RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 PSCAO43653 123 aa11.01□□□□□ -0.65
CPSF4-201ENST00000292476 LOC110117498A0A087WWA1 95 aa11□□□□□ -0.65
CPSF4-201ENST00000292476 USP17L23D6RBM5 183 aa11□□□□□ -0.65
CPSF4-201ENST00000292476 ATOX1O00244 68 aa10.99□□□□□ -0.65
CPSF4-201ENST00000292476 SYCNQ0VAF6 134 aa10.99□□□□□ -0.65
CPSF4-201ENST00000292476 TRBV10-3A0A0K0K1G6 114 aa10.98□□□□□ -0.65
CPSF4-201ENST00000292476 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
CPSF4-201ENST00000292476 VPREB1P12018 145 aa10.98□□□□□ -0.65
CPSF4-201ENST00000292476 PDE6GP18545 87 aa10.98□□□□□ -0.65
CPSF4-201ENST00000292476 C14orf177Q52M58 125 aa10.98□□□□□ -0.65
CPSF4-201ENST00000292476 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
CPSF4-201ENST00000292476 M0R378 163 aa10.97□□□□□ -0.65
CPSF4-201ENST00000292476 RBM3P98179 157 aaKnown RBP10.97□□□□□ -0.65
CPSF4-201ENST00000292476 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-201ENST00000292476 Q6ZRU5 148 aa10.97□□□□□ -0.65
CPSF4-201ENST00000292476 UQCRQO14949 82 aa10.96□□□□□ -0.65
CPSF4-201ENST00000292476 ZNF73O43830 326 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-201ENST00000292476 COX7BP24311 80 aa10.95□□□□□ -0.66
CPSF4-201ENST00000292476 ELOF1P60002 83 aaKnown RBP10.95□□□□□ -0.66
CPSF4-201ENST00000292476 Q6ZQT0 140 aa10.95□□□□□ -0.66
CPSF4-201ENST00000292476 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
CPSF4-201ENST00000292476 XAGE1AQ9HD64 81 aa10.95□□□□□ -0.66
CPSF4-201ENST00000292476 IGKV3D-7A0A0C4DH55 119 aa10.93□□□□□ -0.66
CPSF4-201ENST00000292476 Q6ZQY7 126 aa10.93□□□□□ -0.66
CPSF4-201ENST00000292476 UBL5Q9BZL1 73 aa10.93□□□□□ -0.66
CPSF4-201ENST00000292476 SS18L2Q9UHA2 77 aa10.93□□□□□ -0.66
CPSF4-201ENST00000292476 VPS13DQ5THJ4 4388 aa10.93□□□□□ -0.66
CPSF4-201ENST00000292476 KMT2AQ03164 3969 aa10.93□□□□□ -0.66
CPSF4-201ENST00000292476 COX7CP15954 63 aa10.92□□□□□ -0.66
CPSF4-201ENST00000292476 LAMTOR3Q9UHA4 124 aa10.92□□□□□ -0.66
CPSF4-201ENST00000292476 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
CPSF4-201ENST00000292476 DSCR8Q96T75 97 aa10.9□□□□□ -0.66
CPSF4-201ENST00000292476 C9orf153Q5TBE3 101 aa10.88□□□□□ -0.67
CPSF4-201ENST00000292476 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
CPSF4-201ENST00000292476 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
CPSF4-201ENST00000292476 LINC00528Q8N1L1 170 aa10.86□□□□□ -0.67
CPSF4-201ENST00000292476 PLA2G2DQ9UNK4 145 aa10.86□□□□□ -0.67
CPSF4-201ENST00000292476 CRYGAP11844 174 aa10.85□□□□□ -0.67
CPSF4-201ENST00000292476 Q6ZR54 194 aa10.85□□□□□ -0.67
CPSF4-201ENST00000292476 Q6ZRP5 223 aa10.85□□□□□ -0.67
CPSF4-201ENST00000292476 TRBV7-4A0A0J9YYF1 115 aa10.85□□□□□ -0.67
CPSF4-201ENST00000292476 LOC107984640A0A0U1RRK4 108 aa10.85□□□□□ -0.67
CPSF4-201ENST00000292476 M0R2N4 97 aa10.84□□□□□ -0.67
CPSF4-201ENST00000292476 Q6ZRN7 208 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-201ENST00000292476 SERP2Q8N6R1 65 aa10.84□□□□□ -0.67
CPSF4-201ENST00000292476 DNAH6Q9C0G6 4158 aa10.83□□□□□ -0.68
CPSF4-201ENST00000292476 KCNQ1DNQ9H478 68 aa10.83□□□□□ -0.68
CPSF4-201ENST00000292476 A0A087WVE0 104 aa10.82□□□□□ -0.68
CPSF4-201ENST00000292476 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
CPSF4-201ENST00000292476 BCE1O60756 84 aa10.82□□□□□ -0.68
CPSF4-201ENST00000292476 IGLV5-37A0A075B6J1 123 aa10.81□□□□□ -0.68
CPSF4-201ENST00000292476 C1orf134Q5TEV5 83 aa10.8□□□□□ -0.68
CPSF4-201ENST00000292476 NKAPP1Q8N9T2 125 aa10.8□□□□□ -0.68
CPSF4-201ENST00000292476 CXCL6P80162 114 aa10.79□□□□□ -0.68
CPSF4-201ENST00000292476 Q6ZVQ6 151 aa10.79□□□□□ -0.68
CPSF4-201ENST00000292476 LINC01547P58512 204 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-201ENST00000292476 PRYO14603 147 aa10.76□□□□□ -0.69
CPSF4-201ENST00000292476 C7orf33Q8WU49 177 aa10.76□□□□□ -0.69
CPSF4-201ENST00000292476 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-201ENST00000292476 C16orf90A8MZG2 172 aa10.75□□□□□ -0.69
CPSF4-201ENST00000292476 FAM19A1Q7Z5A9 133 aa10.75□□□□□ -0.69
CPSF4-201ENST00000292476 C9orf163Q8N9P6 203 aa10.75□□□□□ -0.69
CPSF4-201ENST00000292476 A0A087WTM6 91 aa10.74□□□□□ -0.69
CPSF4-201ENST00000292476 DHRS4-AS1Q9P1J3 65 aa10.74□□□□□ -0.69
CPSF4-201ENST00000292476 DNAH10Q8IVF4 4471 aa10.74□□□□□ -0.69
CPSF4-201ENST00000292476 FRAS1Q86XX4 4008 aa10.74□□□□□ -0.69
CPSF4-201ENST00000292476 EPPK1P58107 5090 aaKnown RBP10.74□□□□□ -0.69
CPSF4-201ENST00000292476 SERTAD4-AS1Q5TG53 156 aa10.73□□□□□ -0.69
CPSF4-201ENST00000292476 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
CPSF4-201ENST00000292476 LINC00474Q9P2X8 69 aa10.73□□□□□ -0.69
CPSF4-201ENST00000292476 SPRR1AP35321 89 aa10.71□□□□□ -0.69
CPSF4-201ENST00000292476 DNAH2Q9P225 4427 aa10.7□□□□□ -0.7
CPSF4-201ENST00000292476 HAMPP81172 84 aa10.7□□□□□ -0.7
CPSF4-201ENST00000292476 A0A1B0GW54 56 aa10.69□□□□□ -0.7
CPSF4-201ENST00000292476 Q6ZRX8 168 aa10.69□□□□□ -0.7
CPSF4-201ENST00000292476 IGLV1-50A0A075B6I6 118 aa10.69□□□□□ -0.7
CPSF4-201ENST00000292476 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-201ENST00000292476 TMEM258P61165 79 aa10.68□□□□□ -0.7
CPSF4-201ENST00000292476 A0A096LNI7 61 aa10.67□□□□□ -0.7
CPSF4-201ENST00000292476 RTL8CO15255 209 aa10.67□□□□□ -0.7
CPSF4-201ENST00000292476 IGLV5-48A0A075B6I7 105 aa10.66□□□□□ -0.7
CPSF4-201ENST00000292476 TRAV7A0A075B6U4 112 aa10.66□□□□□ -0.7
CPSF4-201ENST00000292476 ETDCA0A1B0GVM5 59 aa10.65□□□□□ -0.7
CPSF4-201ENST00000292476 MRPL55Q7Z7F7 128 aaKnown RBP10.65□□□□□ -0.7
CPSF4-201ENST00000292476 Q8N377 158 aa10.65□□□□□ -0.7
CPSF4-201ENST00000292476 IGKV2-24A0A0C4DH68 120 aa10.64□□□□□ -0.71
CPSF4-201ENST00000292476 FAM19A5Q7Z5A7 132 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-201ENST00000292476 FAM168BA1KXE4 195 aa10.63□□□□□ -0.71
CPSF4-201ENST00000292476 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
CPSF4-201ENST00000292476 FAT2Q9NYQ8 4349 aa10.62□□□□□ -0.71
CPSF4-201ENST00000292476 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
CPSF4-201ENST00000292476 Q9BRP9 147 aa10.61□□□□□ -0.71
CPSF4-201ENST00000292476 DNAH17Q9UFH2 4485 aa10.61□□□□□ -0.71
CPSF4-201ENST00000292476 KRTAP7-1Q8IUC3 87 aa10.6□□□□□ -0.71
CPSF4-201ENST00000292476 IGLV5-52A0A0A0MRZ9 124 aa10.6□□□□□ -0.71
CPSF4-201ENST00000292476 CYSTM1Q9H1C7 97 aa10.6□□□□□ -0.71
CPSF4-201ENST00000292476 BIRC6Q9NR09 4857 aa10.59□□□□□ -0.71
CPSF4-201ENST00000292476 RPL37AP8A6NKH3 93 aa10.59□□□□□ -0.71
CPSF4-201ENST00000292476 J3KT08 172 aa10.59□□□□□ -0.71
CPSF4-201ENST00000292476 TNP2Q05952 138 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms