RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 H0YGX0 51 aa13.02□□□□□ -0.33
PACSIN3-201ENST00000298838 UBE2BP63146 152 aa13.02□□□□□ -0.33
PACSIN3-201ENST00000298838 Q6ZSA8 131 aa13.02□□□□□ -0.33
PACSIN3-201ENST00000298838 K7EP34 96 aa13.01□□□□□ -0.33
PACSIN3-201ENST00000298838 FAM30AQ9NZY2 134 aa13.01□□□□□ -0.33
PACSIN3-201ENST00000298838 RYR3Q15413 4870 aa13□□□□□ -0.33
PACSIN3-201ENST00000298838 TCL1BO95988 128 aa13□□□□□ -0.33
PACSIN3-201ENST00000298838 GTF2H5Q6ZYL4 71 aa13□□□□□ -0.33
PACSIN3-201ENST00000298838 CLEC2BQ92478 149 aa13□□□□□ -0.33
PACSIN3-201ENST00000298838 TRBV7-6A0A0J9YX20 115 aa12.97□□□□□ -0.33
PACSIN3-201ENST00000298838 ATXN8Q156A1 80 aa12.97□□□□□ -0.33
PACSIN3-201ENST00000298838 REG3GQ6UW15 175 aa12.97□□□□□ -0.33
PACSIN3-201ENST00000298838 SPRR1AP35321 89 aa12.96□□□□□ -0.33
PACSIN3-201ENST00000298838 CIRBP-AS1Q8TBR5 109 aa12.96□□□□□ -0.33
PACSIN3-201ENST00000298838 LST1O00453 97 aa12.95□□□□□ -0.34
PACSIN3-201ENST00000298838 COX7BP24311 80 aa12.95□□□□□ -0.34
PACSIN3-201ENST00000298838 ELOF1P60002 83 aaKnown RBP12.95□□□□□ -0.34
PACSIN3-201ENST00000298838 PKHD1P08F94 4074 aa12.95□□□□□ -0.34
PACSIN3-201ENST00000298838 H3BMG7 143 aa12.95□□□□□ -0.34
PACSIN3-201ENST00000298838 FAM218AQ96MZ4 157 aa12.95□□□□□ -0.34
PACSIN3-201ENST00000298838 SCXQ7RTU7 201 aa12.94□□□□□ -0.34
PACSIN3-201ENST00000298838 ETDCA0A1B0GVM5 59 aa12.93□□□□□ -0.34
PACSIN3-201ENST00000298838 KRTAP11-1Q8IUC1 163 aa12.93□□□□□ -0.34
PACSIN3-201ENST00000298838 KRTAP4-16G5E9R7 235 aaPredicted RBP12.92□□□□□ -0.34
PACSIN3-201ENST00000298838 UBE2V1Q13404 147 aa12.92□□□□□ -0.34
PACSIN3-201ENST00000298838 SNCGO76070 127 aa12.9□□□□□ -0.34
PACSIN3-201ENST00000298838 TRACP01848 142 aa12.9□□□□□ -0.34
PACSIN3-201ENST00000298838 LINC00575Q6W349 94 aa12.9□□□□□ -0.34
PACSIN3-201ENST00000298838 Q6ZRX8 168 aa12.9□□□□□ -0.34
PACSIN3-201ENST00000298838 LINC00528Q8N1L1 170 aa12.9□□□□□ -0.34
PACSIN3-201ENST00000298838 A0A1B0GX51 115 aa12.89□□□□□ -0.35
PACSIN3-201ENST00000298838 B5MCH6 92 aa12.89□□□□□ -0.35
PACSIN3-201ENST00000298838 SLC25A20O43772 301 aa12.88□□□□□ -0.35
PACSIN3-201ENST00000298838 DNAL4O96015 105 aa12.88□□□□□ -0.35
PACSIN3-201ENST00000298838 HAMPP81172 84 aa12.88□□□□□ -0.35
PACSIN3-201ENST00000298838 DNAH8Q96JB1 4490 aa12.87□□□□□ -0.35
PACSIN3-201ENST00000298838 hADV29S1A0JD25 119 aa12.86□□□□□ -0.35
PACSIN3-201ENST00000298838 FAM19A1Q7Z5A9 133 aa12.86□□□□□ -0.35
PACSIN3-201ENST00000298838 C9JAW5 83 aa12.84□□□□□ -0.35
PACSIN3-201ENST00000298838 BCE1O60756 84 aa12.84□□□□□ -0.35
PACSIN3-201ENST00000298838 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.35
PACSIN3-201ENST00000298838 PSORS1C2Q9UIG4 136 aa12.83□□□□□ -0.35
PACSIN3-201ENST00000298838 PRLHP81277 87 aa12.83□□□□□ -0.36
PACSIN3-201ENST00000298838 MTURNQ8N3F0 131 aa12.83□□□□□ -0.36
PACSIN3-201ENST00000298838 LRP1BQ9NZR2 4599 aa12.83□□□□□ -0.36
PACSIN3-201ENST00000298838 DHRS4-AS1Q9P1J3 65 aa12.83□□□□□ -0.36
PACSIN3-201ENST00000298838 Q9BRP9 147 aa12.81□□□□□ -0.36
PACSIN3-201ENST00000298838 DYNC1H1Q14204 4646 aaKnown RBP12.81□□□□□ -0.36
PACSIN3-201ENST00000298838 H0Y9J4 135 aa12.8□□□□□ -0.36
PACSIN3-201ENST00000298838 UBE2AP49459 152 aa12.8□□□□□ -0.36
PACSIN3-201ENST00000298838 F8W1H4 67 aa12.78□□□□□ -0.36
PACSIN3-201ENST00000298838 C1orf137Q5JT78 98 aa12.78□□□□□ -0.36
PACSIN3-201ENST00000298838 PRO0461Q9UI25 63 aa12.78□□□□□ -0.36
PACSIN3-201ENST00000298838 Q6ZQY7 126 aa12.78□□□□□ -0.36
PACSIN3-201ENST00000298838 ORMDL1Q9P0S3 153 aa12.77□□□□□ -0.37
PACSIN3-201ENST00000298838 XGP55808 180 aa12.76□□□□□ -0.37
PACSIN3-201ENST00000298838 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.76□□□□□ -0.37
PACSIN3-201ENST00000298838 SMCR5Q8TEV8 140 aa12.76□□□□□ -0.37
PACSIN3-201ENST00000298838 HIGD2AQ9BW72 106 aa12.76□□□□□ -0.37
PACSIN3-201ENST00000298838 KRTAP13-1Q8IUC0 172 aa12.75□□□□□ -0.37
PACSIN3-201ENST00000298838 H3BT86 120 aa12.74□□□□□ -0.37
PACSIN3-201ENST00000298838 BAALC-AS2P0C853 105 aa12.74□□□□□ -0.37
PACSIN3-201ENST00000298838 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
PACSIN3-201ENST00000298838 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
PACSIN3-201ENST00000298838 ERC2-IT1O76042 136 aa12.72□□□□□ -0.37
PACSIN3-201ENST00000298838 OCIAD2Q56VL3 154 aa12.72□□□□□ -0.37
PACSIN3-201ENST00000298838 GHRHP01286 108 aa12.72□□□□□ -0.37
PACSIN3-201ENST00000298838 TMEM256-PLSCR3K7ERE1 68 aa12.69□□□□□ -0.38
PACSIN3-201ENST00000298838 IGLV7-43P04211 117 aa12.69□□□□□ -0.38
PACSIN3-201ENST00000298838 H3BQ85 93 aa12.69□□□□□ -0.38
PACSIN3-201ENST00000298838 ZNF861PO60384 105 aa12.69□□□□□ -0.38
PACSIN3-201ENST00000298838 LINC01600Q96MT4 127 aa12.69□□□□□ -0.38
PACSIN3-201ENST00000298838 ST20-AS1Q8NBB2 130 aa12.67□□□□□ -0.38
PACSIN3-201ENST00000298838 APOBP04114 4563 aaKnown RBP12.66□□□□□ -0.38
PACSIN3-201ENST00000298838 DEFB105AQ8NG35 78 aa12.65□□□□□ -0.38
PACSIN3-201ENST00000298838 IGLV5-48A0A075B6I7 105 aa12.64□□□□□ -0.39
PACSIN3-201ENST00000298838 ETDBQ3ZM63 59 aa12.64□□□□□ -0.39
PACSIN3-201ENST00000298838 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
PACSIN3-201ENST00000298838 PPDPFLQ8WWR9 84 aa12.63□□□□□ -0.39
PACSIN3-201ENST00000298838 CDK2AP2O75956 126 aa12.62□□□□□ -0.39
PACSIN3-201ENST00000298838 LINC01547P58512 204 aaPredicted RBP12.62□□□□□ -0.39
PACSIN3-201ENST00000298838 RPL37AP61513 92 aaKnown RBP12.62□□□□□ -0.39
PACSIN3-201ENST00000298838 TEN1Q86WV5 123 aa12.62□□□□□ -0.39
PACSIN3-201ENST00000298838 SRRM2Q9UQ35 2752 aaKnown RBP12.62□□□□□ -0.39
PACSIN3-201ENST00000298838 Q8N377 158 aa12.61□□□□□ -0.39
PACSIN3-201ENST00000298838 TEX49A0A1B0GTD5 131 aa12.6□□□□□ -0.39
PACSIN3-201ENST00000298838 LAMTOR3Q9UHA4 124 aa12.58□□□□□ -0.4
PACSIN3-201ENST00000298838 ZNF706Q9Y5V0 76 aaPredicted RBP12.58□□□□□ -0.4
PACSIN3-201ENST00000298838 GAGE2AQ6NT46 116 aa12.56□□□□□ -0.4
PACSIN3-201ENST00000298838 NDUFV3P56181 108 aaKnown RBP12.55□□□□□ -0.4
PACSIN3-201ENST00000298838 SPRR4Q96PI1 79 aa12.55□□□□□ -0.4
PACSIN3-201ENST00000298838 VPS13BQ7Z7G8 4022 aa12.54□□□□□ -0.4
PACSIN3-201ENST00000298838 A0A1B0GV72 72 aa12.53□□□□□ -0.4
PACSIN3-201ENST00000298838 JMJD7-PLA2G4BH0Y9G9 81 aa12.53□□□□□ -0.4
PACSIN3-201ENST00000298838 SPRR1BP22528 89 aa12.53□□□□□ -0.4
PACSIN3-201ENST00000298838 C3orf22Q8N5N4 141 aa12.53□□□□□ -0.4
PACSIN3-201ENST00000298838 EPPK1P58107 5090 aaKnown RBP12.52□□□□□ -0.41
PACSIN3-201ENST00000298838 OBSCN-AS1Q96MR7 158 aa12.51□□□□□ -0.41
PACSIN3-201ENST00000298838 SMIM29Q86T20 159 aa12.5□□□□□ -0.41
PACSIN3-201ENST00000298838 LINC00483Q53H64 154 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms