RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 Q6ZRP5 223 aa5.37□□□□□ -1.55
TFF1-201ENST00000291527 LINC00308Q8TCZ7 52 aa5.37□□□□□ -1.55
TFF1-201ENST00000291527 ZNF561-AS1K7EIQ3 104 aa5.36□□□□□ -1.55
TFF1-201ENST00000291527 COX7A2LO14548 114 aa5.36□□□□□ -1.55
TFF1-201ENST00000291527 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
TFF1-201ENST00000291527 H3BMG7 143 aa5.35□□□□□ -1.55
TFF1-201ENST00000291527 MALP21145 153 aa5.35□□□□□ -1.55
TFF1-201ENST00000291527 CKS1BP61024 79 aa5.35□□□□□ -1.55
TFF1-201ENST00000291527 REG3GQ6UW15 175 aa5.35□□□□□ -1.55
TFF1-201ENST00000291527 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
TFF1-201ENST00000291527 F8WDY8 70 aa5.34□□□□□ -1.55
TFF1-201ENST00000291527 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
TFF1-201ENST00000291527 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
TFF1-201ENST00000291527 UNQ6190/PRO20217Q6UXQ8 127 aa5.34□□□□□ -1.55
TFF1-201ENST00000291527 CAMK2N2Q96S95 79 aa5.34□□□□□ -1.55
TFF1-201ENST00000291527 NAA38Q9BRA0 125 aaKnown RBP5.34□□□□□ -1.55
TFF1-201ENST00000291527 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
TFF1-201ENST00000291527 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
TFF1-201ENST00000291527 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
TFF1-201ENST00000291527 SNCGO76070 127 aa5.32□□□□□ -1.56
TFF1-201ENST00000291527 RPL13AP40429 203 aaKnown RBP5.32□□□□□ -1.56
TFF1-201ENST00000291527 LINC00158P58513 81 aa5.32□□□□□ -1.56
TFF1-201ENST00000291527 SPAG11BQ08648 103 aa5.32□□□□□ -1.56
TFF1-201ENST00000291527 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
TFF1-201ENST00000291527 H0YGX0 51 aa5.31□□□□□ -1.56
TFF1-201ENST00000291527 H3BT86 120 aa5.31□□□□□ -1.56
TFF1-201ENST00000291527 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
TFF1-201ENST00000291527 KRTAP1-4P0C5Y4 121 aa5.31□□□□□ -1.56
TFF1-201ENST00000291527 KIAA0087Q14695 138 aa5.31□□□□□ -1.56
TFF1-201ENST00000291527 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
TFF1-201ENST00000291527 SND1-IT1Q9HBX3 110 aa5.31□□□□□ -1.56
TFF1-201ENST00000291527 H7C2G1 150 aa5.3□□□□□ -1.56
TFF1-201ENST00000291527 NDUFC2O95298 119 aa5.3□□□□□ -1.56
TFF1-201ENST00000291527 TCL1BO95988 128 aa5.3□□□□□ -1.56
TFF1-201ENST00000291527 FAM19A5Q7Z5A7 132 aaPredicted RBP5.3□□□□□ -1.56
TFF1-201ENST00000291527 TEN1Q86WV5 123 aa5.3□□□□□ -1.56
TFF1-201ENST00000291527 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
TFF1-201ENST00000291527 VPS25Q9BRG1 176 aa5.3□□□□□ -1.56
TFF1-201ENST00000291527 PRO0461Q9UI25 63 aa5.3□□□□□ -1.56
TFF1-201ENST00000291527 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 TRIAP1O43715 76 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 SLC25A20O43772 301 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 TRACP01848 142 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 GAGE2EQ4V326 116 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 C2orf82Q6UX34 121 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 PPDPFLQ8WWR9 84 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
TFF1-201ENST00000291527 LST1O00453 97 aa5.28□□□□□ -1.56
TFF1-201ENST00000291527 RPL28P46779 137 aaKnown RBP5.28□□□□□ -1.56
TFF1-201ENST00000291527 NPC2P61916 151 aa5.28□□□□□ -1.56
TFF1-201ENST00000291527 RNF151Q2KHN1 245 aa5.28□□□□□ -1.56
TFF1-201ENST00000291527 C9orf129Q5T035 196 aaKnown RBP5.28□□□□□ -1.56
TFF1-201ENST00000291527 ANKRD29Q8N6D5 301 aa5.28□□□□□ -1.56
TFF1-201ENST00000291527 A0A1B0GX51 115 aa5.27□□□□□ -1.57
TFF1-201ENST00000291527 C9JAW5 83 aa5.27□□□□□ -1.57
TFF1-201ENST00000291527 H0Y9J4 135 aa5.27□□□□□ -1.57
TFF1-201ENST00000291527 ETDBQ3ZM63 59 aa5.27□□□□□ -1.57
TFF1-201ENST00000291527 DAND5Q8N907 189 aa5.27□□□□□ -1.57
TFF1-201ENST00000291527 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
TFF1-201ENST00000291527 A0A0U1RRA0 63 aa5.26□□□□□ -1.57
TFF1-201ENST00000291527 H3BQ85 93 aa5.26□□□□□ -1.57
TFF1-201ENST00000291527 GHRHP01286 108 aa5.26□□□□□ -1.57
TFF1-201ENST00000291527 TLX1NBP0CAT3 122 aa5.26□□□□□ -1.57
TFF1-201ENST00000291527 PFN2P35080 140 aa5.26□□□□□ -1.57
TFF1-201ENST00000291527 TMEM126AQ9H061 195 aa5.26□□□□□ -1.57
TFF1-201ENST00000291527 EIF4EBP3O60516 100 aaPredicted RBP5.25□□□□□ -1.57
TFF1-201ENST00000291527 DNAL4O96015 105 aa5.25□□□□□ -1.57
TFF1-201ENST00000291527 SOSTDC1Q6X4U4 206 aa5.25□□□□□ -1.57
TFF1-201ENST00000291527 DIRC1Q969H9 104 aa5.25□□□□□ -1.57
TFF1-201ENST00000291527 PKIGQ9Y2B9 76 aa5.25□□□□□ -1.57
TFF1-201ENST00000291527 ACYP1P07311 99 aa5.23□□□□□ -1.57
TFF1-201ENST00000291527 OR13C6PQ8NH95 151 aa5.23□□□□□ -1.57
TFF1-201ENST00000291527 SCGB1A1P11684 91 aa5.22□□□□□ -1.57
TFF1-201ENST00000291527 SMCPP49901 116 aaPredicted RBP5.22□□□□□ -1.57
TFF1-201ENST00000291527 PRR4Q16378 134 aa5.22□□□□□ -1.57
TFF1-201ENST00000291527 C21orf62-AS1Q17RA5 79 aa5.22□□□□□ -1.57
TFF1-201ENST00000291527 ANAPC11Q9NYG5 84 aa5.22□□□□□ -1.57
TFF1-201ENST00000291527 IGKV2-28A0A075B6P5 120 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 A0A087X002 238 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 FAM240AA0A1B0GVK7 77 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 IGKV2D-28P01615 120 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 UBE2BP63146 152 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 S100A7L2Q5SY68 101 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 LINC00337Q8N6G1 96 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 SIGMAR1Q99720 223 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 XAGE1AQ9HD64 81 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
TFF1-201ENST00000291527 IGLV1-50A0A075B6I6 118 aa5.2□□□□□ -1.58
TFF1-201ENST00000291527 NDUFC2-KCTD14E9PQ53 114 aa5.2□□□□□ -1.58
TFF1-201ENST00000291527 SMIM11BQ8TCY0 68 aa5.2□□□□□ -1.58
TFF1-201ENST00000291527 TRBV7-6A0A0J9YX20 115 aa5.19□□□□□ -1.58
TFF1-201ENST00000291527 CLEC2BQ92478 149 aa5.19□□□□□ -1.58
TFF1-201ENST00000291527 ZNF861PO60384 105 aa5.18□□□□□ -1.58
TFF1-201ENST00000291527 BAALC-AS2P0C853 105 aa5.18□□□□□ -1.58
TFF1-201ENST00000291527 MTURNQ8N3F0 131 aa5.18□□□□□ -1.58
TFF1-201ENST00000291527 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
TFF1-201ENST00000291527 JMJD7-PLA2G4BH0Y9G9 81 aa5.17□□□□□ -1.58
TFF1-201ENST00000291527 TMEM256-PLSCR3K7ERE1 68 aa5.17□□□□□ -1.58
TFF1-201ENST00000291527 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms