RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
PDGFC-201ENST00000274071 CCL24O00175 119 aa6.1□□□□□ -1.43
PDGFC-201ENST00000274071 INSP01308 110 aa6.1□□□□□ -1.43
PDGFC-201ENST00000274071 LINC00313P59037 77 aa6.1□□□□□ -1.43
PDGFC-201ENST00000274071 AKAP9Q99996 3911 aa6.1□□□□□ -1.43
PDGFC-201ENST00000274071 MYO9AB2RTY4 2548 aa6.09□□□□□ -1.43
PDGFC-201ENST00000274071 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
PDGFC-201ENST00000274071 Q9BRP9 147 aa6.09□□□□□ -1.43
PDGFC-201ENST00000274071 ITPR2Q14571 2701 aa6.08□□□□□ -1.44
PDGFC-201ENST00000274071 CLPSL2Q6UWE3 100 aa6.08□□□□□ -1.44
PDGFC-201ENST00000274071 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
PDGFC-201ENST00000274071 NOTCH3Q9UM47 2321 aa6.08□□□□□ -1.44
PDGFC-201ENST00000274071 SONP18583 2426 aaKnown RBP6.08□□□□□ -1.44
PDGFC-201ENST00000274071 FLNAP21333 2647 aaKnown RBP6.07□□□□□ -1.44
PDGFC-201ENST00000274071 NF1P21359 2839 aa6.07□□□□□ -1.44
PDGFC-201ENST00000274071 ZNF702PQ9H963 129 aa6.07□□□□□ -1.44
PDGFC-201ENST00000274071 DSCR10P59022 87 aa6.06□□□□□ -1.44
PDGFC-201ENST00000274071 SPANXA2-OT1Q8N9U9 137 aa6.06□□□□□ -1.44
PDGFC-201ENST00000274071 K7EQZ3 153 aa6.06□□□□□ -1.44
PDGFC-201ENST00000274071 NOP10Q9NPE3 64 aaKnown RBP6.06□□□□□ -1.44
PDGFC-201ENST00000274071 KCNQ1DNQ9H478 68 aa6.06□□□□□ -1.44
PDGFC-201ENST00000274071 ACANP16112 2415 aa6.05□□□□□ -1.44
PDGFC-201ENST00000274071 PDZD2O15018 2839 aa6.05□□□□□ -1.44
PDGFC-201ENST00000274071 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
PDGFC-201ENST00000274071 UNC79Q9P2D8 2635 aa6.05□□□□□ -1.44
PDGFC-201ENST00000274071 MP68P56378 58 aa6.04□□□□□ -1.44
PDGFC-201ENST00000274071 UNQ6190/PRO20217Q6UXQ8 127 aa6.04□□□□□ -1.44
PDGFC-201ENST00000274071 MAP6D1Q9H9H5 199 aa6.04□□□□□ -1.44
PDGFC-201ENST00000274071 WFDC10AQ9H1F0 79 aa6.04□□□□□ -1.44
PDGFC-201ENST00000274071 J3QKU1 62 aa6.03□□□□□ -1.44
PDGFC-201ENST00000274071 FLNBO75369 2602 aaKnown RBP6.03□□□□□ -1.44
PDGFC-201ENST00000274071 VPREB1P12018 145 aa6.03□□□□□ -1.44
PDGFC-201ENST00000274071 SPINK7P58062 85 aa6.03□□□□□ -1.44
PDGFC-201ENST00000274071 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
PDGFC-201ENST00000274071 KHDC1LQ5JSQ8 128 aa6.03□□□□□ -1.44
PDGFC-201ENST00000274071 ODF3L2Q3SX64 289 aa6.03□□□□□ -1.44
PDGFC-201ENST00000274071 KPRPQ5T749 579 aaPredicted RBP6.03□□□□□ -1.44
PDGFC-201ENST00000274071 A0A1W2PNM2 257 aa6.02□□□□□ -1.45
PDGFC-201ENST00000274071 DNAJC9-AS1A6NH13 148 aa6.02□□□□□ -1.45
PDGFC-201ENST00000274071 COA5Q86WW8 74 aa6.02□□□□□ -1.45
PDGFC-201ENST00000274071 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
PDGFC-201ENST00000274071 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 DEFB136Q30KP8 78 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 C18orf65Q6ZTR6 163 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 MTORP42345 2549 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 IGLV5-48A0A075B6I7 105 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 XAGE1AQ9HD64 81 aa6.01□□□□□ -1.45
PDGFC-201ENST00000274071 ANK3Q12955 4377 aaKnown RBP6.01□□□□□ -1.45
PDGFC-201ENST00000274071 SETD2Q9BYW2 2564 aaPredicted RBP6□□□□□ -1.45
PDGFC-201ENST00000274071 SLURP1P55000 103 aa6□□□□□ -1.45
PDGFC-201ENST00000274071 CHCHD10Q8WYQ3 142 aaPredicted RBP6□□□□□ -1.45
PDGFC-201ENST00000274071 PLAC8Q9NZF1 115 aa6□□□□□ -1.45
PDGFC-201ENST00000274071 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
PDGFC-201ENST00000274071 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
PDGFC-201ENST00000274071 A0A0J9YWU9 116 aa5.99□□□□□ -1.45
PDGFC-201ENST00000274071 A0A1B0GW54 56 aa5.99□□□□□ -1.45
PDGFC-201ENST00000274071 SPAG11BQ08648 103 aa5.99□□□□□ -1.45
PDGFC-201ENST00000274071 DEFB105AQ8NG35 78 aa5.99□□□□□ -1.45
PDGFC-201ENST00000274071 OTOGQ6ZRI0 2925 aa5.99□□□□□ -1.45
PDGFC-201ENST00000274071 CYSRT1A8MQ03 144 aa5.99□□□□□ -1.45
PDGFC-201ENST00000274071 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
PDGFC-201ENST00000274071 Q8N377 158 aa5.98□□□□□ -1.45
PDGFC-201ENST00000274071 Q8NAQ8 132 aa5.98□□□□□ -1.45
PDGFC-201ENST00000274071 PLA2G1BP04054 148 aaKnown RBP5.98□□□□□ -1.45
PDGFC-201ENST00000274071 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
PDGFC-201ENST00000274071 C4orf3Q8WVX3 66 aa5.97□□□□□ -1.45
PDGFC-201ENST00000274071 KRTAP1-1Q07627 177 aa5.97□□□□□ -1.45
PDGFC-201ENST00000274071 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
PDGFC-201ENST00000274071 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.45
PDGFC-201ENST00000274071 H0Y9P7 68 aa5.96□□□□□ -1.46
PDGFC-201ENST00000274071 IGKV2D-24A0A075B6R9 120 aa5.95□□□□□ -1.46
PDGFC-201ENST00000274071 CNBPP62633 177 aaKnown RBP5.95□□□□□ -1.46
PDGFC-201ENST00000274071 C1orf137Q5JT78 98 aa5.94□□□□□ -1.46
PDGFC-201ENST00000274071 WFDC10BQ8IUB3 73 aa5.94□□□□□ -1.46
PDGFC-201ENST00000274071 Q8NBF4 154 aa5.94□□□□□ -1.46
PDGFC-201ENST00000274071 SPRR4Q96PI1 79 aa5.94□□□□□ -1.46
PDGFC-201ENST00000274071 H3BPC8 53 aa5.94□□□□□ -1.46
PDGFC-201ENST00000274071 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
PDGFC-201ENST00000274071 REG3AQ06141 175 aa5.93□□□□□ -1.46
PDGFC-201ENST00000274071 A0A096LPF7 62 aa5.93□□□□□ -1.46
PDGFC-201ENST00000274071 C7orf33Q8WU49 177 aa5.92□□□□□ -1.46
PDGFC-201ENST00000274071 C16orf74Q96GX8 76 aa5.92□□□□□ -1.46
PDGFC-201ENST00000274071 C6orf48Q9UBA6 75 aa5.92□□□□□ -1.46
PDGFC-201ENST00000274071 HIVEP2P31629 2446 aa5.92□□□□□ -1.46
PDGFC-201ENST00000274071 ANGP03950 147 aaKnown RBP5.92□□□□□ -1.46
PDGFC-201ENST00000274071 GYPEP15421 78 aa5.92□□□□□ -1.46
PDGFC-201ENST00000274071 LINC00476Q8WZB0 136 aa5.92□□□□□ -1.46
PDGFC-201ENST00000274071 SMR3AQ99954 134 aa5.91□□□□□ -1.46
PDGFC-201ENST00000274071 GIG44P09565 113 aaPredicted RBP5.91□□□□□ -1.46
PDGFC-201ENST00000274071 TNP2Q05952 138 aa5.91□□□□□ -1.46
PDGFC-201ENST00000274071 SETXQ7Z333 2677 aaKnown RBP5.91□□□□□ -1.46
PDGFC-201ENST00000274071 GVQW2A0A096LPI5 108 aaPredicted RBP5.91□□□□□ -1.46
PDGFC-201ENST00000274071 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
PDGFC-201ENST00000274071 CSNK1G2-AS1Q8NCQ2 148 aa5.91□□□□□ -1.46
PDGFC-201ENST00000274071 IGLV1-50A0A075B6I6 118 aa5.89□□□□□ -1.47
PDGFC-201ENST00000274071 JMJD1CQ15652 2540 aa5.89□□□□□ -1.47
PDGFC-201ENST00000274071 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
PDGFC-201ENST00000274071 RTL8CO15255 209 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms