RNA–Protein interactions for RNA: ENST00000266088.8

SLC5A1-201, Transcript of solute carrier family 5 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A1, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A1-201ENST00000266088 PRO0461Q9UI25 63 aa5.82□□□□□ -1.48
SLC5A1-201ENST00000266088 Q8N9L7 120 aa5.82□□□□□ -1.48
SLC5A1-201ENST00000266088 SMCR5Q8TEV8 140 aa5.82□□□□□ -1.48
SLC5A1-201ENST00000266088 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
SLC5A1-201ENST00000266088 C19orf73Q9NVV2 129 aa5.81□□□□□ -1.48
SLC5A1-201ENST00000266088 NBEAL1Q6ZS30 2694 aa5.81□□□□□ -1.48
SLC5A1-201ENST00000266088 WWC2-AS2Q96NR7 200 aa5.8□□□□□ -1.48
SLC5A1-201ENST00000266088 GIG44P09565 113 aaPredicted RBP5.8□□□□□ -1.48
SLC5A1-201ENST00000266088 NOTCH1P46531 2555 aa5.8□□□□□ -1.48
SLC5A1-201ENST00000266088 ITPR2Q14571 2701 aa5.8□□□□□ -1.48
SLC5A1-201ENST00000266088 PSPHP1O15172 72 aa5.8□□□□□ -1.48
SLC5A1-201ENST00000266088 IGHV6-1A0A0B4J1U7 121 aa5.8□□□□□ -1.48
SLC5A1-201ENST00000266088 FAM30AQ9NZY2 134 aa5.79□□□□□ -1.48
SLC5A1-201ENST00000266088 RTL8CO15255 209 aa5.77□□□□□ -1.49
SLC5A1-201ENST00000266088 CHTF8P0CG12 524 aa5.77□□□□□ -1.49
SLC5A1-201ENST00000266088 PHF5AQ7RTV0 110 aaKnown RBP5.77□□□□□ -1.49
SLC5A1-201ENST00000266088 CSMD1Q96PZ7 3565 aa5.77□□□□□ -1.49
SLC5A1-201ENST00000266088 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
SLC5A1-201ENST00000266088 DNAH10OSP0CZ25 163 aa5.77□□□□□ -1.49
SLC5A1-201ENST00000266088 KIAA0087Q14695 138 aa5.77□□□□□ -1.49
SLC5A1-201ENST00000266088 LRBAP50851 2863 aa5.76□□□□□ -1.49
SLC5A1-201ENST00000266088 UBR5O95071 2799 aaPredicted RBP5.76□□□□□ -1.49
SLC5A1-201ENST00000266088 VPREB1P12018 145 aa5.75□□□□□ -1.49
SLC5A1-201ENST00000266088 C16orf90A8MZG2 172 aa5.75□□□□□ -1.49
SLC5A1-201ENST00000266088 RETNLBQ9BQ08 111 aa5.75□□□□□ -1.49
SLC5A1-201ENST00000266088 LINC00846Q9NV44 126 aa5.75□□□□□ -1.49
SLC5A1-201ENST00000266088 ITPR1Q14643 2758 aa5.75□□□□□ -1.49
SLC5A1-201ENST00000266088 TRBV7-6A0A0J9YX20 115 aa5.75□□□□□ -1.49
SLC5A1-201ENST00000266088 SERTAD4-AS1Q5TG53 156 aa5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 LINC00208Q96KT6 92 aa5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 GVQW2A0A096LPI5 108 aaPredicted RBP5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 TRBV7-7A0A0K0K1E9 115 aa5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 Q6ZRP5 223 aa5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 Q6ZVQ6 151 aa5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
SLC5A1-201ENST00000266088 MOBPQ13875 183 aa5.73□□□□□ -1.49
SLC5A1-201ENST00000266088 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
SLC5A1-201ENST00000266088 SPATA3Q8NHX4 192 aa5.73□□□□□ -1.49
SLC5A1-201ENST00000266088 CR1P17927 2039 aa5.72□□□□□ -1.49
SLC5A1-201ENST00000266088 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
SLC5A1-201ENST00000266088 SPACA4Q8TDM5 124 aa5.72□□□□□ -1.49
SLC5A1-201ENST00000266088 LINC00612Q8N6U2 182 aa5.71□□□□□ -1.49
SLC5A1-201ENST00000266088 FAM168BA1KXE4 195 aa5.71□□□□□ -1.5
SLC5A1-201ENST00000266088 CRYGAP11844 174 aa5.71□□□□□ -1.5
SLC5A1-201ENST00000266088 LITAFQ99732 161 aa5.71□□□□□ -1.5
SLC5A1-201ENST00000266088 RELNP78509 3460 aa5.71□□□□□ -1.5
SLC5A1-201ENST00000266088 EPM2AB3EWF7 344 aa5.71□□□□□ -1.5
SLC5A1-201ENST00000266088 ELOF1P60002 83 aaKnown RBP5.71□□□□□ -1.5
SLC5A1-201ENST00000266088 Q6ZRX8 168 aa5.71□□□□□ -1.5
SLC5A1-201ENST00000266088 ST20-AS1Q8NBB2 130 aa5.7□□□□□ -1.5
SLC5A1-201ENST00000266088 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
SLC5A1-201ENST00000266088 EIF4EBP3O60516 100 aaPredicted RBP5.7□□□□□ -1.5
SLC5A1-201ENST00000266088 SVEP1Q4LDE5 3571 aa5.69□□□□□ -1.5
SLC5A1-201ENST00000266088 SPENQ96T58 3664 aaKnown RBP5.69□□□□□ -1.5
SLC5A1-201ENST00000266088 LIMD2Q9BT23 127 aa5.69□□□□□ -1.5
SLC5A1-201ENST00000266088 FAM229AH3BQW9 127 aa5.69□□□□□ -1.5
SLC5A1-201ENST00000266088 PRR34Q9NV39 138 aa5.69□□□□□ -1.5
SLC5A1-201ENST00000266088 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
SLC5A1-201ENST00000266088 LINC01600Q96MT4 127 aa5.67□□□□□ -1.5
SLC5A1-201ENST00000266088 UTP20O75691 2785 aaKnown RBP5.67□□□□□ -1.5
SLC5A1-201ENST00000266088 HCG22E2RYF7 251 aa5.66□□□□□ -1.5
SLC5A1-201ENST00000266088 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
SLC5A1-201ENST00000266088 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
SLC5A1-201ENST00000266088 BCE1O60756 84 aa5.65□□□□□ -1.5
SLC5A1-201ENST00000266088 H0Y9P7 68 aa5.64□□□□□ -1.51
SLC5A1-201ENST00000266088 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
SLC5A1-201ENST00000266088 IGLV6-57P01721 117 aa5.64□□□□□ -1.51
SLC5A1-201ENST00000266088 NSD1Q96L73 2696 aaPredicted RBP5.64□□□□□ -1.51
SLC5A1-201ENST00000266088 FAM104AQ969W3 186 aa5.64□□□□□ -1.51
SLC5A1-201ENST00000266088 HIVEP1P15822 2718 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 NBEAL2Q6ZNJ1 2754 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 CRYBG3Q68DQ2 2970 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 Q8NBF4 154 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 CASC10Q5T4H9 136 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 IGKV2D-30A0A075B6S6 120 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 A0A087WTM6 91 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 SPINK1P00995 79 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
SLC5A1-201ENST00000266088 ZANQ9Y493 2812 aa5.62□□□□□ -1.51
SLC5A1-201ENST00000266088 ASH1LQ9NR48 2969 aaKnown RBP5.62□□□□□ -1.51
SLC5A1-201ENST00000266088 CXCL6P80162 114 aa5.62□□□□□ -1.51
SLC5A1-201ENST00000266088 APCP25054 2843 aa5.62□□□□□ -1.51
SLC5A1-201ENST00000266088 IGLV1-50A0A075B6I6 118 aa5.62□□□□□ -1.51
SLC5A1-201ENST00000266088 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
SLC5A1-201ENST00000266088 APLNQ9ULZ1 77 aa5.61□□□□□ -1.51
SLC5A1-201ENST00000266088 WIPF1O43516 503 aa5.61□□□□□ -1.51
SLC5A1-201ENST00000266088 Q6ZQT0 140 aa5.61□□□□□ -1.51
SLC5A1-201ENST00000266088 SMIM29Q86T20 159 aa5.61□□□□□ -1.51
SLC5A1-201ENST00000266088 PLA2G1BP04054 148 aaKnown RBP5.61□□□□□ -1.51
SLC5A1-201ENST00000266088 C9orf163Q8N9P6 203 aa5.6□□□□□ -1.51
SLC5A1-201ENST00000266088 SMR3BP02814 79 aaPredicted RBP5.6□□□□□ -1.51
SLC5A1-201ENST00000266088 C9orf129Q5T035 196 aaKnown RBP5.6□□□□□ -1.51
SLC5A1-201ENST00000266088 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
SLC5A1-201ENST00000266088 RPL37AP61513 92 aaKnown RBP5.59□□□□□ -1.51
SLC5A1-201ENST00000266088 SPAG11AQ6PDA7 123 aa5.59□□□□□ -1.51
SLC5A1-201ENST00000266088 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
SLC5A1-201ENST00000266088 LINC00528Q8N1L1 170 aa5.58□□□□□ -1.52
SLC5A1-201ENST00000266088 CELSR2Q9HCU4 2923 aa5.58□□□□□ -1.52
SLC5A1-201ENST00000266088 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms