RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 HINT1P49773 126 aaPredicted RBP3.35□□□□□ -1.87
PATL1-201ENST00000300146 COA6Q5JTJ3 125 aaKnown RBP3.35□□□□□ -1.87
PATL1-201ENST00000300146 PET117Q6UWS5 81 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 NPSP0C0P6 89 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 TP73-AS1Q9UF72 201 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 LEPROTO15243 131 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 ERC2-IT1O76042 136 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 LINC00304Q8N9R0 145 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 MUC2Q02817 5179 aa3.35□□□□□ -1.87
PATL1-201ENST00000300146 TRAV12-1A0A0B4J245 112 aa3.34□□□□□ -1.87
PATL1-201ENST00000300146 MOBPQ13875 183 aa3.34□□□□□ -1.87
PATL1-201ENST00000300146 ST20-AS1Q8NBB2 130 aa3.34□□□□□ -1.87
PATL1-201ENST00000300146 A0A0G2JQZ4 141 aa3.34□□□□□ -1.88
PATL1-201ENST00000300146 A0A0J9YXY3 114 aa3.34□□□□□ -1.88
PATL1-201ENST00000300146 C20orf202A1L168 122 aa3.34□□□□□ -1.88
PATL1-201ENST00000300146 RPL13AP40429 203 aaKnown RBP3.34□□□□□ -1.88
PATL1-201ENST00000300146 TAL2Q16559 108 aa3.34□□□□□ -1.88
PATL1-201ENST00000300146 FAM19A3Q7Z5A8 133 aa3.34□□□□□ -1.88
PATL1-201ENST00000300146 PCP2Q8IVA1 136 aa3.34□□□□□ -1.88
PATL1-201ENST00000300146 HERV-K104P63124 156 aa3.33□□□□□ -1.88
PATL1-201ENST00000300146 SOSTDC1Q6X4U4 206 aa3.33□□□□□ -1.88
PATL1-201ENST00000300146 A0A1B0GV72 72 aa3.33□□□□□ -1.88
PATL1-201ENST00000300146 TSTD3H0UI37 97 aa3.33□□□□□ -1.88
PATL1-201ENST00000300146 COX17Q14061 63 aa3.33□□□□□ -1.88
PATL1-201ENST00000300146 KRTAP13-2Q52LG2 175 aa3.33□□□□□ -1.88
PATL1-201ENST00000300146 C14orf144Q96I85 54 aa3.32□□□□□ -1.88
PATL1-201ENST00000300146 LCE2BO14633 110 aa3.32□□□□□ -1.88
PATL1-201ENST00000300146 Q8NBF4 154 aa3.32□□□□□ -1.88
PATL1-201ENST00000300146 HSBP1L1C9JCN9 74 aa3.32□□□□□ -1.88
PATL1-201ENST00000300146 SNRPEP62304 92 aaKnown RBP3.32□□□□□ -1.88
PATL1-201ENST00000300146 IGLV7-46A0A075B6I9 117 aa3.31□□□□□ -1.88
PATL1-201ENST00000300146 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
PATL1-201ENST00000300146 SFTA2Q6UW10 78 aa3.31□□□□□ -1.88
PATL1-201ENST00000300146 TRAV23DV6A0A075B6W5 121 aa3.31□□□□□ -1.88
PATL1-201ENST00000300146 LINC00337Q8N6G1 96 aa3.31□□□□□ -1.88
PATL1-201ENST00000300146 ZNF73O43830 326 aaPredicted RBP3.3□□□□□ -1.88
PATL1-201ENST00000300146 B5MCH6 92 aa3.3□□□□□ -1.88
PATL1-201ENST00000300146 E9PLD3 99 aa3.3□□□□□ -1.88
PATL1-201ENST00000300146 LINC00308Q8TCZ7 52 aa3.3□□□□□ -1.88
PATL1-201ENST00000300146 MUSTN1Q8IVN3 82 aa3.3□□□□□ -1.88
PATL1-201ENST00000300146 SPRR4Q96PI1 79 aa3.29□□□□□ -1.88
PATL1-201ENST00000300146 PRO1933Q9H354 126 aa3.29□□□□□ -1.88
PATL1-201ENST00000300146 C9orf92A6NGG3 77 aa3.29□□□□□ -1.88
PATL1-201ENST00000300146 SPANXB1Q9NS25 103 aaPredicted RBP3.29□□□□□ -1.88
PATL1-201ENST00000300146 PAM16Q9Y3D7 125 aa3.29□□□□□ -1.88
PATL1-201ENST00000300146 LINC01545Q5VT33 79 aa3.28□□□□□ -1.88
PATL1-201ENST00000300146 PRYO14603 147 aa3.28□□□□□ -1.88
PATL1-201ENST00000300146 Q9BRP9 147 aa3.28□□□□□ -1.88
PATL1-201ENST00000300146 HIST1H4GQ99525 98 aa3.28□□□□□ -1.89
PATL1-201ENST00000300146 SPANXCQ9NY87 97 aa3.27□□□□□ -1.89
PATL1-201ENST00000300146 ZNF706Q9Y5V0 76 aaPredicted RBP3.27□□□□□ -1.89
PATL1-201ENST00000300146 IGLV5-37A0A075B6J1 123 aa3.27□□□□□ -1.89
PATL1-201ENST00000300146 COX7BP24311 80 aa3.27□□□□□ -1.89
PATL1-201ENST00000300146 JOSD1Q15040 202 aaPredicted RBP3.27□□□□□ -1.89
PATL1-201ENST00000300146 A4D1N5 150 aa3.27□□□□□ -1.89
PATL1-201ENST00000300146 TRIAP1O43715 76 aa3.27□□□□□ -1.89
PATL1-201ENST00000300146 HIST1H2BLQ99880 126 aa3.27□□□□□ -1.89
PATL1-201ENST00000300146 KCNQ1DNQ9H478 68 aa3.27□□□□□ -1.89
PATL1-201ENST00000300146 Q6ZRX8 168 aa3.26□□□□□ -1.89
PATL1-201ENST00000300146 VPS25Q9BRG1 176 aa3.26□□□□□ -1.89
PATL1-201ENST00000300146 C5orf52A6NGY3 159 aa3.26□□□□□ -1.89
PATL1-201ENST00000300146 BATFQ16520 125 aa3.26□□□□□ -1.89
PATL1-201ENST00000300146 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
PATL1-201ENST00000300146 KRTAP13-1Q8IUC0 172 aa3.25□□□□□ -1.89
PATL1-201ENST00000300146 HIST3H2BBQ8N257 126 aa3.25□□□□□ -1.89
PATL1-201ENST00000300146 SLC25A20O43772 301 aa3.24□□□□□ -1.89
PATL1-201ENST00000300146 LAMTOR3Q9UHA4 124 aa3.24□□□□□ -1.89
PATL1-201ENST00000300146 PYY3Q5JQD4 70 aa3.24□□□□□ -1.89
PATL1-201ENST00000300146 DLEU1O43261 78 aa3.24□□□□□ -1.89
PATL1-201ENST00000300146 SMIM11BQ8TCY0 68 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 LITAFQ99732 161 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 M0R143 59 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 IGLV6-57P01721 117 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 VAMP3Q15836 100 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 RAB37Q96AX2 223 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 TRBV10-2A0A0K0K1G8 114 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 F8WEM9 126 aa3.23□□□□□ -1.89
PATL1-201ENST00000300146 H3BUT2 72 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 FABP2P12104 132 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 FAM229BQ4G0N7 80 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 Q6ZQY7 126 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 SPANXDQ9BXN6 97 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 SPATA45Q537H7 98 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 VAMP8Q9BV40 100 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 SNHG12Q9BXW3 62 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
PATL1-201ENST00000300146 NDUFC2O95298 119 aa3.21□□□□□ -1.9
PATL1-201ENST00000300146 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
PATL1-201ENST00000300146 KRTAP4-16G5E9R7 235 aaPredicted RBP3.21□□□□□ -1.9
PATL1-201ENST00000300146 SPRR1AP35321 89 aa3.21□□□□□ -1.9
PATL1-201ENST00000300146 NHP2Q9NX24 153 aaKnown RBP3.2□□□□□ -1.9
PATL1-201ENST00000300146 DHRS4-AS1Q9P1J3 65 aa3.2□□□□□ -1.9
PATL1-201ENST00000300146 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
PATL1-201ENST00000300146 PSMB2P49721 201 aa3.2□□□□□ -1.9
PATL1-201ENST00000300146 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
PATL1-201ENST00000300146 SLC25A34Q6PIV7 304 aa3.2□□□□□ -1.9
PATL1-201ENST00000300146 SPINK1P00995 79 aa3.2□□□□□ -1.9
PATL1-201ENST00000300146 Q6Q795 121 aa3.2□□□□□ -1.9
PATL1-201ENST00000300146 COPS9Q8WXC6 57 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms