aa10.06□□□□□ -0.8
BRD3-201ENST00000303407 Q1T7F1 81 aa10.05□□□□□ -0.8
BRD3-201ENST00000303407 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
BRD3-201ENST00000303407 SPRR1BP22528 89 aa10.01□□□□□ -0.81
BRD3-201ENST00000303407 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
BRD3-201ENST00000303407 FAM229BQ4G0N7 80 aa10□□□□□ -0.81
BRD3-201ENST00000303407 CDC42SE1Q9NRR8 79 aa9.99□□□□□ -0.81
BRD3-201ENST00000303407 LINC00472Q9H8W2 130 aa9.97□□□□□ -0.81
BRD3-201ENST00000303407 HRES1P13985 223 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms