RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 Q96NJ1 140 aa6.73□□□□□ -1.33
LAMA3-201ENST00000269217 C9orf129Q5T035 196 aaKnown RBP6.73□□□□□ -1.33
LAMA3-201ENST00000269217 COA5Q86WW8 74 aa6.73□□□□□ -1.33
LAMA3-201ENST00000269217 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
LAMA3-201ENST00000269217 MKI67P46013 3256 aaKnown RBP6.72□□□□□ -1.33
LAMA3-201ENST00000269217 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
LAMA3-201ENST00000269217 PRR15Q8IV56 129 aa6.72□□□□□ -1.33
LAMA3-201ENST00000269217 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
LAMA3-201ENST00000269217 KRTAP10-11P60412 298 aa6.71□□□□□ -1.34
LAMA3-201ENST00000269217 BRCA2P51587 3418 aa6.71□□□□□ -1.34
LAMA3-201ENST00000269217 LAMA3Q16787 3333 aa6.71□□□□□ -1.34
LAMA3-201ENST00000269217 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
LAMA3-201ENST00000269217 A8MUN3 132 aa6.7□□□□□ -1.34
LAMA3-201ENST00000269217 WWC2-AS2Q96NR7 200 aa6.69□□□□□ -1.34
LAMA3-201ENST00000269217 K7EIL1 84 aa6.68□□□□□ -1.34
LAMA3-201ENST00000269217 IGLV8-61A0A075B6I0 122 aa6.68□□□□□ -1.34
LAMA3-201ENST00000269217 KRTAP10-3P60369 221 aa6.68□□□□□ -1.34
LAMA3-201ENST00000269217 CHD7Q9P2D1 2997 aa6.68□□□□□ -1.34
LAMA3-201ENST00000269217 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
LAMA3-201ENST00000269217 A0A1B0GVX0 72 aa6.67□□□□□ -1.34
LAMA3-201ENST00000269217 SSBP3-AS1Q7Z2R9 100 aa6.67□□□□□ -1.34
LAMA3-201ENST00000269217 ZNF861PO60384 105 aa6.67□□□□□ -1.34
LAMA3-201ENST00000269217 C5orf42Q9H799 3197 aa6.67□□□□□ -1.34
LAMA3-201ENST00000269217 H7BZZ5 65 aa6.67□□□□□ -1.34
LAMA3-201ENST00000269217 F8P00451 2351 aa6.66□□□□□ -1.34
LAMA3-201ENST00000269217 LINC01600Q96MT4 127 aa6.66□□□□□ -1.34
LAMA3-201ENST00000269217 HTTP42858 3142 aa6.66□□□□□ -1.34
LAMA3-201ENST00000269217 FLNBO75369 2602 aaKnown RBP6.66□□□□□ -1.34
LAMA3-201ENST00000269217 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.34
LAMA3-201ENST00000269217 LAMA2P24043 3122 aaKnown RBP6.65□□□□□ -1.34
LAMA3-201ENST00000269217 UQCR11O14957 56 aa6.64□□□□□ -1.35
LAMA3-201ENST00000269217 DSCR10P59022 87 aa6.64□□□□□ -1.35
LAMA3-201ENST00000269217 A0A087WTM6 91 aa6.62□□□□□ -1.35
LAMA3-201ENST00000269217 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
LAMA3-201ENST00000269217 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
LAMA3-201ENST00000269217 A0A1W2PNM2 257 aa6.62□□□□□ -1.35
LAMA3-201ENST00000269217 ZNF575Q86XF7 245 aa6.61□□□□□ -1.35
LAMA3-201ENST00000269217 OBSCN-AS1Q96MR7 158 aa6.61□□□□□ -1.35
LAMA3-201ENST00000269217 CNBPP62633 177 aaKnown RBP6.6□□□□□ -1.35
LAMA3-201ENST00000269217 LINC00304Q8N9R0 145 aa6.6□□□□□ -1.35
LAMA3-201ENST00000269217 PRUNE2Q8WUY3 3088 aa6.59□□□□□ -1.35
LAMA3-201ENST00000269217 KRTAP1-3Q8IUG1 177 aa6.59□□□□□ -1.35
LAMA3-201ENST00000269217 IGLV5-48A0A075B6I7 105 aa6.59□□□□□ -1.36
LAMA3-201ENST00000269217 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.36
LAMA3-201ENST00000269217 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
LAMA3-201ENST00000269217 CASC10Q5T4H9 136 aa6.57□□□□□ -1.36
LAMA3-201ENST00000269217 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
LAMA3-201ENST00000269217 LINC00336Q6ZUF6 198 aa6.57□□□□□ -1.36
LAMA3-201ENST00000269217 SPANXA2-OT1Q8N9U9 137 aa6.57□□□□□ -1.36
LAMA3-201ENST00000269217 IGLV7-43P04211 117 aa6.57□□□□□ -1.36
LAMA3-201ENST00000269217 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
LAMA3-201ENST00000269217 APLNQ9ULZ1 77 aa6.55□□□□□ -1.36
LAMA3-201ENST00000269217 KRTAP1-1Q07627 177 aa6.55□□□□□ -1.36
LAMA3-201ENST00000269217 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
LAMA3-201ENST00000269217 ANAPC11Q9NYG5 84 aa6.54□□□□□ -1.36
LAMA3-201ENST00000269217 CENPEQ02224 2701 aa6.54□□□□□ -1.36
LAMA3-201ENST00000269217 FAM104AQ969W3 186 aa6.52□□□□□ -1.37
LAMA3-201ENST00000269217 UNC80Q8N2C7 3258 aa6.52□□□□□ -1.37
LAMA3-201ENST00000269217 CHD9Q3L8U1 2897 aa6.52□□□□□ -1.37
LAMA3-201ENST00000269217 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
LAMA3-201ENST00000269217 OCR1Q9BZK8 76 aa6.51□□□□□ -1.37
LAMA3-201ENST00000269217 KTN1-AS1Q86SY8 53 aa6.47□□□□□ -1.37
LAMA3-201ENST00000269217 CRIPTQ9P021 101 aa6.47□□□□□ -1.37
LAMA3-201ENST00000269217 J3QL48 77 aa6.47□□□□□ -1.37
LAMA3-201ENST00000269217 CD164Q04900 197 aa6.47□□□□□ -1.37
LAMA3-201ENST00000269217 TRIOO75962 3097 aa6.46□□□□□ -1.37
LAMA3-201ENST00000269217 SMR3BP02814 79 aaPredicted RBP6.45□□□□□ -1.38
LAMA3-201ENST00000269217 XIRP2A4UGR9 3374 aa6.45□□□□□ -1.38
LAMA3-201ENST00000269217 USP24Q9UPU5 2620 aa6.45□□□□□ -1.38
LAMA3-201ENST00000269217 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
LAMA3-201ENST00000269217 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
LAMA3-201ENST00000269217 Q1T7F1 81 aa6.43□□□□□ -1.38
LAMA3-201ENST00000269217 LCA10Q71F78 164 aa6.43□□□□□ -1.38
LAMA3-201ENST00000269217 HECTD1Q9ULT8 2610 aa6.43□□□□□ -1.38
LAMA3-201ENST00000269217 WDFY4Q6ZS81 3184 aa6.42□□□□□ -1.38
LAMA3-201ENST00000269217 CR1P17927 2039 aa6.42□□□□□ -1.38
LAMA3-201ENST00000269217 CFAP54Q96N23 3096 aa6.42□□□□□ -1.38
LAMA3-201ENST00000269217 Q8N1X5 172 aa6.42□□□□□ -1.38
LAMA3-201ENST00000269217 MGAM2Q2M2H8 2515 aa6.41□□□□□ -1.38
LAMA3-201ENST00000269217 WIPF1O43516 503 aa6.41□□□□□ -1.38
LAMA3-201ENST00000269217 RBM12B-AS1Q9P1G2 102 aa6.4□□□□□ -1.39
LAMA3-201ENST00000269217 IGLV7-46A0A075B6I9 117 aa6.4□□□□□ -1.39
LAMA3-201ENST00000269217 BPTFQ12830 3046 aa6.39□□□□□ -1.39
LAMA3-201ENST00000269217 PRR26Q8N8Z3 221 aa6.39□□□□□ -1.39
LAMA3-201ENST00000269217 FLNAP21333 2647 aaKnown RBP6.38□□□□□ -1.39
LAMA3-201ENST00000269217 TRANK1O15050 2925 aa6.38□□□□□ -1.39
LAMA3-201ENST00000269217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.37□□□□□ -1.39
LAMA3-201ENST00000269217 SPRR1AP35321 89 aa6.37□□□□□ -1.39
LAMA3-201ENST00000269217 Q8NDZ9 215 aa6.36□□□□□ -1.39
LAMA3-201ENST00000269217 TNP2Q05952 138 aa6.36□□□□□ -1.39
LAMA3-201ENST00000269217 ATRQ13535 2644 aa6.36□□□□□ -1.39
LAMA3-201ENST00000269217 MAP1AP78559 2803 aaPredicted RBP6.35□□□□□ -1.39
LAMA3-201ENST00000269217 MAST4O15021 2626 aa6.35□□□□□ -1.39
LAMA3-201ENST00000269217 MGAQ8IWI9 3026 aa6.34□□□□□ -1.39
LAMA3-201ENST00000269217 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
LAMA3-201ENST00000269217 CDH23Q9H251 3354 aa6.34□□□□□ -1.4
LAMA3-201ENST00000269217 A0A0D9SG42 100 aa6.33□□□□□ -1.4
LAMA3-201ENST00000269217 HRES1P13985 223 aa6.33□□□□□ -1.4
LAMA3-201ENST00000269217 FAM229BQ4G0N7 80 aa6.33□□□□□ -1.4
LAMA3-201ENST00000269217 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms