RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PRR15Q8IV56 129 aa9.65□□□□□ -0.86
CDT1-201ENST00000301019 OTOGQ6ZRI0 2925 aa9.65□□□□□ -0.87
CDT1-201ENST00000301019 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
CDT1-201ENST00000301019 C16orf74Q96GX8 76 aa9.63□□□□□ -0.87
CDT1-201ENST00000301019 TEP1Q99973 2627 aaKnown RBP9.63□□□□□ -0.87
CDT1-201ENST00000301019 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
CDT1-201ENST00000301019 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
CDT1-201ENST00000301019 KRTAP1-1Q07627 177 aa9.61□□□□□ -0.87
CDT1-201ENST00000301019 C9orf66Q5T8R8 295 aa9.61□□□□□ -0.87
CDT1-201ENST00000301019 Q6YL49 198 aa9.61□□□□□ -0.87
CDT1-201ENST00000301019 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
CDT1-201ENST00000301019 PDE6GP18545 87 aa9.61□□□□□ -0.87
CDT1-201ENST00000301019 IGLV6-57P01721 117 aa9.6□□□□□ -0.87
CDT1-201ENST00000301019 SYCNQ0VAF6 134 aa9.59□□□□□ -0.87
CDT1-201ENST00000301019 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
CDT1-201ENST00000301019 Q6ZRU5 148 aa9.58□□□□□ -0.88
CDT1-201ENST00000301019 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
CDT1-201ENST00000301019 CCL24O00175 119 aa9.58□□□□□ -0.88
CDT1-201ENST00000301019 WFDC10BQ8IUB3 73 aa9.58□□□□□ -0.88
CDT1-201ENST00000301019 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
CDT1-201ENST00000301019 K7EQZ3 153 aa9.57□□□□□ -0.88
CDT1-201ENST00000301019 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
CDT1-201ENST00000301019 COX17Q14061 63 aa9.56□□□□□ -0.88
CDT1-201ENST00000301019 RBM12B-AS1Q9P1G2 102 aa9.56□□□□□ -0.88
CDT1-201ENST00000301019 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
CDT1-201ENST00000301019 RPL37AP8A6NKH3 93 aa9.55□□□□□ -0.88
CDT1-201ENST00000301019 C4orf3Q8WVX3 66 aa9.55□□□□□ -0.88
CDT1-201ENST00000301019 SMR3AQ99954 134 aa9.55□□□□□ -0.88
CDT1-201ENST00000301019 CD164Q04900 197 aa9.53□□□□□ -0.88
CDT1-201ENST00000301019 PSCAO43653 123 aa9.53□□□□□ -0.88
CDT1-201ENST00000301019 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
CDT1-201ENST00000301019 Q1T7F1 81 aa9.52□□□□□ -0.88
CDT1-201ENST00000301019 A6NED7 52 aa9.52□□□□□ -0.89
CDT1-201ENST00000301019 ELOF1P60002 83 aaKnown RBP9.52□□□□□ -0.89
CDT1-201ENST00000301019 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.89
CDT1-201ENST00000301019 C16orf90A8MZG2 172 aa9.51□□□□□ -0.89
CDT1-201ENST00000301019 FBN1P35555 2871 aaKnown RBP9.51□□□□□ -0.89
CDT1-201ENST00000301019 ERC2-IT1O76042 136 aa9.5□□□□□ -0.89
CDT1-201ENST00000301019 Q5VV11 94 aa9.5□□□□□ -0.89
CDT1-201ENST00000301019 A0A1B0GUV1 79 aa9.5□□□□□ -0.89
CDT1-201ENST00000301019 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
CDT1-201ENST00000301019 PRO0255Q9UI72 69 aa9.5□□□□□ -0.89
CDT1-201ENST00000301019 KPRPQ5T749 579 aaPredicted RBP9.5□□□□□ -0.89
CDT1-201ENST00000301019 FLNBO75369 2602 aaKnown RBP9.5□□□□□ -0.89
CDT1-201ENST00000301019 C11orf45Q8TAV5 145 aa9.49□□□□□ -0.89
CDT1-201ENST00000301019 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
CDT1-201ENST00000301019 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
CDT1-201ENST00000301019 ETDCA0A1B0GVM5 59 aa9.48□□□□□ -0.89
CDT1-201ENST00000301019 M0R378 163 aa9.48□□□□□ -0.89
CDT1-201ENST00000301019 CSNK1G2-AS1Q8NCQ2 148 aa9.48□□□□□ -0.89
CDT1-201ENST00000301019 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
CDT1-201ENST00000301019 ANK3Q12955 4377 aaKnown RBP9.46□□□□□ -0.89
CDT1-201ENST00000301019 Q8N377 158 aa9.46□□□□□ -0.89
CDT1-201ENST00000301019 UBE2BP63146 152 aa9.45□□□□□ -0.9
CDT1-201ENST00000301019 ATRQ13535 2644 aa9.45□□□□□ -0.9
CDT1-201ENST00000301019 C1orf137Q5JT78 98 aa9.44□□□□□ -0.9
CDT1-201ENST00000301019 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
CDT1-201ENST00000301019 TRRAPQ9Y4A5 3859 aa9.43□□□□□ -0.9
CDT1-201ENST00000301019 VPREB1P12018 145 aa9.43□□□□□ -0.9
CDT1-201ENST00000301019 DSCR10P59022 87 aa9.43□□□□□ -0.9
CDT1-201ENST00000301019 LCA10Q71F78 164 aa9.42□□□□□ -0.9
CDT1-201ENST00000301019 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
CDT1-201ENST00000301019 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
CDT1-201ENST00000301019 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
CDT1-201ENST00000301019 IGHV4-30-4P0DP06 118 aa9.41□□□□□ -0.9
CDT1-201ENST00000301019 KTN1-AS1Q86SY8 53 aa9.41□□□□□ -0.9
CDT1-201ENST00000301019 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
CDT1-201ENST00000301019 NKAPP1Q8N9T2 125 aa9.39□□□□□ -0.91
CDT1-201ENST00000301019 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
CDT1-201ENST00000301019 FAM168BA1KXE4 195 aa9.39□□□□□ -0.91
CDT1-201ENST00000301019 PCOTHQ58A44 107 aa9.39□□□□□ -0.91
CDT1-201ENST00000301019 A0A096LNI7 61 aa9.38□□□□□ -0.91
CDT1-201ENST00000301019 UBE2AP49459 152 aa9.38□□□□□ -0.91
CDT1-201ENST00000301019 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
CDT1-201ENST00000301019 SPAG11AQ6PDA7 123 aa9.38□□□□□ -0.91
CDT1-201ENST00000301019 MP68P56378 58 aa9.37□□□□□ -0.91
CDT1-201ENST00000301019 Q8N9P0 234 aaPredicted RBP9.37□□□□□ -0.91
CDT1-201ENST00000301019 NSD1Q96L73 2696 aaPredicted RBP9.37□□□□□ -0.91
CDT1-201ENST00000301019 TENM1Q9UKZ4 2725 aa9.36□□□□□ -0.91
CDT1-201ENST00000301019 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
CDT1-201ENST00000301019 ZCCHC13Q8WW36 166 aaKnown RBP9.36□□□□□ -0.91
CDT1-201ENST00000301019 APOC4P55056 127 aa9.35□□□□□ -0.91
CDT1-201ENST00000301019 PRAC1Q96KF2 57 aa9.35□□□□□ -0.91
CDT1-201ENST00000301019 X6R8D5 127 aa9.34□□□□□ -0.91
CDT1-201ENST00000301019 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
CDT1-201ENST00000301019 A0A087WSZ3 146 aa9.33□□□□□ -0.92
CDT1-201ENST00000301019 NOTCH1P46531 2555 aa9.32□□□□□ -0.92
CDT1-201ENST00000301019 H0Y9P7 68 aa9.31□□□□□ -0.92
CDT1-201ENST00000301019 COL6A5A8TX70 2615 aa9.31□□□□□ -0.92
CDT1-201ENST00000301019 H3BQ85 93 aa9.31□□□□□ -0.92
CDT1-201ENST00000301019 Q9BRP9 147 aa9.31□□□□□ -0.92
CDT1-201ENST00000301019 IGLV1-51P01701 117 aa9.3□□□□□ -0.92
CDT1-201ENST00000301019 Q8NBF4 154 aa9.29□□□□□ -0.92
CDT1-201ENST00000301019 TENM3Q9P273 2699 aa9.27□□□□□ -0.93
CDT1-201ENST00000301019 MAST4O15021 2626 aa9.27□□□□□ -0.93
CDT1-201ENST00000301019 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
CDT1-201ENST00000301019 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.93
CDT1-201ENST00000301019 IGLV5-48A0A075B6I7 105 aa9.25□□□□□ -0.93
CDT1-201ENST00000301019 COA5Q86WW8 74 aa9.25□□□□□ -0.93
CDT1-201ENST00000301019 NBEAL1Q6ZS30 2694 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms