RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ETDCA0A1B0GVM5 59 aa4.92□□□□□ -1.62
TPM3-201ENST00000271850 LINC01547P58512 204 aaPredicted RBP4.92□□□□□ -1.62
TPM3-201ENST00000271850 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
TPM3-201ENST00000271850 MEIG1Q5JSS6 88 aa4.92□□□□□ -1.62
TPM3-201ENST00000271850 ARL17AQ8IVW1 177 aa4.92□□□□□ -1.62
TPM3-201ENST00000271850 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
TPM3-201ENST00000271850 NDUFA12Q9UI09 145 aa4.92□□□□□ -1.62
TPM3-201ENST00000271850 SEC61BP60468 96 aaKnown RBP4.91□□□□□ -1.62
TPM3-201ENST00000271850 MT1HP80294 61 aa4.91□□□□□ -1.62
TPM3-201ENST00000271850 FAM19A2Q8N3H0 131 aa4.91□□□□□ -1.62
TPM3-201ENST00000271850 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.62
TPM3-201ENST00000271850 HERV-K104P63124 156 aa4.9□□□□□ -1.63
TPM3-201ENST00000271850 SOSTDC1Q6X4U4 206 aa4.9□□□□□ -1.63
TPM3-201ENST00000271850 Q6ZRX8 168 aa4.9□□□□□ -1.63
TPM3-201ENST00000271850 SSBP3-AS1Q7Z2R9 100 aa4.9□□□□□ -1.63
TPM3-201ENST00000271850 ST20-AS1Q8NBB2 130 aa4.9□□□□□ -1.63
TPM3-201ENST00000271850 CHCHD1Q96BP2 118 aaKnown RBP4.9□□□□□ -1.63
TPM3-201ENST00000271850 IGLV6-57P01721 117 aa4.89□□□□□ -1.63
TPM3-201ENST00000271850 DDTP30046 118 aa4.89□□□□□ -1.63
TPM3-201ENST00000271850 TRBV10-2A0A0K0K1G8 114 aa4.88□□□□□ -1.63
TPM3-201ENST00000271850 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
TPM3-201ENST00000271850 MYMXA0A1B0GTQ4 84 aa4.87□□□□□ -1.63
TPM3-201ENST00000271850 LEPROTO15243 131 aa4.87□□□□□ -1.63
TPM3-201ENST00000271850 SLC25A20O43772 301 aa4.87□□□□□ -1.63
TPM3-201ENST00000271850 ATP6V1G1O75348 118 aa4.87□□□□□ -1.63
TPM3-201ENST00000271850 APOC3P02656 99 aa4.87□□□□□ -1.63
TPM3-201ENST00000271850 H0Y8G0 127 aa4.86□□□□□ -1.63
TPM3-201ENST00000271850 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
TPM3-201ENST00000271850 PMCHL2Q9BQD1 86 aa4.86□□□□□ -1.63
TPM3-201ENST00000271850 SPANXB1Q9NS25 103 aaPredicted RBP4.86□□□□□ -1.63
TPM3-201ENST00000271850 TRAV23DV6A0A075B6W5 121 aa4.85□□□□□ -1.63
TPM3-201ENST00000271850 J3QQQ9 107 aa4.85□□□□□ -1.63
TPM3-201ENST00000271850 NDUFC2O95298 119 aa4.85□□□□□ -1.63
TPM3-201ENST00000271850 PCOTHQ58A44 107 aa4.85□□□□□ -1.63
TPM3-201ENST00000271850 C9orf153Q5TBE3 101 aa4.85□□□□□ -1.63
TPM3-201ENST00000271850 LINC00587B1AMM8 73 aa4.84□□□□□ -1.63
TPM3-201ENST00000271850 SPRR1BP22528 89 aa4.84□□□□□ -1.63
TPM3-201ENST00000271850 NPC2P61916 151 aa4.84□□□□□ -1.63
TPM3-201ENST00000271850 MAP1LC3CQ9BXW4 147 aa4.84□□□□□ -1.63
TPM3-201ENST00000271850 ZNF73O43830 326 aaPredicted RBP4.83□□□□□ -1.64
TPM3-201ENST00000271850 HSBP1O75506 76 aa4.83□□□□□ -1.64
TPM3-201ENST00000271850 SERF1AO75920 110 aa4.83□□□□□ -1.64
TPM3-201ENST00000271850 SNAPINO95295 136 aa4.83□□□□□ -1.64
TPM3-201ENST00000271850 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
TPM3-201ENST00000271850 SVBPQ8N300 66 aa4.83□□□□□ -1.64
TPM3-201ENST00000271850 LITAFQ99732 161 aa4.83□□□□□ -1.64
TPM3-201ENST00000271850 A0A0J9YXY3 114 aa4.82□□□□□ -1.64
TPM3-201ENST00000271850 C9orf92A6NGG3 77 aa4.82□□□□□ -1.64
TPM3-201ENST00000271850 LEPROTL1O95214 131 aa4.82□□□□□ -1.64
TPM3-201ENST00000271850 TRGC2P03986 189 aa4.82□□□□□ -1.64
TPM3-201ENST00000271850 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
TPM3-201ENST00000271850 IGLV8-61A0A075B6I0 122 aa4.81□□□□□ -1.64
TPM3-201ENST00000271850 PLNP26678 52 aa4.81□□□□□ -1.64
TPM3-201ENST00000271850 NMUP48645 174 aa4.81□□□□□ -1.64
TPM3-201ENST00000271850 S100A7L2Q5SY68 101 aa4.81□□□□□ -1.64
TPM3-201ENST00000271850 DPM2O94777 84 aa4.8□□□□□ -1.64
TPM3-201ENST00000271850 IGKCP01834 107 aa4.8□□□□□ -1.64
TPM3-201ENST00000271850 S100A12P80511 92 aa4.8□□□□□ -1.64
TPM3-201ENST00000271850 FABP4P15090 132 aa4.79□□□□□ -1.64
TPM3-201ENST00000271850 LGALS3P17931 250 aaKnown RBP4.79□□□□□ -1.64
TPM3-201ENST00000271850 JOSD1Q15040 202 aaPredicted RBP4.79□□□□□ -1.64
TPM3-201ENST00000271850 MIEN1Q9BRT3 115 aa4.79□□□□□ -1.64
TPM3-201ENST00000271850 A0A0G2JQZ4 141 aa4.78□□□□□ -1.64
TPM3-201ENST00000271850 C5orf52A6NGY3 159 aa4.78□□□□□ -1.64
TPM3-201ENST00000271850 E9PLD3 99 aa4.78□□□□□ -1.64
TPM3-201ENST00000271850 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
TPM3-201ENST00000271850 SMIM29Q86T20 159 aa4.78□□□□□ -1.64
TPM3-201ENST00000271850 LINC00308Q8TCZ7 52 aa4.78□□□□□ -1.64
TPM3-201ENST00000271850 HERVK_113P61574 105 aa4.77□□□□□ -1.65
TPM3-201ENST00000271850 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
TPM3-201ENST00000271850 H7C2G1 150 aa4.76□□□□□ -1.65
TPM3-201ENST00000271850 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
TPM3-201ENST00000271850 NDUFA5Q16718 116 aa4.76□□□□□ -1.65
TPM3-201ENST00000271850 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
TPM3-201ENST00000271850 SPANXCQ9NY87 97 aa4.76□□□□□ -1.65
TPM3-201ENST00000271850 HSPB8Q9UJY1 196 aa4.76□□□□□ -1.65
TPM3-201ENST00000271850 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
TPM3-201ENST00000271850 Q1RN00 199 aa4.75□□□□□ -1.65
TPM3-201ENST00000271850 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
TPM3-201ENST00000271850 COLCA2A8K830 154 aa4.74□□□□□ -1.65
TPM3-201ENST00000271850 C6orf99Q4VX62 202 aa4.74□□□□□ -1.65
TPM3-201ENST00000271850 Q5XG85 94 aa4.74□□□□□ -1.65
TPM3-201ENST00000271850 DHRS4-AS1Q9P1J3 65 aa4.74□□□□□ -1.65
TPM3-201ENST00000271850 TIMM17BO60830 172 aa4.73□□□□□ -1.65
TPM3-201ENST00000271850 COX7BP24311 80 aa4.73□□□□□ -1.65
TPM3-201ENST00000271850 RPL37P61927 97 aaKnown RBP4.73□□□□□ -1.65
TPM3-201ENST00000271850 CD164Q04900 197 aa4.73□□□□□ -1.65
TPM3-201ENST00000271850 OR13C6PQ8NH95 151 aa4.73□□□□□ -1.65
TPM3-201ENST00000271850 SPANXDQ9BXN6 97 aa4.73□□□□□ -1.65
TPM3-201ENST00000271850 LAMTOR3Q9UHA4 124 aa4.73□□□□□ -1.65
TPM3-201ENST00000271850 SYS1-DBNDD2H3BUS1 97 aa4.72□□□□□ -1.65
TPM3-201ENST00000271850 LINC01545Q5VT33 79 aa4.72□□□□□ -1.65
TPM3-201ENST00000271850 DEFB105AQ8NG35 78 aa4.72□□□□□ -1.65
TPM3-201ENST00000271850 IGLV5-48A0A075B6I7 105 aa4.71□□□□□ -1.66
TPM3-201ENST00000271850 HINT1P49773 126 aaPredicted RBP4.71□□□□□ -1.66
TPM3-201ENST00000271850 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
TPM3-201ENST00000271850 SLC25A34Q6PIV7 304 aa4.71□□□□□ -1.66
TPM3-201ENST00000271850 TEX49A0A1B0GTD5 131 aa4.7□□□□□ -1.66
TPM3-201ENST00000271850 ZNF815PA8K554 130 aa4.7□□□□□ -1.66
TPM3-201ENST00000271850 PRO1933Q9H354 126 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms