RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 IGHV6-1A0A0B4J1U7 121 aa8.64□□□□□ -1.03
SLC6A1-201ENST00000287766 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
SLC6A1-201ENST00000287766 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
SLC6A1-201ENST00000287766 hDV103S1A0JD37 113 aa8.63□□□□□ -1.03
SLC6A1-201ENST00000287766 PLAC8L1A1L4L8 177 aa8.63□□□□□ -1.03
SLC6A1-201ENST00000287766 UNC79Q9P2D8 2635 aa8.63□□□□□ -1.03
SLC6A1-201ENST00000287766 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
SLC6A1-201ENST00000287766 SERTAD4-AS1Q5TG53 156 aa8.62□□□□□ -1.03
SLC6A1-201ENST00000287766 SPINK1P00995 79 aa8.62□□□□□ -1.03
SLC6A1-201ENST00000287766 X6R8D5 127 aa8.62□□□□□ -1.03
SLC6A1-201ENST00000287766 NF1P21359 2839 aa8.62□□□□□ -1.03
SLC6A1-201ENST00000287766 GIG44P09565 113 aaPredicted RBP8.62□□□□□ -1.03
SLC6A1-201ENST00000287766 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
SLC6A1-201ENST00000287766 NOTCH1P46531 2555 aa8.61□□□□□ -1.03
SLC6A1-201ENST00000287766 BCE1O60756 84 aa8.61□□□□□ -1.03
SLC6A1-201ENST00000287766 KIAA0087Q14695 138 aa8.6□□□□□ -1.03
SLC6A1-201ENST00000287766 Q6ZQT0 140 aa8.6□□□□□ -1.03
SLC6A1-201ENST00000287766 RETNLBQ9BQ08 111 aa8.6□□□□□ -1.03
SLC6A1-201ENST00000287766 FBN2P35556 2912 aa8.6□□□□□ -1.03
SLC6A1-201ENST00000287766 A8MUN3 132 aa8.6□□□□□ -1.03
SLC6A1-201ENST00000287766 LYPD5Q6UWN5 251 aa8.58□□□□□ -1.04
SLC6A1-201ENST00000287766 Q6ZRU5 148 aa8.58□□□□□ -1.04
SLC6A1-201ENST00000287766 Q9BRP9 147 aa8.57□□□□□ -1.04
SLC6A1-201ENST00000287766 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
SLC6A1-201ENST00000287766 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
SLC6A1-201ENST00000287766 REG3GQ6UW15 175 aa8.56□□□□□ -1.04
SLC6A1-201ENST00000287766 CSNK1G2-AS1Q8NCQ2 148 aa8.56□□□□□ -1.04
SLC6A1-201ENST00000287766 PRLHP81277 87 aa8.56□□□□□ -1.04
SLC6A1-201ENST00000287766 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
SLC6A1-201ENST00000287766 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
SLC6A1-201ENST00000287766 CELSR2Q9HCU4 2923 aa8.53□□□□□ -1.04
SLC6A1-201ENST00000287766 SVEP1Q4LDE5 3571 aa8.52□□□□□ -1.05
SLC6A1-201ENST00000287766 CELSR1Q9NYQ6 3014 aa8.52□□□□□ -1.05
SLC6A1-201ENST00000287766 M0R2N4 97 aa8.52□□□□□ -1.05
SLC6A1-201ENST00000287766 KRTAP1-3Q8IUG1 177 aa8.52□□□□□ -1.05
SLC6A1-201ENST00000287766 H7BZZ5 65 aa8.51□□□□□ -1.05
SLC6A1-201ENST00000287766 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
SLC6A1-201ENST00000287766 NBEAL1Q6ZS30 2694 aa8.51□□□□□ -1.05
SLC6A1-201ENST00000287766 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
SLC6A1-201ENST00000287766 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
SLC6A1-201ENST00000287766 C2orf48Q96LS8 159 aa8.5□□□□□ -1.05
SLC6A1-201ENST00000287766 KRTAP10-3P60369 221 aa8.5□□□□□ -1.05
SLC6A1-201ENST00000287766 CR1P17927 2039 aa8.49□□□□□ -1.05
SLC6A1-201ENST00000287766 LOC110117498A0A087WWA1 95 aa8.49□□□□□ -1.05
SLC6A1-201ENST00000287766 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
SLC6A1-201ENST00000287766 C7orf33Q8WU49 177 aa8.48□□□□□ -1.05
SLC6A1-201ENST00000287766 A0A1B0GU69 56 aa8.48□□□□□ -1.05
SLC6A1-201ENST00000287766 COL6A5A8TX70 2615 aa8.48□□□□□ -1.05
SLC6A1-201ENST00000287766 Q8NAQ8 132 aa8.47□□□□□ -1.05
SLC6A1-201ENST00000287766 ZNF706Q9Y5V0 76 aaPredicted RBP8.47□□□□□ -1.05
SLC6A1-201ENST00000287766 STAB1Q9NY15 2570 aa8.47□□□□□ -1.05
SLC6A1-201ENST00000287766 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
SLC6A1-201ENST00000287766 C22orf24Q9Y442 160 aa8.46□□□□□ -1.05
SLC6A1-201ENST00000287766 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
SLC6A1-201ENST00000287766 Q8NBF4 154 aa8.45□□□□□ -1.06
SLC6A1-201ENST00000287766 TRBV7-4A0A0J9YYF1 115 aa8.45□□□□□ -1.06
SLC6A1-201ENST00000287766 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
SLC6A1-201ENST00000287766 CUBNO60494 3623 aa8.44□□□□□ -1.06
SLC6A1-201ENST00000287766 MXRA5Q9NR99 2828 aa8.44□□□□□ -1.06
SLC6A1-201ENST00000287766 ELOF1P60002 83 aaKnown RBP8.44□□□□□ -1.06
SLC6A1-201ENST00000287766 F8WDY8 70 aa8.43□□□□□ -1.06
SLC6A1-201ENST00000287766 APCP25054 2843 aa8.43□□□□□ -1.06
SLC6A1-201ENST00000287766 LINC00167Q96N53 147 aa8.42□□□□□ -1.06
SLC6A1-201ENST00000287766 CD164Q04900 197 aa8.42□□□□□ -1.06
SLC6A1-201ENST00000287766 IGKV2D-30A0A075B6S6 120 aa8.42□□□□□ -1.06
SLC6A1-201ENST00000287766 IGKV2-30P06310 120 aa8.42□□□□□ -1.06
SLC6A1-201ENST00000287766 KRTAP1-1Q07627 177 aa8.42□□□□□ -1.06
SLC6A1-201ENST00000287766 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
SLC6A1-201ENST00000287766 TRAV22A0A0B4J277 110 aa8.42□□□□□ -1.06
SLC6A1-201ENST00000287766 C8orf87E5RJ46 101 aa8.41□□□□□ -1.06
SLC6A1-201ENST00000287766 K7EQZ3 153 aa8.4□□□□□ -1.06
SLC6A1-201ENST00000287766 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.07
SLC6A1-201ENST00000287766 LINC01556Q5JQF7 62 aa8.39□□□□□ -1.07
SLC6A1-201ENST00000287766 MDFIQ99750 246 aa8.38□□□□□ -1.07
SLC6A1-201ENST00000287766 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
SLC6A1-201ENST00000287766 HIVEP1P15822 2718 aa8.37□□□□□ -1.07
SLC6A1-201ENST00000287766 ACYP2P14621 99 aa8.37□□□□□ -1.07
SLC6A1-201ENST00000287766 Q6ZRP5 223 aa8.35□□□□□ -1.07
SLC6A1-201ENST00000287766 COA5Q86WW8 74 aa8.35□□□□□ -1.07
SLC6A1-201ENST00000287766 VPREB1P12018 145 aa8.35□□□□□ -1.07
SLC6A1-201ENST00000287766 WIPF1O43516 503 aa8.34□□□□□ -1.07
SLC6A1-201ENST00000287766 KRTAP24-1Q3LI83 254 aa8.34□□□□□ -1.07
SLC6A1-201ENST00000287766 TP53AIP1Q9HCN2 124 aa8.34□□□□□ -1.07
SLC6A1-201ENST00000287766 SPENQ96T58 3664 aaKnown RBP8.34□□□□□ -1.07
SLC6A1-201ENST00000287766 Q6ZRX8 168 aa8.34□□□□□ -1.07
SLC6A1-201ENST00000287766 NSD1Q96L73 2696 aaPredicted RBP8.33□□□□□ -1.08
SLC6A1-201ENST00000287766 A0A1B0GW54 56 aa8.33□□□□□ -1.08
SLC6A1-201ENST00000287766 H3BPC8 53 aa8.33□□□□□ -1.08
SLC6A1-201ENST00000287766 LINC00612Q8N6U2 182 aa8.33□□□□□ -1.08
SLC6A1-201ENST00000287766 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
SLC6A1-201ENST00000287766 LOC101927531A0A1B0GV80 90 aa8.32□□□□□ -1.08
SLC6A1-201ENST00000287766 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
SLC6A1-201ENST00000287766 IGLV6-57P01721 117 aa8.32□□□□□ -1.08
SLC6A1-201ENST00000287766 KTN1-AS1Q86SY8 53 aa8.31□□□□□ -1.08
SLC6A1-201ENST00000287766 FLG2Q5D862 2391 aaPredicted RBP8.31□□□□□ -1.08
SLC6A1-201ENST00000287766 BAHCC1Q9P281 2608 aa8.3□□□□□ -1.08
SLC6A1-201ENST00000287766 C7orf65Q6ZTY9 151 aa8.3□□□□□ -1.08
SLC6A1-201ENST00000287766 KRTAP10-11P60412 298 aa8.3□□□□□ -1.08
SLC6A1-201ENST00000287766 CYSTM1Q9H1C7 97 aa8.3□□□□□ -1.08
SLC6A1-201ENST00000287766 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms