RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 CRYGAP11844 174 aa12.88□□□□□ -0.35
NFIL3-201ENST00000297689 KCNQ1DNQ9H478 68 aa12.88□□□□□ -0.35
NFIL3-201ENST00000297689 FAM19A1Q7Z5A9 133 aa12.87□□□□□ -0.35
NFIL3-201ENST00000297689 PLA2G2DQ9UNK4 145 aa12.86□□□□□ -0.35
NFIL3-201ENST00000297689 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
NFIL3-201ENST00000297689 SERP2Q8N6R1 65 aa12.85□□□□□ -0.35
NFIL3-201ENST00000297689 Q6ZVQ6 151 aa12.84□□□□□ -0.35
NFIL3-201ENST00000297689 DNAH9Q9NYC9 4486 aa12.84□□□□□ -0.35
NFIL3-201ENST00000297689 C7orf33Q8WU49 177 aa12.83□□□□□ -0.36
NFIL3-201ENST00000297689 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
NFIL3-201ENST00000297689 UPK3BQ9BT76 320 aa12.82□□□□□ -0.36
NFIL3-201ENST00000297689 LINC01547P58512 204 aaPredicted RBP12.82□□□□□ -0.36
NFIL3-201ENST00000297689 IGLV5-37A0A075B6J1 123 aa12.81□□□□□ -0.36
NFIL3-201ENST00000297689 NKAPP1Q8N9T2 125 aa12.79□□□□□ -0.36
NFIL3-201ENST00000297689 KRTAP4-16G5E9R7 235 aaPredicted RBP12.78□□□□□ -0.36
NFIL3-201ENST00000297689 COL7A1Q02388 2944 aa12.78□□□□□ -0.36
NFIL3-201ENST00000297689 KRTAP7-1Q8IUC3 87 aa12.77□□□□□ -0.36
NFIL3-201ENST00000297689 CXCL6P80162 114 aa12.77□□□□□ -0.37
NFIL3-201ENST00000297689 CYSTM1Q9H1C7 97 aa12.77□□□□□ -0.37
NFIL3-201ENST00000297689 SPRR1AP35321 89 aa12.76□□□□□ -0.37
NFIL3-201ENST00000297689 IGLV1-50A0A075B6I6 118 aa12.74□□□□□ -0.37
NFIL3-201ENST00000297689 BCE1O60756 84 aa12.73□□□□□ -0.37
NFIL3-201ENST00000297689 HAMPP81172 84 aa12.73□□□□□ -0.37
NFIL3-201ENST00000297689 RMI2Q96E14 147 aa12.73□□□□□ -0.37
NFIL3-201ENST00000297689 FAM168BA1KXE4 195 aa12.73□□□□□ -0.37
NFIL3-201ENST00000297689 Q8N377 158 aa12.73□□□□□ -0.37
NFIL3-201ENST00000297689 STAB2Q8WWQ8 2551 aa12.72□□□□□ -0.37
NFIL3-201ENST00000297689 MEGF8Q7Z7M0 2845 aa12.72□□□□□ -0.37
NFIL3-201ENST00000297689 Q6ZRX8 168 aa12.71□□□□□ -0.37
NFIL3-201ENST00000297689 PRYO14603 147 aa12.71□□□□□ -0.38
NFIL3-201ENST00000297689 SMIM20Q8N5G0 67 aa12.71□□□□□ -0.38
NFIL3-201ENST00000297689 IGLV5-48A0A075B6I7 105 aa12.69□□□□□ -0.38
NFIL3-201ENST00000297689 Q9BRP9 147 aa12.69□□□□□ -0.38
NFIL3-201ENST00000297689 DHRS4-AS1Q9P1J3 65 aa12.69□□□□□ -0.38
NFIL3-201ENST00000297689 DYNC2H1Q8NCM8 4307 aaKnown RBP12.69□□□□□ -0.38
NFIL3-201ENST00000297689 PRKDCP78527 4128 aaKnown RBP12.68□□□□□ -0.38
NFIL3-201ENST00000297689 RPL37AP8A6NKH3 93 aa12.68□□□□□ -0.38
NFIL3-201ENST00000297689 B9D2Q9BPU9 175 aa12.68□□□□□ -0.38
NFIL3-201ENST00000297689 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.39
NFIL3-201ENST00000297689 TNP2Q05952 138 aa12.63□□□□□ -0.39
NFIL3-201ENST00000297689 MRPL55Q7Z7F7 128 aaKnown RBP12.63□□□□□ -0.39
NFIL3-201ENST00000297689 DEFB105AQ8NG35 78 aa12.62□□□□□ -0.39
NFIL3-201ENST00000297689 KRTAP1-5Q9BYS1 174 aa12.62□□□□□ -0.39
NFIL3-201ENST00000297689 TRAV7A0A075B6U4 112 aa12.61□□□□□ -0.39
NFIL3-201ENST00000297689 ETDCA0A1B0GVM5 59 aa12.61□□□□□ -0.39
NFIL3-201ENST00000297689 TMEM258P61165 79 aa12.6□□□□□ -0.39
NFIL3-201ENST00000297689 APLNQ9ULZ1 77 aa12.6□□□□□ -0.39
NFIL3-201ENST00000297689 SCXQ7RTU7 201 aa12.6□□□□□ -0.39
NFIL3-201ENST00000297689 FAM19A5Q7Z5A7 132 aaPredicted RBP12.59□□□□□ -0.39
NFIL3-201ENST00000297689 DNAH10Q8IVF4 4471 aa12.58□□□□□ -0.4
NFIL3-201ENST00000297689 ST20-AS1Q8NBB2 130 aa12.58□□□□□ -0.4
NFIL3-201ENST00000297689 LYSTQ99698 3801 aa12.57□□□□□ -0.4
NFIL3-201ENST00000297689 A0A1B0GW54 56 aa12.57□□□□□ -0.4
NFIL3-201ENST00000297689 ERC2-IT1O76042 136 aa12.57□□□□□ -0.4
NFIL3-201ENST00000297689 CNBPP62633 177 aaKnown RBP12.57□□□□□ -0.4
NFIL3-201ENST00000297689 RPS28P62857 69 aaKnown RBP12.56□□□□□ -0.4
NFIL3-201ENST00000297689 A0A1W2PNM2 257 aa12.55□□□□□ -0.4
NFIL3-201ENST00000297689 NREPQ16612 68 aa12.55□□□□□ -0.4
NFIL3-201ENST00000297689 IGKV4-1P06312 121 aa12.53□□□□□ -0.4
NFIL3-201ENST00000297689 REG3GQ6UW15 175 aa12.53□□□□□ -0.4
NFIL3-201ENST00000297689 C20orf197Q8N268 126 aa12.53□□□□□ -0.4
NFIL3-201ENST00000297689 C16orf90A8MZG2 172 aa12.52□□□□□ -0.4
NFIL3-201ENST00000297689 A0A096LNI7 61 aa12.52□□□□□ -0.41
NFIL3-201ENST00000297689 C3orf84H3BNL1 204 aa12.52□□□□□ -0.41
NFIL3-201ENST00000297689 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
NFIL3-201ENST00000297689 DPH3Q96FX2 82 aa12.51□□□□□ -0.41
NFIL3-201ENST00000297689 PLECQ15149 4684 aaKnown RBP12.51□□□□□ -0.41
NFIL3-201ENST00000297689 C1orf137Q5JT78 98 aa12.5□□□□□ -0.41
NFIL3-201ENST00000297689 KLKP1Q107X0 134 aa12.5□□□□□ -0.41
NFIL3-201ENST00000297689 SMIM29Q86T20 159 aa12.5□□□□□ -0.41
NFIL3-201ENST00000297689 SPRR4Q96PI1 79 aa12.5□□□□□ -0.41
NFIL3-201ENST00000297689 FBN3Q75N90 2809 aa12.49□□□□□ -0.41
NFIL3-201ENST00000297689 J3KT08 172 aa12.49□□□□□ -0.41
NFIL3-201ENST00000297689 A0A1W2PNN7 141 aa12.49□□□□□ -0.41
NFIL3-201ENST00000297689 UBE2DNLQ8IWF7 75 aa12.49□□□□□ -0.41
NFIL3-201ENST00000297689 Q8N9L7 120 aa12.49□□□□□ -0.41
NFIL3-201ENST00000297689 Q8NBF4 154 aa12.49□□□□□ -0.41
NFIL3-201ENST00000297689 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■□□□□ 10.5
NFIL3-201ENST00000297689 UBE2BP63146 152 aa12.47□□□□□ -0.41
NFIL3-201ENST00000297689 BPY2O14599 106 aa12.47□□□□□ -0.41
NFIL3-201ENST00000297689 DNAH7Q8WXX0 4024 aa12.46□□□□□ -0.41
NFIL3-201ENST00000297689 H7BZZ5 65 aa12.46□□□□□ -0.42
NFIL3-201ENST00000297689 IGKV2-24A0A0C4DH68 120 aa12.42□□□□□ -0.42
NFIL3-201ENST00000297689 PSCAO43653 123 aa12.41□□□□□ -0.42
NFIL3-201ENST00000297689 NUPR2A6NF83 97 aa12.41□□□□□ -0.42
NFIL3-201ENST00000297689 C14orf177Q52M58 125 aa12.4□□□□□ -0.42
NFIL3-201ENST00000297689 SVIPQ8NHG7 77 aa12.4□□□□□ -0.42
NFIL3-201ENST00000297689 VPS13DQ5THJ4 4388 aa12.4□□□□□ -0.42
NFIL3-201ENST00000297689 TENM2Q9NT68 2774 aa12.4□□□□□ -0.42
NFIL3-201ENST00000297689 OXTP01178 125 aa12.39□□□□□ -0.43
NFIL3-201ENST00000297689 OCR1Q9BZK8 76 aa12.39□□□□□ -0.43
NFIL3-201ENST00000297689 STARD9Q9P2P6 4700 aa12.39□□□□□ -0.43
NFIL3-201ENST00000297689 IGLV8-61A0A075B6I0 122 aa12.38□□□□□ -0.43
NFIL3-201ENST00000297689 LINC00476Q8WZB0 136 aa12.38□□□□□ -0.43
NFIL3-201ENST00000297689 LRCOL1A6NCL2 159 aa12.38□□□□□ -0.43
NFIL3-201ENST00000297689 PRLHP81277 87 aa12.37□□□□□ -0.43
NFIL3-201ENST00000297689 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
NFIL3-201ENST00000297689 TGP01266 2768 aa12.37□□□□□ -0.43
NFIL3-201ENST00000297689 SNURFQ9Y675 71 aa12.36□□□□□ -0.43
NFIL3-201ENST00000297689 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 272.8 ms