RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 C9orf129Q5T035 196 aaKnown RBP5.36□□□□□ -1.55
GTF3C3-201ENST00000263956 C14orf132Q9NPU4 83 aa5.36□□□□□ -1.55
GTF3C3-201ENST00000263956 PLA2G2DQ9UNK4 145 aa5.36□□□□□ -1.55
GTF3C3-201ENST00000263956 BCE1O60756 84 aa5.35□□□□□ -1.55
GTF3C3-201ENST00000263956 Q6ZR54 194 aa5.35□□□□□ -1.55
GTF3C3-201ENST00000263956 NDUFB1O75438 58 aa5.35□□□□□ -1.55
GTF3C3-201ENST00000263956 ACYP1P07311 99 aa5.35□□□□□ -1.55
GTF3C3-201ENST00000263956 RPL37AP61513 92 aaKnown RBP5.35□□□□□ -1.55
GTF3C3-201ENST00000263956 IGLV1-50A0A075B6I6 118 aa5.34□□□□□ -1.56
GTF3C3-201ENST00000263956 IGLV6-57P01721 117 aa5.34□□□□□ -1.56
GTF3C3-201ENST00000263956 CCKP06307 115 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 Q9BRP9 147 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 SDIM1Q6ZPB5 146 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 Q6ZRX8 168 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 EPM2AB3EWF7 344 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 SS18L2Q9UHA2 77 aa5.33□□□□□ -1.56
GTF3C3-201ENST00000263956 KCNQ1DNQ9H478 68 aa5.32□□□□□ -1.56
GTF3C3-201ENST00000263956 Q6JHZ5 121 aa5.32□□□□□ -1.56
GTF3C3-201ENST00000263956 ANK3Q12955 4377 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-201ENST00000263956 XGP55808 180 aa5.31□□□□□ -1.56
GTF3C3-201ENST00000263956 CIRBP-AS1Q8TBR5 109 aa5.31□□□□□ -1.56
GTF3C3-201ENST00000263956 FBN1P35555 2871 aaKnown RBP5.31□□□□□ -1.56
GTF3C3-201ENST00000263956 CSMD1Q96PZ7 3565 aa5.31□□□□□ -1.56
GTF3C3-201ENST00000263956 EIF4EBP3O60516 100 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-201ENST00000263956 SMR3BP02814 79 aaPredicted RBP5.31□□□□□ -1.56
GTF3C3-201ENST00000263956 HRCT1Q6UXD1 115 aa5.31□□□□□ -1.56
GTF3C3-201ENST00000263956 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
GTF3C3-201ENST00000263956 IGLV5-37A0A075B6J1 123 aa5.29□□□□□ -1.56
GTF3C3-201ENST00000263956 CRYGAP11844 174 aa5.29□□□□□ -1.56
GTF3C3-201ENST00000263956 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-201ENST00000263956 H0Y9J4 135 aa5.28□□□□□ -1.56
GTF3C3-201ENST00000263956 SCXQ7RTU7 201 aa5.28□□□□□ -1.56
GTF3C3-201ENST00000263956 ZNF861PO60384 105 aa5.28□□□□□ -1.56
GTF3C3-201ENST00000263956 ZFHX3Q15911 3703 aa5.28□□□□□ -1.56
GTF3C3-201ENST00000263956 PSORS1C2Q9UIG4 136 aa5.28□□□□□ -1.56
GTF3C3-201ENST00000263956 LINC00528Q8N1L1 170 aa5.27□□□□□ -1.57
GTF3C3-201ENST00000263956 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
GTF3C3-201ENST00000263956 CSMD2Q7Z408 3487 aa5.27□□□□□ -1.57
GTF3C3-201ENST00000263956 BPY2O14599 106 aa5.27□□□□□ -1.57
GTF3C3-201ENST00000263956 SPINK6Q6UWN8 80 aa5.27□□□□□ -1.57
GTF3C3-201ENST00000263956 B5MCH6 92 aa5.26□□□□□ -1.57
GTF3C3-201ENST00000263956 IGLV7-43P04211 117 aa5.26□□□□□ -1.57
GTF3C3-201ENST00000263956 NDUFS5O43920 106 aa5.26□□□□□ -1.57
GTF3C3-201ENST00000263956 MOBPQ13875 183 aa5.25□□□□□ -1.57
GTF3C3-201ENST00000263956 KRTAP10-2P60368 255 aa5.25□□□□□ -1.57
GTF3C3-201ENST00000263956 FAM218AQ96MZ4 157 aa5.25□□□□□ -1.57
GTF3C3-201ENST00000263956 PLAC8Q9NZF1 115 aa5.25□□□□□ -1.57
GTF3C3-201ENST00000263956 Q6ZRN7 208 aaPredicted RBP5.25□□□□□ -1.57
GTF3C3-201ENST00000263956 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
GTF3C3-201ENST00000263956 VWFP04275 2813 aa5.25□□□□□ -1.57
GTF3C3-201ENST00000263956 IGKV3D-7A0A0C4DH55 119 aa5.24□□□□□ -1.57
GTF3C3-201ENST00000263956 TYMSOSQ8TAI1 123 aa5.24□□□□□ -1.57
GTF3C3-201ENST00000263956 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
GTF3C3-201ENST00000263956 Q8NBF4 154 aa5.23□□□□□ -1.57
GTF3C3-201ENST00000263956 KRTAP10-1P60331 282 aa5.22□□□□□ -1.57
GTF3C3-201ENST00000263956 LINC00643Q86TS7 51 aa5.22□□□□□ -1.57
GTF3C3-201ENST00000263956 C3orf22Q8N5N4 141 aa5.22□□□□□ -1.57
GTF3C3-201ENST00000263956 A0A087WSZ3 146 aa5.21□□□□□ -1.57
GTF3C3-201ENST00000263956 TENM3Q9P273 2699 aa5.21□□□□□ -1.57
GTF3C3-201ENST00000263956 J3QL48 77 aa5.2□□□□□ -1.58
GTF3C3-201ENST00000263956 ATP5EP2Q5VTU8 51 aa5.19□□□□□ -1.58
GTF3C3-201ENST00000263956 SSBP3-AS1Q7Z2R9 100 aa5.18□□□□□ -1.58
GTF3C3-201ENST00000263956 SPRR4Q96PI1 79 aa5.17□□□□□ -1.58
GTF3C3-201ENST00000263956 J3KT08 172 aa5.16□□□□□ -1.58
GTF3C3-201ENST00000263956 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
GTF3C3-201ENST00000263956 IGKV4-1P06312 121 aa5.16□□□□□ -1.58
GTF3C3-201ENST00000263956 ANAPC13Q9BS18 74 aa5.16□□□□□ -1.58
GTF3C3-201ENST00000263956 Q8NDZ9 215 aa5.16□□□□□ -1.58
GTF3C3-201ENST00000263956 Q8N377 158 aa5.15□□□□□ -1.58
GTF3C3-201ENST00000263956 A0A1B0GW54 56 aa5.15□□□□□ -1.58
GTF3C3-201ENST00000263956 FAM30AQ9NZY2 134 aa5.15□□□□□ -1.58
GTF3C3-201ENST00000263956 FAM240AA0A1B0GVK7 77 aa5.15□□□□□ -1.59
GTF3C3-201ENST00000263956 SPAG11AQ6PDA7 123 aa5.15□□□□□ -1.59
GTF3C3-201ENST00000263956 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
GTF3C3-201ENST00000263956 PANO1I0J062 215 aa5.14□□□□□ -1.59
GTF3C3-201ENST00000263956 SPRR1AP35321 89 aa5.14□□□□□ -1.59
GTF3C3-201ENST00000263956 LINC00304Q8N9R0 145 aa5.14□□□□□ -1.59
GTF3C3-201ENST00000263956 SMCPP49901 116 aaPredicted RBP5.13□□□□□ -1.59
GTF3C3-201ENST00000263956 LOC110117498A0A087WWA1 95 aa5.12□□□□□ -1.59
GTF3C3-201ENST00000263956 MP68P56378 58 aa5.12□□□□□ -1.59
GTF3C3-201ENST00000263956 SVEP1Q4LDE5 3571 aa5.12□□□□□ -1.59
GTF3C3-201ENST00000263956 PRO0461Q9UI25 63 aa5.12□□□□□ -1.59
GTF3C3-201ENST00000263956 IGHV6-1A0A0B4J1U7 121 aa5.12□□□□□ -1.59
GTF3C3-201ENST00000263956 Q6ZQT0 140 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 WFDC13Q8IUB5 93 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 TRBV7-4A0A0J9YYF1 115 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 DEFB116Q30KQ4 102 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 Q6ZVQ6 151 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 Q5VSD8 79 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 TENM2Q9NT68 2774 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
GTF3C3-201ENST00000263956 IGFL1Q6UW32 110 aa5.1□□□□□ -1.59
GTF3C3-201ENST00000263956 SMIM20Q8N5G0 67 aa5.1□□□□□ -1.59
GTF3C3-201ENST00000263956 LINC00846Q9NV44 126 aa5.1□□□□□ -1.59
GTF3C3-201ENST00000263956 FAM236AA0A1B0GUQ0 79 aa5.09□□□□□ -1.59
GTF3C3-201ENST00000263956 FAM236BA0A1B0GV22 79 aa5.09□□□□□ -1.59
GTF3C3-201ENST00000263956 ATOX1O00244 68 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms