RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 VPREB1P12018 145 aa9.54□□□□□ -0.88
PDLIM2-201ENST00000265810 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
PDLIM2-201ENST00000265810 H0Y9J4 135 aa9.53□□□□□ -0.88
PDLIM2-201ENST00000265810 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
PDLIM2-201ENST00000265810 NDUFS5O43920 106 aa9.52□□□□□ -0.88
PDLIM2-201ENST00000265810 FAM236AA0A1B0GUQ0 79 aa9.52□□□□□ -0.89
PDLIM2-201ENST00000265810 FAM236BA0A1B0GV22 79 aa9.52□□□□□ -0.89
PDLIM2-201ENST00000265810 SERTAD4-AS1Q5TG53 156 aa9.51□□□□□ -0.89
PDLIM2-201ENST00000265810 SMCR5Q8TEV8 140 aa9.51□□□□□ -0.89
PDLIM2-201ENST00000265810 OTOGQ6ZRI0 2925 aa9.49□□□□□ -0.89
PDLIM2-201ENST00000265810 SVEP1Q4LDE5 3571 aa9.49□□□□□ -0.89
PDLIM2-201ENST00000265810 CDIP1Q9H305 208 aa9.48□□□□□ -0.89
PDLIM2-201ENST00000265810 A0A087WTM6 91 aa9.48□□□□□ -0.89
PDLIM2-201ENST00000265810 Q9BRP9 147 aa9.48□□□□□ -0.89
PDLIM2-201ENST00000265810 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
PDLIM2-201ENST00000265810 ELOF1P60002 83 aaKnown RBP9.48□□□□□ -0.89
PDLIM2-201ENST00000265810 CCDC179H3BU77 68 aa9.47□□□□□ -0.89
PDLIM2-201ENST00000265810 IGLV6-57P01721 117 aa9.47□□□□□ -0.89
PDLIM2-201ENST00000265810 CSMD1Q96PZ7 3565 aa9.47□□□□□ -0.89
PDLIM2-201ENST00000265810 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.89
PDLIM2-201ENST00000265810 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
PDLIM2-201ENST00000265810 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
PDLIM2-201ENST00000265810 C9orf163Q8N9P6 203 aa9.45□□□□□ -0.9
PDLIM2-201ENST00000265810 Q6ZRX8 168 aa9.44□□□□□ -0.9
PDLIM2-201ENST00000265810 PRO0461Q9UI25 63 aa9.44□□□□□ -0.9
PDLIM2-201ENST00000265810 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
PDLIM2-201ENST00000265810 STAB2Q8WWQ8 2551 aa9.43□□□□□ -0.9
PDLIM2-201ENST00000265810 C3orf22Q8N5N4 141 aa9.42□□□□□ -0.9
PDLIM2-201ENST00000265810 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
PDLIM2-201ENST00000265810 ATOX1O00244 68 aa9.41□□□□□ -0.9
PDLIM2-201ENST00000265810 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
PDLIM2-201ENST00000265810 ATP5EP2Q5VTU8 51 aa9.41□□□□□ -0.9
PDLIM2-201ENST00000265810 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
PDLIM2-201ENST00000265810 CSMD2Q7Z408 3487 aa9.41□□□□□ -0.9
PDLIM2-201ENST00000265810 IGLV1-50A0A075B6I6 118 aa9.4□□□□□ -0.9
PDLIM2-201ENST00000265810 LINC00476Q8WZB0 136 aa9.4□□□□□ -0.9
PDLIM2-201ENST00000265810 EPM2AB3EWF7 344 aa9.4□□□□□ -0.9
PDLIM2-201ENST00000265810 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.91
PDLIM2-201ENST00000265810 J3KT08 172 aa9.39□□□□□ -0.91
PDLIM2-201ENST00000265810 TENM1Q9UKZ4 2725 aa9.39□□□□□ -0.91
PDLIM2-201ENST00000265810 Q6Q795 121 aa9.39□□□□□ -0.91
PDLIM2-201ENST00000265810 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
PDLIM2-201ENST00000265810 CNBPP62633 177 aaKnown RBP9.38□□□□□ -0.91
PDLIM2-201ENST00000265810 Q6JHZ5 121 aa9.38□□□□□ -0.91
PDLIM2-201ENST00000265810 A0A087WSZ3 146 aa9.37□□□□□ -0.91
PDLIM2-201ENST00000265810 A0A1W2PNN7 141 aa9.36□□□□□ -0.91
PDLIM2-201ENST00000265810 LINC00846Q9NV44 126 aa9.36□□□□□ -0.91
PDLIM2-201ENST00000265810 ZFHX3Q15911 3703 aa9.35□□□□□ -0.91
PDLIM2-201ENST00000265810 KRTAP1-5Q9BYS1 174 aa9.35□□□□□ -0.91
PDLIM2-201ENST00000265810 BCE1O60756 84 aa9.34□□□□□ -0.91
PDLIM2-201ENST00000265810 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
PDLIM2-201ENST00000265810 TNP2Q05952 138 aa9.33□□□□□ -0.92
PDLIM2-201ENST00000265810 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
PDLIM2-201ENST00000265810 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
PDLIM2-201ENST00000265810 MP68P56378 58 aa9.31□□□□□ -0.92
PDLIM2-201ENST00000265810 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
PDLIM2-201ENST00000265810 IMUPQ9GZP8 106 aa9.31□□□□□ -0.92
PDLIM2-201ENST00000265810 Q6ZVQ6 151 aa9.3□□□□□ -0.92
PDLIM2-201ENST00000265810 MOBPQ13875 183 aa9.29□□□□□ -0.92
PDLIM2-201ENST00000265810 A0A087WVE0 104 aa9.29□□□□□ -0.92
PDLIM2-201ENST00000265810 UQCRQO14949 82 aa9.29□□□□□ -0.92
PDLIM2-201ENST00000265810 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
PDLIM2-201ENST00000265810 Q6ZQT0 140 aa9.25□□□□□ -0.93
PDLIM2-201ENST00000265810 IGKV4-1P06312 121 aa9.24□□□□□ -0.93
PDLIM2-201ENST00000265810 VWFP04275 2813 aa9.24□□□□□ -0.93
PDLIM2-201ENST00000265810 C20orf197Q8N268 126 aa9.23□□□□□ -0.93
PDLIM2-201ENST00000265810 Q8NDZ9 215 aa9.23□□□□□ -0.93
PDLIM2-201ENST00000265810 LINC01547P58512 204 aaPredicted RBP9.22□□□□□ -0.93
PDLIM2-201ENST00000265810 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
PDLIM2-201ENST00000265810 FAM229AH3BQW9 127 aa9.21□□□□□ -0.93
PDLIM2-201ENST00000265810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.21□□□□□ -0.93
PDLIM2-201ENST00000265810 Q8NBF4 154 aa9.21□□□□□ -0.93
PDLIM2-201ENST00000265810 PSORS1C2Q9UIG4 136 aa9.21□□□□□ -0.93
PDLIM2-201ENST00000265810 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.94
PDLIM2-201ENST00000265810 ERC2-IT1O76042 136 aa9.21□□□□□ -0.94
PDLIM2-201ENST00000265810 Q8N377 158 aa9.21□□□□□ -0.94
PDLIM2-201ENST00000265810 IGLV5-37A0A075B6J1 123 aa9.2□□□□□ -0.94
PDLIM2-201ENST00000265810 LOC110117498A0A087WWA1 95 aa9.2□□□□□ -0.94
PDLIM2-201ENST00000265810 Q8N9L7 120 aa9.2□□□□□ -0.94
PDLIM2-201ENST00000265810 IGHV6-1A0A0B4J1U7 121 aa9.2□□□□□ -0.94
PDLIM2-201ENST00000265810 ZNF861PO60384 105 aa9.19□□□□□ -0.94
PDLIM2-201ENST00000265810 CRYGAP11844 174 aa9.19□□□□□ -0.94
PDLIM2-201ENST00000265810 KRTAP21-3Q3LHN1 58 aa9.19□□□□□ -0.94
PDLIM2-201ENST00000265810 FBN1P35555 2871 aaKnown RBP9.19□□□□□ -0.94
PDLIM2-201ENST00000265810 RPL37AP61513 92 aaKnown RBP9.18□□□□□ -0.94
PDLIM2-201ENST00000265810 TENM3Q9P273 2699 aa9.16□□□□□ -0.94
PDLIM2-201ENST00000265810 SERP2Q8N6R1 65 aa9.15□□□□□ -0.94
PDLIM2-201ENST00000265810 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.94
PDLIM2-201ENST00000265810 COX7CP15954 63 aa9.15□□□□□ -0.94
PDLIM2-201ENST00000265810 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.94
PDLIM2-201ENST00000265810 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
PDLIM2-201ENST00000265810 A0A0G2JQZ4 141 aa9.14□□□□□ -0.95
PDLIM2-201ENST00000265810 TRBV7-7A0A0K0K1E9 115 aa9.14□□□□□ -0.95
PDLIM2-201ENST00000265810 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
PDLIM2-201ENST00000265810 TYMSOSQ8TAI1 123 aa9.13□□□□□ -0.95
PDLIM2-201ENST00000265810 IGLV7-43P04211 117 aa9.13□□□□□ -0.95
PDLIM2-201ENST00000265810 TMEM258P61165 79 aa9.12□□□□□ -0.95
PDLIM2-201ENST00000265810 CXCL6P80162 114 aa9.12□□□□□ -0.95
PDLIM2-201ENST00000265810 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
PDLIM2-201ENST00000265810 ANK3Q12955 4377 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms