RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TMEM126AQ9H061 195 aa5.44□□□□□ -1.54
HMGN1-201ENST00000288344 IGKV2-28A0A075B6P5 120 aa5.43□□□□□ -1.54
HMGN1-201ENST00000288344 IGKV2D-28P01615 120 aa5.43□□□□□ -1.54
HMGN1-201ENST00000288344 DAND5Q8N907 189 aa5.43□□□□□ -1.54
HMGN1-201ENST00000288344 NKAPP1Q8N9T2 125 aa5.43□□□□□ -1.54
HMGN1-201ENST00000288344 HIST1H2BLQ99880 126 aa5.43□□□□□ -1.54
HMGN1-201ENST00000288344 TTTY13Q9BZ97 58 aa5.43□□□□□ -1.54
HMGN1-201ENST00000288344 KCNQ1DNQ9H478 68 aa5.43□□□□□ -1.54
HMGN1-201ENST00000288344 HERVK_113P61574 105 aa5.42□□□□□ -1.54
HMGN1-201ENST00000288344 MEIG1Q5JSS6 88 aa5.42□□□□□ -1.54
HMGN1-201ENST00000288344 BOD1L2Q8IYS8 172 aa5.42□□□□□ -1.54
HMGN1-201ENST00000288344 A0A087X002 238 aa5.41□□□□□ -1.54
HMGN1-201ENST00000288344 TRBV10-2A0A0K0K1G8 114 aa5.41□□□□□ -1.54
HMGN1-201ENST00000288344 TIMM17BO60830 172 aa5.41□□□□□ -1.54
HMGN1-201ENST00000288344 NDUFC2O95298 119 aa5.41□□□□□ -1.54
HMGN1-201ENST00000288344 LGALS3P17931 250 aaKnown RBP5.41□□□□□ -1.54
HMGN1-201ENST00000288344 RPL28P46779 137 aaKnown RBP5.41□□□□□ -1.54
HMGN1-201ENST00000288344 TRBV10-3A0A0K0K1G6 114 aa5.4□□□□□ -1.55
HMGN1-201ENST00000288344 C5orf52A6NGY3 159 aa5.4□□□□□ -1.55
HMGN1-201ENST00000288344 IGLV6-57P01721 117 aa5.4□□□□□ -1.55
HMGN1-201ENST00000288344 KRTDAPP60985 99 aa5.4□□□□□ -1.55
HMGN1-201ENST00000288344 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.55
HMGN1-201ENST00000288344 KRTAP13-2Q52LG2 175 aa5.39□□□□□ -1.55
HMGN1-201ENST00000288344 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
HMGN1-201ENST00000288344 PRLHP81277 87 aa5.38□□□□□ -1.55
HMGN1-201ENST00000288344 LINC00308Q8TCZ7 52 aa5.38□□□□□ -1.55
HMGN1-201ENST00000288344 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
HMGN1-201ENST00000288344 ANAPC11Q9NYG5 84 aa5.38□□□□□ -1.55
HMGN1-201ENST00000288344 SNRPEP62304 92 aaKnown RBP5.37□□□□□ -1.55
HMGN1-201ENST00000288344 FAM229BQ4G0N7 80 aa5.37□□□□□ -1.55
HMGN1-201ENST00000288344 PCP2Q8IVA1 136 aa5.37□□□□□ -1.55
HMGN1-201ENST00000288344 SMCR5Q8TEV8 140 aa5.37□□□□□ -1.55
HMGN1-201ENST00000288344 ZNF815PA8K554 130 aa5.36□□□□□ -1.55
HMGN1-201ENST00000288344 NCR3O14931 201 aa5.36□□□□□ -1.55
HMGN1-201ENST00000288344 ATOH7Q8N100 152 aa5.36□□□□□ -1.55
HMGN1-201ENST00000288344 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
HMGN1-201ENST00000288344 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
HMGN1-201ENST00000288344 UBE2AP49459 152 aa5.35□□□□□ -1.55
HMGN1-201ENST00000288344 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
HMGN1-201ENST00000288344 Q9BRP9 147 aa5.35□□□□□ -1.55
HMGN1-201ENST00000288344 SPANXDQ9BXN6 97 aa5.35□□□□□ -1.55
HMGN1-201ENST00000288344 SPANXCQ9NY87 97 aa5.35□□□□□ -1.55
HMGN1-201ENST00000288344 DDTP30046 118 aa5.34□□□□□ -1.55
HMGN1-201ENST00000288344 RPL13AP40429 203 aaKnown RBP5.34□□□□□ -1.55
HMGN1-201ENST00000288344 AKR1D1P51857 326 aa5.34□□□□□ -1.55
HMGN1-201ENST00000288344 SPRR4Q96PI1 79 aa5.34□□□□□ -1.55
HMGN1-201ENST00000288344 C20orf202A1L168 122 aa5.33□□□□□ -1.56
HMGN1-201ENST00000288344 ERC2-IT1O76042 136 aa5.33□□□□□ -1.56
HMGN1-201ENST00000288344 CRYGAP11844 174 aa5.33□□□□□ -1.56
HMGN1-201ENST00000288344 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
HMGN1-201ENST00000288344 LINC00483Q53H64 154 aa5.33□□□□□ -1.56
HMGN1-201ENST00000288344 NPC2P61916 151 aa5.32□□□□□ -1.56
HMGN1-201ENST00000288344 Q6ZRX8 168 aa5.31□□□□□ -1.56
HMGN1-201ENST00000288344 Q6ZVH6 145 aa5.31□□□□□ -1.56
HMGN1-201ENST00000288344 S100A6P06703 90 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 IFITM1P13164 125 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 S100A2P29034 98 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 CTAG1AP78358 180 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 MUSTN1Q8IVN3 82 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 C3orf22Q8N5N4 141 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 MIEN1Q9BRT3 115 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 HIGD2AQ9BW72 106 aa5.3□□□□□ -1.56
HMGN1-201ENST00000288344 ZNF73O43830 326 aaPredicted RBP5.29□□□□□ -1.56
HMGN1-201ENST00000288344 TYMSOSQ8TAI1 123 aa5.29□□□□□ -1.56
HMGN1-201ENST00000288344 MUC2Q02817 5179 aa5.29□□□□□ -1.56
HMGN1-201ENST00000288344 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
HMGN1-201ENST00000288344 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
HMGN1-201ENST00000288344 ETDCA0A1B0GVM5 59 aa5.28□□□□□ -1.56
HMGN1-201ENST00000288344 LINC00518Q8N0U6 118 aa5.28□□□□□ -1.56
HMGN1-201ENST00000288344 DLEU1O43261 78 aa5.27□□□□□ -1.57
HMGN1-201ENST00000288344 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
HMGN1-201ENST00000288344 COX8AP10176 69 aa5.26□□□□□ -1.57
HMGN1-201ENST00000288344 SPRR1BP22528 89 aa5.26□□□□□ -1.57
HMGN1-201ENST00000288344 JOSD1Q15040 202 aaPredicted RBP5.26□□□□□ -1.57
HMGN1-201ENST00000288344 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
HMGN1-201ENST00000288344 TRBV7-6A0A0J9YX20 115 aa5.25□□□□□ -1.57
HMGN1-201ENST00000288344 ELOF1P60002 83 aaKnown RBP5.25□□□□□ -1.57
HMGN1-201ENST00000288344 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
HMGN1-201ENST00000288344 ZNF706Q9Y5V0 76 aaPredicted RBP5.24□□□□□ -1.57
HMGN1-201ENST00000288344 TSPAN13O95857 204 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 LINC01547P58512 204 aaPredicted RBP5.23□□□□□ -1.57
HMGN1-201ENST00000288344 S100A12P80511 92 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 C6orf99Q4VX62 202 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 A4D1N5 150 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 GAGE2AQ6NT46 116 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 C2orf91Q6ZV80 131 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 OR13C6PQ8NH95 151 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 CBY1Q9Y3M2 126 aa5.23□□□□□ -1.57
HMGN1-201ENST00000288344 HSBP1L1C9JCN9 74 aa5.22□□□□□ -1.57
HMGN1-201ENST00000288344 PYY3Q5JQD4 70 aa5.22□□□□□ -1.57
HMGN1-201ENST00000288344 SPAG11AQ6PDA7 123 aa5.22□□□□□ -1.57
HMGN1-201ENST00000288344 SMIM29Q86T20 159 aa5.22□□□□□ -1.57
HMGN1-201ENST00000288344 SMIM11BQ8TCY0 68 aa5.22□□□□□ -1.57
HMGN1-201ENST00000288344 COPS9Q8WXC6 57 aa5.22□□□□□ -1.57
HMGN1-201ENST00000288344 IGLV5-48A0A075B6I7 105 aa5.21□□□□□ -1.58
HMGN1-201ENST00000288344 Q8NBF4 154 aa5.21□□□□□ -1.58
HMGN1-201ENST00000288344 C14orf144Q96I85 54 aa5.21□□□□□ -1.58
HMGN1-201ENST00000288344 DHRS4-AS1Q9P1J3 65 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms