RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 UBR5O95071 2799 aaPredicted RBP2.77□□□□□ -1.97
SCN3A-201ENST00000283254 PTPRBP23467 1997 aa2.77□□□□□ -1.97
SCN3A-201ENST00000283254 Q96NJ1 140 aa2.77□□□□□ -1.97
SCN3A-201ENST00000283254 URB1-AS1Q96HZ7 61 aa2.77□□□□□ -1.97
SCN3A-201ENST00000283254 FAM19A4Q96LR4 140 aa2.77□□□□□ -1.97
SCN3A-201ENST00000283254 HIVEP1P15822 2718 aa2.77□□□□□ -1.97
SCN3A-201ENST00000283254 UQCR11O14957 56 aa2.76□□□□□ -1.97
SCN3A-201ENST00000283254 Q6ZQT0 140 aa2.76□□□□□ -1.97
SCN3A-201ENST00000283254 RBM12B-AS1Q9P1G2 102 aa2.76□□□□□ -1.97
SCN3A-201ENST00000283254 KCNQ1DNQ9H478 68 aa2.75□□□□□ -1.97
SCN3A-201ENST00000283254 CYP4F30PQ9H0H9 118 aa2.75□□□□□ -1.97
SCN3A-201ENST00000283254 IGLV6-57P01721 117 aa2.75□□□□□ -1.97
SCN3A-201ENST00000283254 KLK9Q2XQG4 91 aa2.75□□□□□ -1.97
SCN3A-201ENST00000283254 MRPL34Q9BQ48 92 aaKnown RBP2.75□□□□□ -1.97
SCN3A-201ENST00000283254 RPS28P62857 69 aaKnown RBP2.75□□□□□ -1.97
SCN3A-201ENST00000283254 PHF5AQ7RTV0 110 aaKnown RBP2.74□□□□□ -1.97
SCN3A-201ENST00000283254 ZNF861PO60384 105 aa2.74□□□□□ -1.97
SCN3A-201ENST00000283254 COL4A2P08572 1712 aa2.74□□□□□ -1.97
SCN3A-201ENST00000283254 TENM3Q9P273 2699 aa2.74□□□□□ -1.97
SCN3A-201ENST00000283254 KMT2BQ9UMN6 2715 aaPredicted RBP2.73□□□□□ -1.97
SCN3A-201ENST00000283254 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
SCN3A-201ENST00000283254 COL27A1Q8IZC6 1860 aaPredicted RBP2.73□□□□□ -1.97
SCN3A-201ENST00000283254 A0A1B0GVX0 72 aa2.73□□□□□ -1.97
SCN3A-201ENST00000283254 PRR15Q8IV56 129 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 LINC00528Q8N1L1 170 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 PRR34Q9NV39 138 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 IGLV1-50A0A075B6I6 118 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 CHTF8P0CG12 524 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 C9orf163Q8N9P6 203 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 Q9UF83 564 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 IGLV5-37A0A075B6J1 123 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 OBSCN-AS1Q96MR7 158 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 C8orf17Q9NRJ1 99 aa2.72□□□□□ -1.97
SCN3A-201ENST00000283254 K7EIL1 84 aa2.71□□□□□ -1.98
SCN3A-201ENST00000283254 CNBPP62633 177 aaKnown RBP2.71□□□□□ -1.98
SCN3A-201ENST00000283254 A0A087WTM6 91 aa2.71□□□□□ -1.98
SCN3A-201ENST00000283254 TLX1NBP0CAT3 122 aa2.71□□□□□ -1.98
SCN3A-201ENST00000283254 FAM218AQ96MZ4 157 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 APLNQ9ULZ1 77 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 COA5Q86WW8 74 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 PSORS1C2Q9UIG4 136 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 PLA2G2DQ9UNK4 145 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 ITPR2Q14571 2701 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 C15orf56Q8N910 161 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 IGLV8-61A0A075B6I0 122 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 LINC00612Q8N6U2 182 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 TM2D3Q9BRN9 247 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 C19orf73Q9NVV2 129 aa2.7□□□□□ -1.98
SCN3A-201ENST00000283254 CD164Q04900 197 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 SRCAPQ6ZRS2 3230 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 IGLV7-43P04211 117 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 K7EQZ3 153 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 LINC00483Q53H64 154 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 A8MUN3 132 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 CSNK1G2-AS1Q8NCQ2 148 aa2.69□□□□□ -1.98
SCN3A-201ENST00000283254 KLKP1Q107X0 134 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 Q6ZSA8 131 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 SPRR4Q96PI1 79 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 CR1P17927 2039 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 PRO0461Q9UI25 63 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 DSCR10P59022 87 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
SCN3A-201ENST00000283254 FAM168BA1KXE4 195 aa2.67□□□□□ -1.98
SCN3A-201ENST00000283254 FAM229BQ4G0N7 80 aa2.67□□□□□ -1.98
SCN3A-201ENST00000283254 C9orf129Q5T035 196 aaKnown RBP2.67□□□□□ -1.98
SCN3A-201ENST00000283254 LITAFQ99732 161 aa2.67□□□□□ -1.98
SCN3A-201ENST00000283254 FAM104AQ969W3 186 aa2.67□□□□□ -1.98
SCN3A-201ENST00000283254 ITPR1Q14643 2758 aa2.67□□□□□ -1.98
SCN3A-201ENST00000283254 IGLV5-48A0A075B6I7 105 aa2.66□□□□□ -1.98
SCN3A-201ENST00000283254 ZNF575Q86XF7 245 aa2.66□□□□□ -1.98
SCN3A-201ENST00000283254 CAMK2N1Q7Z7J9 78 aa2.66□□□□□ -1.98
SCN3A-201ENST00000283254 C9orf92A6NGG3 77 aa2.66□□□□□ -1.98
SCN3A-201ENST00000283254 KRTAP10-11P60412 298 aa2.65□□□□□ -1.98
SCN3A-201ENST00000283254 M0R2T5 61 aa2.65□□□□□ -1.99
SCN3A-201ENST00000283254 Q1T7F1 81 aa2.65□□□□□ -1.99
SCN3A-201ENST00000283254 LINC01554Q52M75 96 aa2.65□□□□□ -1.99
SCN3A-201ENST00000283254 PCSK5Q92824 1860 aa2.65□□□□□ -1.99
SCN3A-201ENST00000283254 SMCPP49901 116 aaPredicted RBP2.65□□□□□ -1.99
SCN3A-201ENST00000283254 NIPBLQ6KC79 2804 aaeCLIP2.65□□□□□ -1.99
SCN3A-201ENST00000283254 CENPFP49454 3210 aa2.64□□□□□ -1.99
SCN3A-201ENST00000283254 IGLV7-46A0A075B6I9 117 aa2.64□□□□□ -1.99
SCN3A-201ENST00000283254 HRES1P13985 223 aa2.64□□□□□ -1.99
SCN3A-201ENST00000283254 TENM4Q6N022 2769 aa2.64□□□□□ -1.99
SCN3A-201ENST00000283254 A0A096LNT2 108 aa2.64□□□□□ -1.99
SCN3A-201ENST00000283254 SMR3BP02814 79 aaPredicted RBP2.64□□□□□ -1.99
SCN3A-201ENST00000283254 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
SCN3A-201ENST00000283254 SEC61BP60468 96 aaKnown RBP2.62□□□□□ -1.99
SCN3A-201ENST00000283254 Q8N377 158 aa2.62□□□□□ -1.99
SCN3A-201ENST00000283254 WIPF1O43516 503 aa2.62□□□□□ -1.99
SCN3A-201ENST00000283254 GIG44P09565 113 aaPredicted RBP2.61□□□□□ -1.99
SCN3A-201ENST00000283254 A0A0D9SG42 100 aa2.61□□□□□ -1.99
SCN3A-201ENST00000283254 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
SCN3A-201ENST00000283254 Q8N1X5 172 aa2.6□□□□□ -1.99
SCN3A-201ENST00000283254 CASC10Q5T4H9 136 aa2.6□□□□□ -1.99
SCN3A-201ENST00000283254 NBEAL2Q6ZNJ1 2754 aa2.6□□□□□ -1.99
SCN3A-201ENST00000283254 C4orf26Q17RF5 130 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms