RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 NBEAL1Q6ZS30 2694 aa10.86□□□□□ -0.67
ZNF541-201ENST00000263351 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
ZNF541-201ENST00000263351 HRCT1Q6UXD1 115 aa10.85□□□□□ -0.67
ZNF541-201ENST00000263351 SRRM2Q9UQ35 2752 aaKnown RBP10.85□□□□□ -0.67
ZNF541-201ENST00000263351 FAM168BA1KXE4 195 aa10.84□□□□□ -0.67
ZNF541-201ENST00000263351 Q5XG85 94 aa10.84□□□□□ -0.67
ZNF541-201ENST00000263351 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
ZNF541-201ENST00000263351 RPS28P62857 69 aaKnown RBP10.84□□□□□ -0.67
ZNF541-201ENST00000263351 LINC00528Q8N1L1 170 aa10.84□□□□□ -0.67
ZNF541-201ENST00000263351 CASC10Q5T4H9 136 aa10.83□□□□□ -0.68
ZNF541-201ENST00000263351 NDUFC2-KCTD14E9PQ53 114 aa10.81□□□□□ -0.68
ZNF541-201ENST00000263351 TRAV7A0A075B6U4 112 aa10.81□□□□□ -0.68
ZNF541-201ENST00000263351 F8WEM9 126 aa10.8□□□□□ -0.68
ZNF541-201ENST00000263351 M0R378 163 aa10.8□□□□□ -0.68
ZNF541-201ENST00000263351 FAM236DA0A1B0GTK5 79 aa10.8□□□□□ -0.68
ZNF541-201ENST00000263351 FAM236CP0DP71 79 aa10.8□□□□□ -0.68
ZNF541-201ENST00000263351 EGFEM1PQ0D2K5 195 aa10.79□□□□□ -0.68
ZNF541-201ENST00000263351 C1orf43Q9BWL3 253 aa10.78□□□□□ -0.68
ZNF541-201ENST00000263351 A0A0G2JQZ4 141 aa10.78□□□□□ -0.68
ZNF541-201ENST00000263351 A0A1W2PNN7 141 aa10.78□□□□□ -0.68
ZNF541-201ENST00000263351 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.68
ZNF541-201ENST00000263351 CXCL6P80162 114 aa10.77□□□□□ -0.69
ZNF541-201ENST00000263351 ST20-AS1Q8NBB2 130 aa10.77□□□□□ -0.69
ZNF541-201ENST00000263351 C7orf33Q8WU49 177 aa10.77□□□□□ -0.69
ZNF541-201ENST00000263351 Q8N377 158 aa10.75□□□□□ -0.69
ZNF541-201ENST00000263351 TRBV7-6A0A0J9YX20 115 aa10.75□□□□□ -0.69
ZNF541-201ENST00000263351 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
ZNF541-201ENST00000263351 TENM2Q9NT68 2774 aa10.74□□□□□ -0.69
ZNF541-201ENST00000263351 IGKV4-1P06312 121 aa10.73□□□□□ -0.69
ZNF541-201ENST00000263351 DNAH1Q9P2D7 4330 aa10.73□□□□□ -0.69
ZNF541-201ENST00000263351 NREPQ16612 68 aa10.73□□□□□ -0.69
ZNF541-201ENST00000263351 PDE6GP18545 87 aa10.72□□□□□ -0.69
ZNF541-201ENST00000263351 C5orf47Q569G3 176 aa10.72□□□□□ -0.69
ZNF541-201ENST00000263351 DEFB131BA0A096LNP1 70 aa10.72□□□□□ -0.69
ZNF541-201ENST00000263351 KLKP1Q107X0 134 aa10.72□□□□□ -0.69
ZNF541-201ENST00000263351 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
ZNF541-201ENST00000263351 NKAPP1Q8N9T2 125 aa10.72□□□□□ -0.69
ZNF541-201ENST00000263351 Q9BRP9 147 aa10.72□□□□□ -0.69
ZNF541-201ENST00000263351 LINC00474Q9P2X8 69 aa10.71□□□□□ -0.69
ZNF541-201ENST00000263351 ERC2-IT1O76042 136 aa10.7□□□□□ -0.7
ZNF541-201ENST00000263351 COL7A1Q02388 2944 aa10.69□□□□□ -0.7
ZNF541-201ENST00000263351 A0A1W2PNM2 257 aa10.67□□□□□ -0.7
ZNF541-201ENST00000263351 TMEM254Q8TBM7 123 aa10.66□□□□□ -0.7
ZNF541-201ENST00000263351 KCNQ1DNQ9H478 68 aa10.66□□□□□ -0.7
ZNF541-201ENST00000263351 STAB2Q8WWQ8 2551 aa10.66□□□□□ -0.7
ZNF541-201ENST00000263351 DNAH9Q9NYC9 4486 aa10.66□□□□□ -0.7
ZNF541-201ENST00000263351 LINC01556Q5JQF7 62 aa10.66□□□□□ -0.7
ZNF541-201ENST00000263351 FP248Q71RG6 208 aaPredicted RBP10.66□□□□□ -0.7
ZNF541-201ENST00000263351 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
ZNF541-201ENST00000263351 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.7
ZNF541-201ENST00000263351 FAM229BQ4G0N7 80 aa10.65□□□□□ -0.71
ZNF541-201ENST00000263351 HIGD2AQ9BW72 106 aa10.65□□□□□ -0.71
ZNF541-201ENST00000263351 HUWE1Q7Z6Z7 4374 aaKnown RBP10.64□□□□□ -0.71
ZNF541-201ENST00000263351 MGAM2Q2M2H8 2515 aa10.64□□□□□ -0.71
ZNF541-201ENST00000263351 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
ZNF541-201ENST00000263351 SMIM29Q86T20 159 aa10.63□□□□□ -0.71
ZNF541-201ENST00000263351 WIPF1O43516 503 aa10.63□□□□□ -0.71
ZNF541-201ENST00000263351 DEFB116Q30KQ4 102 aa10.63□□□□□ -0.71
ZNF541-201ENST00000263351 SERP1Q9Y6X1 66 aa10.62□□□□□ -0.71
ZNF541-201ENST00000263351 OCR1Q9BZK8 76 aa10.62□□□□□ -0.71
ZNF541-201ENST00000263351 LINC00588Q9Y4M8 146 aa10.62□□□□□ -0.71
ZNF541-201ENST00000263351 Q6ZRX8 168 aa10.61□□□□□ -0.71
ZNF541-201ENST00000263351 EPM2AB3EWF7 344 aa10.61□□□□□ -0.71
ZNF541-201ENST00000263351 H3BNG1 76 aa10.61□□□□□ -0.71
ZNF541-201ENST00000263351 H3BQ85 93 aa10.61□□□□□ -0.71
ZNF541-201ENST00000263351 MRAPQ8TCY5 172 aa10.61□□□□□ -0.71
ZNF541-201ENST00000263351 KRTAP4-16G5E9R7 235 aaPredicted RBP10.6□□□□□ -0.71
ZNF541-201ENST00000263351 BCE1O60756 84 aa10.59□□□□□ -0.71
ZNF541-201ENST00000263351 C1orf137Q5JT78 98 aa10.59□□□□□ -0.71
ZNF541-201ENST00000263351 DNAH7Q8WXX0 4024 aa10.59□□□□□ -0.71
ZNF541-201ENST00000263351 IGLV1-50A0A075B6I6 118 aa10.59□□□□□ -0.71
ZNF541-201ENST00000263351 ETDCA0A1B0GVM5 59 aa10.58□□□□□ -0.72
ZNF541-201ENST00000263351 LINC00336Q6ZUF6 198 aa10.58□□□□□ -0.72
ZNF541-201ENST00000263351 IGLV5-48A0A075B6I7 105 aa10.58□□□□□ -0.72
ZNF541-201ENST00000263351 UBE2BP63146 152 aa10.57□□□□□ -0.72
ZNF541-201ENST00000263351 KRTAP24-1Q3LI83 254 aa10.56□□□□□ -0.72
ZNF541-201ENST00000263351 K7EQZ3 153 aa10.55□□□□□ -0.72
ZNF541-201ENST00000263351 DNAH10OSP0CZ25 163 aa10.55□□□□□ -0.72
ZNF541-201ENST00000263351 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
ZNF541-201ENST00000263351 LRCOL1A6NCL2 159 aa10.55□□□□□ -0.72
ZNF541-201ENST00000263351 MPLKIPQ8TAP9 179 aa10.55□□□□□ -0.72
ZNF541-201ENST00000263351 A0A0U1RQV1 116 aa10.54□□□□□ -0.72
ZNF541-201ENST00000263351 TNP2Q05952 138 aa10.54□□□□□ -0.72
ZNF541-201ENST00000263351 PRLHP81277 87 aa10.54□□□□□ -0.72
ZNF541-201ENST00000263351 PRYO14603 147 aa10.53□□□□□ -0.72
ZNF541-201ENST00000263351 DSCR10P59022 87 aa10.53□□□□□ -0.72
ZNF541-201ENST00000263351 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.73
ZNF541-201ENST00000263351 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
ZNF541-201ENST00000263351 PRR4Q16378 134 aa10.51□□□□□ -0.73
ZNF541-201ENST00000263351 SPRR1AP35321 89 aa10.5□□□□□ -0.73
ZNF541-201ENST00000263351 Q8NBF4 154 aa10.5□□□□□ -0.73
ZNF541-201ENST00000263351 KRTAP1-5Q9BYS1 174 aa10.49□□□□□ -0.73
ZNF541-201ENST00000263351 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
ZNF541-201ENST00000263351 LINC00476Q8WZB0 136 aa10.48□□□□□ -0.73
ZNF541-201ENST00000263351 TLX1NBP0CAT3 122 aa10.47□□□□□ -0.73
ZNF541-201ENST00000263351 KRTAP11-1Q8IUC1 163 aa10.47□□□□□ -0.73
ZNF541-201ENST00000263351 RPL37AP61513 92 aaKnown RBP10.47□□□□□ -0.73
ZNF541-201ENST00000263351 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.46□□□□□ -0.74
ZNF541-201ENST00000263351 A0A096LNI7 61 aa10.46□□□□□ -0.74
ZNF541-201ENST00000263351 SMIM26A0A096LP01 95 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms