RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 COX17Q14061 63 aa9.27□□□□□ -0.93
LPCAT1-201ENST00000283415 TRRAPQ9Y4A5 3859 aa9.26□□□□□ -0.93
LPCAT1-201ENST00000283415 TRAV10A0A0B4J240 114 aa9.26□□□□□ -0.93
LPCAT1-201ENST00000283415 KIAA0087Q14695 138 aa9.26□□□□□ -0.93
LPCAT1-201ENST00000283415 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
LPCAT1-201ENST00000283415 DEFB116Q30KQ4 102 aa9.25□□□□□ -0.93
LPCAT1-201ENST00000283415 KRTAP10-11P60412 298 aa9.24□□□□□ -0.93
LPCAT1-201ENST00000283415 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
LPCAT1-201ENST00000283415 MUC7Q8TAX7 377 aa9.24□□□□□ -0.93
LPCAT1-201ENST00000283415 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
LPCAT1-201ENST00000283415 ATP5EP2Q5VTU8 51 aa9.23□□□□□ -0.93
LPCAT1-201ENST00000283415 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
LPCAT1-201ENST00000283415 NDUFC2O95298 119 aa9.22□□□□□ -0.93
LPCAT1-201ENST00000283415 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
LPCAT1-201ENST00000283415 CRYGAP11844 174 aa9.22□□□□□ -0.93
LPCAT1-201ENST00000283415 PKIGQ9Y2B9 76 aa9.22□□□□□ -0.93
LPCAT1-201ENST00000283415 WIPF1O43516 503 aa9.21□□□□□ -0.93
LPCAT1-201ENST00000283415 M0R378 163 aa9.21□□□□□ -0.94
LPCAT1-201ENST00000283415 Q8NDZ9 215 aa9.21□□□□□ -0.94
LPCAT1-201ENST00000283415 PDE6GP18545 87 aa9.2□□□□□ -0.94
LPCAT1-201ENST00000283415 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
LPCAT1-201ENST00000283415 C5orf47Q569G3 176 aa9.18□□□□□ -0.94
LPCAT1-201ENST00000283415 Q6ZQT0 140 aa9.18□□□□□ -0.94
LPCAT1-201ENST00000283415 TM2D3Q9BRN9 247 aa9.18□□□□□ -0.94
LPCAT1-201ENST00000283415 NDUFC2-KCTD14E9PQ53 114 aa9.18□□□□□ -0.94
LPCAT1-201ENST00000283415 FAM168BA1KXE4 195 aa9.18□□□□□ -0.94
LPCAT1-201ENST00000283415 EGFEM1PQ0D2K5 195 aa9.17□□□□□ -0.94
LPCAT1-201ENST00000283415 TRAV7A0A075B6U4 112 aa9.16□□□□□ -0.94
LPCAT1-201ENST00000283415 Q6ZRP5 223 aa9.16□□□□□ -0.94
LPCAT1-201ENST00000283415 CASC10Q5T4H9 136 aa9.15□□□□□ -0.94
LPCAT1-201ENST00000283415 A0A0G2JQZ4 141 aa9.15□□□□□ -0.95
LPCAT1-201ENST00000283415 A0A1W2PNN7 141 aa9.15□□□□□ -0.95
LPCAT1-201ENST00000283415 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
LPCAT1-201ENST00000283415 PRR34Q9NV39 138 aa9.14□□□□□ -0.95
LPCAT1-201ENST00000283415 PRLHP81277 87 aa9.14□□□□□ -0.95
LPCAT1-201ENST00000283415 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
LPCAT1-201ENST00000283415 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
LPCAT1-201ENST00000283415 UBE2AP49459 152 aa9.12□□□□□ -0.95
LPCAT1-201ENST00000283415 ST20-AS1Q8NBB2 130 aa9.11□□□□□ -0.95
LPCAT1-201ENST00000283415 C1orf137Q5JT78 98 aa9.11□□□□□ -0.95
LPCAT1-201ENST00000283415 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
LPCAT1-201ENST00000283415 TMEM254Q8TBM7 123 aa9.1□□□□□ -0.95
LPCAT1-201ENST00000283415 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
LPCAT1-201ENST00000283415 GVQW2A0A096LPI5 108 aaPredicted RBP9.09□□□□□ -0.95
LPCAT1-201ENST00000283415 NDUFS5O43920 106 aa9.08□□□□□ -0.96
LPCAT1-201ENST00000283415 H0Y9J4 135 aa9.08□□□□□ -0.96
LPCAT1-201ENST00000283415 CHTF8P0CG12 524 aa9.08□□□□□ -0.96
LPCAT1-201ENST00000283415 KRTAP26-1Q6PEX3 210 aa9.08□□□□□ -0.96
LPCAT1-201ENST00000283415 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
LPCAT1-201ENST00000283415 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
LPCAT1-201ENST00000283415 VPREB1P12018 145 aa9.06□□□□□ -0.96
LPCAT1-201ENST00000283415 SMIM29Q86T20 159 aa9.05□□□□□ -0.96
LPCAT1-201ENST00000283415 ELOF1P60002 83 aaKnown RBP9.05□□□□□ -0.96
LPCAT1-201ENST00000283415 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
LPCAT1-201ENST00000283415 LINC00474Q9P2X8 69 aa9.05□□□□□ -0.96
LPCAT1-201ENST00000283415 H3BQ85 93 aa9.05□□□□□ -0.96
LPCAT1-201ENST00000283415 A0A087WSZ3 146 aa9.03□□□□□ -0.96
LPCAT1-201ENST00000283415 TRBV7-6A0A0J9YX20 115 aa9.03□□□□□ -0.96
LPCAT1-201ENST00000283415 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
LPCAT1-201ENST00000283415 DYNC2H1Q8NCM8 4307 aaKnown RBP9.02□□□□□ -0.97
LPCAT1-201ENST00000283415 MRPL55Q7Z7F7 128 aaKnown RBP9.02□□□□□ -0.97
LPCAT1-201ENST00000283415 IGLV9-49A0A0B4J1Y8 123 aa9.01□□□□□ -0.97
LPCAT1-201ENST00000283415 H3BNG1 76 aa9.01□□□□□ -0.97
LPCAT1-201ENST00000283415 PRYO14603 147 aa9.01□□□□□ -0.97
LPCAT1-201ENST00000283415 MP68P56378 58 aa9□□□□□ -0.97
LPCAT1-201ENST00000283415 LOC110117498A0A087WWA1 95 aa9□□□□□ -0.97
LPCAT1-201ENST00000283415 CXCL6P80162 114 aa8.99□□□□□ -0.97
LPCAT1-201ENST00000283415 LYSTQ99698 3801 aa8.99□□□□□ -0.97
LPCAT1-201ENST00000283415 SMIM26A0A096LP01 95 aa8.99□□□□□ -0.97
LPCAT1-201ENST00000283415 K7EIL1 84 aa8.99□□□□□ -0.97
LPCAT1-201ENST00000283415 PSPHP1O15172 72 aa8.99□□□□□ -0.97
LPCAT1-201ENST00000283415 DHRS4-AS1Q9P1J3 65 aa8.99□□□□□ -0.97
LPCAT1-201ENST00000283415 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
LPCAT1-201ENST00000283415 CDK2AP2O75956 126 aa8.97□□□□□ -0.97
LPCAT1-201ENST00000283415 LINC00208Q96KT6 92 aa8.97□□□□□ -0.97
LPCAT1-201ENST00000283415 H7BZZ5 65 aa8.97□□□□□ -0.97
LPCAT1-201ENST00000283415 REG3GQ6UW15 175 aa8.97□□□□□ -0.97
LPCAT1-201ENST00000283415 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.97
LPCAT1-201ENST00000283415 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.97
LPCAT1-201ENST00000283415 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.97
LPCAT1-201ENST00000283415 RPS28P62857 69 aaKnown RBP8.96□□□□□ -0.98
LPCAT1-201ENST00000283415 OXTP01178 125 aa8.96□□□□□ -0.98
LPCAT1-201ENST00000283415 DNAH10OSP0CZ25 163 aa8.96□□□□□ -0.98
LPCAT1-201ENST00000283415 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.98
LPCAT1-201ENST00000283415 ERC2-IT1O76042 136 aa8.94□□□□□ -0.98
LPCAT1-201ENST00000283415 NDUFC1O43677 76 aa8.94□□□□□ -0.98
LPCAT1-201ENST00000283415 Q8N377 158 aa8.93□□□□□ -0.98
LPCAT1-201ENST00000283415 TRBV7-4A0A0J9YYF1 115 aa8.93□□□□□ -0.98
LPCAT1-201ENST00000283415 LY6G6CO95867 125 aa8.92□□□□□ -0.98
LPCAT1-201ENST00000283415 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
LPCAT1-201ENST00000283415 LINC00336Q6ZUF6 198 aa8.91□□□□□ -0.98
LPCAT1-201ENST00000283415 K7EQZ3 153 aa8.91□□□□□ -0.98
LPCAT1-201ENST00000283415 Q6ZRX8 168 aa8.9□□□□□ -0.98
LPCAT1-201ENST00000283415 Q9BRP9 147 aa8.9□□□□□ -0.99
LPCAT1-201ENST00000283415 DNAH9Q9NYC9 4486 aa8.89□□□□□ -0.99
LPCAT1-201ENST00000283415 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
LPCAT1-201ENST00000283415 PCOTHQ58A44 107 aa8.88□□□□□ -0.99
LPCAT1-201ENST00000283415 LINC00476Q8WZB0 136 aa8.88□□□□□ -0.99
LPCAT1-201ENST00000283415 NDUFB1O75438 58 aa8.88□□□□□ -0.99
LPCAT1-201ENST00000283415 IGKV4-1P06312 121 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms