RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 TIMM17BO60830 172 aa6.48□□□□□ -1.37
CLCC1-201ENST00000302500 CTAG1AP78358 180 aa6.48□□□□□ -1.37
CLCC1-201ENST00000302500 HIGD2AQ9BW72 106 aa6.47□□□□□ -1.37
CLCC1-201ENST00000302500 DDTP30046 118 aa6.46□□□□□ -1.38
CLCC1-201ENST00000302500 Q6ZRX8 168 aa6.46□□□□□ -1.38
CLCC1-201ENST00000302500 LINC00308Q8TCZ7 52 aa6.46□□□□□ -1.38
CLCC1-201ENST00000302500 TSPAN13O95857 204 aa6.45□□□□□ -1.38
CLCC1-201ENST00000302500 LINC00304Q8N9R0 145 aa6.45□□□□□ -1.38
CLCC1-201ENST00000302500 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
CLCC1-201ENST00000302500 ATP6V1G1O75348 118 aa6.44□□□□□ -1.38
CLCC1-201ENST00000302500 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
CLCC1-201ENST00000302500 NPC2P61916 151 aa6.43□□□□□ -1.38
CLCC1-201ENST00000302500 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
CLCC1-201ENST00000302500 SPANXCQ9NY87 97 aa6.43□□□□□ -1.38
CLCC1-201ENST00000302500 TRAV23DV6A0A075B6W5 121 aa6.42□□□□□ -1.38
CLCC1-201ENST00000302500 ZNF815PA8K554 130 aa6.42□□□□□ -1.38
CLCC1-201ENST00000302500 KRTDAPP60985 99 aa6.42□□□□□ -1.38
CLCC1-201ENST00000302500 HIST1H2BLQ99880 126 aa6.42□□□□□ -1.38
CLCC1-201ENST00000302500 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
CLCC1-201ENST00000302500 ETDCA0A1B0GVM5 59 aa6.41□□□□□ -1.38
CLCC1-201ENST00000302500 ZNF73O43830 326 aaPredicted RBP6.41□□□□□ -1.38
CLCC1-201ENST00000302500 PCP2Q8IVA1 136 aa6.41□□□□□ -1.38
CLCC1-201ENST00000302500 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
CLCC1-201ENST00000302500 PRR4Q16378 134 aa6.4□□□□□ -1.39
CLCC1-201ENST00000302500 ATOH7Q8N100 152 aa6.4□□□□□ -1.39
CLCC1-201ENST00000302500 ZNF706Q9Y5V0 76 aaPredicted RBP6.4□□□□□ -1.39
CLCC1-201ENST00000302500 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
CLCC1-201ENST00000302500 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
CLCC1-201ENST00000302500 SPRR1BP22528 89 aa6.38□□□□□ -1.39
CLCC1-201ENST00000302500 S100A1P23297 94 aa6.38□□□□□ -1.39
CLCC1-201ENST00000302500 ST20-AS1Q8NBB2 130 aa6.37□□□□□ -1.39
CLCC1-201ENST00000302500 Q8NBF4 154 aa6.37□□□□□ -1.39
CLCC1-201ENST00000302500 C5orf52A6NGY3 159 aa6.36□□□□□ -1.39
CLCC1-201ENST00000302500 ELOF1P60002 83 aaKnown RBP6.36□□□□□ -1.39
CLCC1-201ENST00000302500 RPS29P62273 56 aaKnown RBP6.36□□□□□ -1.39
CLCC1-201ENST00000302500 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
CLCC1-201ENST00000302500 SPAG11AQ6PDA7 123 aa6.36□□□□□ -1.39
CLCC1-201ENST00000302500 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
CLCC1-201ENST00000302500 LINC01547P58512 204 aaPredicted RBP6.34□□□□□ -1.39
CLCC1-201ENST00000302500 Q6ZVH6 145 aa6.34□□□□□ -1.39
CLCC1-201ENST00000302500 Q8N377 158 aa6.34□□□□□ -1.39
CLCC1-201ENST00000302500 C20orf202A1L168 122 aa6.33□□□□□ -1.4
CLCC1-201ENST00000302500 SPINK1P00995 79 aa6.33□□□□□ -1.4
CLCC1-201ENST00000302500 IFITM1P13164 125 aa6.33□□□□□ -1.4
CLCC1-201ENST00000302500 MOBPQ13875 183 aa6.33□□□□□ -1.4
CLCC1-201ENST00000302500 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
CLCC1-201ENST00000302500 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
CLCC1-201ENST00000302500 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
CLCC1-201ENST00000302500 TRBV7-6A0A0J9YX20 115 aa6.32□□□□□ -1.4
CLCC1-201ENST00000302500 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
CLCC1-201ENST00000302500 S100A12P80511 92 aa6.32□□□□□ -1.4
CLCC1-201ENST00000302500 JOSD1Q15040 202 aaPredicted RBP6.32□□□□□ -1.4
CLCC1-201ENST00000302500 C6orf99Q4VX62 202 aa6.32□□□□□ -1.4
CLCC1-201ENST00000302500 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
CLCC1-201ENST00000302500 LINC00518Q8N0U6 118 aa6.32□□□□□ -1.4
CLCC1-201ENST00000302500 IGLV7-46A0A075B6I9 117 aa6.31□□□□□ -1.4
CLCC1-201ENST00000302500 AKR1D1P51857 326 aa6.31□□□□□ -1.4
CLCC1-201ENST00000302500 FP248Q71RG6 208 aaPredicted RBP6.31□□□□□ -1.4
CLCC1-201ENST00000302500 SMIM29Q86T20 159 aa6.31□□□□□ -1.4
CLCC1-201ENST00000302500 SCGB1D4Q6XE38 83 aa6.3□□□□□ -1.4
CLCC1-201ENST00000302500 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
CLCC1-201ENST00000302500 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
CLCC1-201ENST00000302500 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
CLCC1-201ENST00000302500 CBY1Q9Y3M2 126 aa6.28□□□□□ -1.4
CLCC1-201ENST00000302500 COX7BP24311 80 aa6.27□□□□□ -1.41
CLCC1-201ENST00000302500 OR13C6PQ8NH95 151 aa6.27□□□□□ -1.41
CLCC1-201ENST00000302500 SMIM11BQ8TCY0 68 aa6.26□□□□□ -1.41
CLCC1-201ENST00000302500 A0A1B0GWB2 263 aa6.25□□□□□ -1.41
CLCC1-201ENST00000302500 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
CLCC1-201ENST00000302500 S100A2P29034 98 aa6.25□□□□□ -1.41
CLCC1-201ENST00000302500 A4D1N5 150 aa6.24□□□□□ -1.41
CLCC1-201ENST00000302500 DLEU1O43261 78 aa6.24□□□□□ -1.41
CLCC1-201ENST00000302500 COX8AP10176 69 aa6.24□□□□□ -1.41
CLCC1-201ENST00000302500 COPS9Q8WXC6 57 aa6.24□□□□□ -1.41
CLCC1-201ENST00000302500 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
CLCC1-201ENST00000302500 TRAV13-2A0A0B4J235 113 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 A6NDN8 102 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 SLC25A20O43772 301 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 S100A6P06703 90 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 Q5XG85 94 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
CLCC1-201ENST00000302500 TEX49A0A1B0GTD5 131 aa6.21□□□□□ -1.42
CLCC1-201ENST00000302500 CD164Q04900 197 aa6.21□□□□□ -1.42
CLCC1-201ENST00000302500 XP32Q5T750 250 aa6.21□□□□□ -1.42
CLCC1-201ENST00000302500 C9orf153Q5TBE3 101 aa6.21□□□□□ -1.42
CLCC1-201ENST00000302500 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
CLCC1-201ENST00000302500 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
CLCC1-201ENST00000302500 Q1RN00 199 aa6.19□□□□□ -1.42
CLCC1-201ENST00000302500 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
CLCC1-201ENST00000302500 SLC25A34Q6PIV7 304 aa6.18□□□□□ -1.42
CLCC1-201ENST00000302500 HIGD1BQ9P298 99 aa6.18□□□□□ -1.42
CLCC1-201ENST00000302500 LAMTOR3Q9UHA4 124 aa6.18□□□□□ -1.42
CLCC1-201ENST00000302500 IGLV8-61A0A075B6I0 122 aa6.17□□□□□ -1.42
CLCC1-201ENST00000302500 HSBP1L1C9JCN9 74 aa6.17□□□□□ -1.42
CLCC1-201ENST00000302500 CFC1BP0CG36 223 aa6.16□□□□□ -1.42
CLCC1-201ENST00000302500 CFC1P0CG37 223 aa6.16□□□□□ -1.42
CLCC1-201ENST00000302500 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
CLCC1-201ENST00000302500 DEFB105AQ8NG35 78 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms