RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 OBSCN-AS1Q96MR7 158 aa10.74□□□□□ -0.69
SSRP1-202ENST00000293880 ANAPC11Q9NYG5 84 aa10.73□□□□□ -0.69
SSRP1-202ENST00000293880 IGLV1-50A0A075B6I6 118 aa10.72□□□□□ -0.69
SSRP1-202ENST00000293880 MTORP42345 2549 aa10.7□□□□□ -0.7
SSRP1-202ENST00000293880 A0A1B0GW54 56 aa10.7□□□□□ -0.7
SSRP1-202ENST00000293880 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
SSRP1-202ENST00000293880 RBM12B-AS1Q9P1G2 102 aa10.7□□□□□ -0.7
SSRP1-202ENST00000293880 H3BNG1 76 aa10.69□□□□□ -0.7
SSRP1-202ENST00000293880 LUZP6Q538Z0 58 aa10.69□□□□□ -0.7
SSRP1-202ENST00000293880 ERC2-IT1O76042 136 aa10.68□□□□□ -0.7
SSRP1-202ENST00000293880 KLKP1Q107X0 134 aa10.67□□□□□ -0.7
SSRP1-202ENST00000293880 PRR15Q8IV56 129 aa10.67□□□□□ -0.7
SSRP1-202ENST00000293880 C8orf17Q9NRJ1 99 aa10.66□□□□□ -0.7
SSRP1-202ENST00000293880 C15orf56Q8N910 161 aa10.66□□□□□ -0.7
SSRP1-202ENST00000293880 ACANP16112 2415 aa10.66□□□□□ -0.7
SSRP1-202ENST00000293880 EPG5Q9HCE0 2579 aa10.66□□□□□ -0.7
SSRP1-202ENST00000293880 PKD1L2Q7Z442 2459 aa10.64□□□□□ -0.71
SSRP1-202ENST00000293880 COX6B2Q6YFQ2 88 aa10.64□□□□□ -0.71
SSRP1-202ENST00000293880 PRAC1Q96KF2 57 aa10.63□□□□□ -0.71
SSRP1-202ENST00000293880 ANKRD17O75179 2603 aaKnown RBP10.63□□□□□ -0.71
SSRP1-202ENST00000293880 DNAH12Q6ZR08 3092 aa10.62□□□□□ -0.71
SSRP1-202ENST00000293880 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
SSRP1-202ENST00000293880 J3QL48 77 aa10.6□□□□□ -0.71
SSRP1-202ENST00000293880 Q8N377 158 aa10.6□□□□□ -0.71
SSRP1-202ENST00000293880 Q8N1X5 172 aa10.6□□□□□ -0.71
SSRP1-202ENST00000293880 KCNQ1DNQ9H478 68 aa10.59□□□□□ -0.71
SSRP1-202ENST00000293880 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
SSRP1-202ENST00000293880 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
SSRP1-202ENST00000293880 LINC00528Q8N1L1 170 aa10.59□□□□□ -0.71
SSRP1-202ENST00000293880 A0A1B0GVX0 72 aa10.58□□□□□ -0.72
SSRP1-202ENST00000293880 IGLV5-48A0A075B6I7 105 aa10.56□□□□□ -0.72
SSRP1-202ENST00000293880 F8P00451 2351 aa10.56□□□□□ -0.72
SSRP1-202ENST00000293880 LINC00304Q8N9R0 145 aa10.54□□□□□ -0.72
SSRP1-202ENST00000293880 CSNK1G2-AS1Q8NCQ2 148 aa10.54□□□□□ -0.72
SSRP1-202ENST00000293880 PCSK5Q92824 1860 aa10.54□□□□□ -0.72
SSRP1-202ENST00000293880 FLNBO75369 2602 aaKnown RBP10.53□□□□□ -0.72
SSRP1-202ENST00000293880 CASC10Q5T4H9 136 aa10.5□□□□□ -0.73
SSRP1-202ENST00000293880 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
SSRP1-202ENST00000293880 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
SSRP1-202ENST00000293880 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
SSRP1-202ENST00000293880 WWC2-AS2Q96NR7 200 aa10.49□□□□□ -0.73
SSRP1-202ENST00000293880 KRTAP10-3P60369 221 aa10.48□□□□□ -0.73
SSRP1-202ENST00000293880 IGLV5-37A0A075B6J1 123 aa10.48□□□□□ -0.73
SSRP1-202ENST00000293880 Q1T7F1 81 aa10.47□□□□□ -0.73
SSRP1-202ENST00000293880 FAM229BQ4G0N7 80 aa10.47□□□□□ -0.73
SSRP1-202ENST00000293880 HECTD1Q9ULT8 2610 aa10.47□□□□□ -0.73
SSRP1-202ENST00000293880 ZNF861PO60384 105 aa10.45□□□□□ -0.74
SSRP1-202ENST00000293880 K7EIL1 84 aa10.42□□□□□ -0.74
SSRP1-202ENST00000293880 CEP350Q5VT06 3117 aa10.41□□□□□ -0.74
SSRP1-202ENST00000293880 CSAG1Q6PB30 78 aa10.41□□□□□ -0.74
SSRP1-202ENST00000293880 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
SSRP1-202ENST00000293880 A0A1W2PNM2 257 aa10.38□□□□□ -0.75
SSRP1-202ENST00000293880 PLA2G2DQ9UNK4 145 aa10.38□□□□□ -0.75
SSRP1-202ENST00000293880 A0A087WTM6 91 aa10.38□□□□□ -0.75
SSRP1-202ENST00000293880 PRR34Q9NV39 138 aa10.38□□□□□ -0.75
SSRP1-202ENST00000293880 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
SSRP1-202ENST00000293880 IGLV7-43P04211 117 aa10.36□□□□□ -0.75
SSRP1-202ENST00000293880 Q5XG85 94 aa10.36□□□□□ -0.75
SSRP1-202ENST00000293880 A0A0A0MQY5 61 aa10.33□□□□□ -0.76
SSRP1-202ENST00000293880 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
SSRP1-202ENST00000293880 SPANXA2-OT1Q8N9U9 137 aa10.32□□□□□ -0.76
SSRP1-202ENST00000293880 KLK9Q2XQG4 91 aa10.3□□□□□ -0.76
SSRP1-202ENST00000293880 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
SSRP1-202ENST00000293880 C5orf42Q9H799 3197 aa10.29□□□□□ -0.76
SSRP1-202ENST00000293880 PRRC2CQ9Y520 2896 aaKnown RBP10.29□□□□□ -0.76
SSRP1-202ENST00000293880 PCNTO95613 3336 aa10.28□□□□□ -0.76
SSRP1-202ENST00000293880 TLX1NBP0CAT3 122 aa10.28□□□□□ -0.76
SSRP1-202ENST00000293880 CYSTM1Q9H1C7 97 aa10.28□□□□□ -0.76
SSRP1-202ENST00000293880 LINC00483Q53H64 154 aa10.27□□□□□ -0.77
SSRP1-202ENST00000293880 A0A1B0GU33 70 aa10.26□□□□□ -0.77
SSRP1-202ENST00000293880 Q75L30 129 aa10.26□□□□□ -0.77
SSRP1-202ENST00000293880 CAMK2N1Q7Z7J9 78 aa10.25□□□□□ -0.77
SSRP1-202ENST00000293880 A0A096LNT2 108 aa10.24□□□□□ -0.77
SSRP1-202ENST00000293880 FP248Q71RG6 208 aaPredicted RBP10.23□□□□□ -0.77
SSRP1-202ENST00000293880 OCR1Q9BZK8 76 aa10.22□□□□□ -0.77
SSRP1-202ENST00000293880 SPINK7P58062 85 aa10.2□□□□□ -0.78
SSRP1-202ENST00000293880 MGAM2Q2M2H8 2515 aa10.2□□□□□ -0.78
SSRP1-202ENST00000293880 USP24Q9UPU5 2620 aa10.19□□□□□ -0.78
SSRP1-202ENST00000293880 LINC00612Q8N6U2 182 aa10.18□□□□□ -0.78
SSRP1-202ENST00000293880 KRTAP1-3Q8IUG1 177 aa10.17□□□□□ -0.78
SSRP1-202ENST00000293880 CNBPP62633 177 aaKnown RBP10.16□□□□□ -0.78
SSRP1-202ENST00000293880 HRES1P13985 223 aa10.15□□□□□ -0.78
SSRP1-202ENST00000293880 Q5VV11 94 aa10.15□□□□□ -0.78
SSRP1-202ENST00000293880 Q8N9P0 234 aaPredicted RBP10.15□□□□□ -0.79
SSRP1-202ENST00000293880 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
SSRP1-202ENST00000293880 CHD7Q9P2D1 2997 aa10.11□□□□□ -0.79
SSRP1-202ENST00000293880 KRTAP1-1Q07627 177 aa10.1□□□□□ -0.79
SSRP1-202ENST00000293880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.09□□□□□ -0.79
SSRP1-202ENST00000293880 Q6ZSA8 131 aa10.09□□□□□ -0.79
SSRP1-202ENST00000293880 LINC01558Q9Y6Z2 57 aa10.07□□□□□ -0.8
SSRP1-202ENST00000293880 RANBP2P49792 3224 aaKnown RBP10.07□□□□□ -0.8
SSRP1-202ENST00000293880 HELZ2Q9BYK8 2649 aaKnown RBP10.07□□□□□ -0.8
SSRP1-202ENST00000293880 DMAC1Q96GE9 116 aa10.07□□□□□ -0.8
SSRP1-202ENST00000293880 TNP2Q05952 138 aa10.06□□□□□ -0.8
SSRP1-202ENST00000293880 BPTFQ12830 3046 aa10.06□□□□□ -0.8
SSRP1-202ENST00000293880 MKI67P46013 3256 aaKnown RBP10.04□□□□□ -0.8
SSRP1-202ENST00000293880 OXTP01178 125 aa10.03□□□□□ -0.8
SSRP1-202ENST00000293880 M0R2T5 61 aa10.02□□□□□ -0.81
SSRP1-202ENST00000293880 LAMA3Q16787 3333 aa10.02□□□□□ -0.81
SSRP1-202ENST00000293880 S4R3F8 94 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms