RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 HSPG2P98160 4391 aa15.24■□□□□ 0.03
SCN1B-201ENST00000262631 C7orf33Q8WU49 177 aa15.23■□□□□ 0.03
SCN1B-201ENST00000262631 A4D1N5 150 aa15.22■□□□□ 0.03
SCN1B-201ENST00000262631 LINC00167Q96N53 147 aa15.22■□□□□ 0.03
SCN1B-201ENST00000262631 KRTAP11-1Q8IUC1 163 aa15.22■□□□□ 0.03
SCN1B-201ENST00000262631 PPDPFLQ8WWR9 84 aa15.21■□□□□ 0.03
SCN1B-201ENST00000262631 M0R378 163 aa15.2■□□□□ 0.02
SCN1B-201ENST00000262631 SMR3BP02814 79 aaPredicted RBP15.2■□□□□ 0.02
SCN1B-201ENST00000262631 RPL37AP8A6NKH3 93 aa15.19■□□□□ 0.02
SCN1B-201ENST00000262631 TSPAN13O95857 204 aa15.19■□□□□ 0.02
SCN1B-201ENST00000262631 FAT1Q14517 4588 aa15.18■□□□□ 0.02
SCN1B-201ENST00000262631 TRBV10-2A0A0K0K1G8 114 aa15.18■□□□□ 0.02
SCN1B-201ENST00000262631 TEN1Q86WV5 123 aa15.18■□□□□ 0.02
SCN1B-201ENST00000262631 LINC00337Q8N6G1 96 aa15.17■□□□□ 0.02
SCN1B-201ENST00000262631 UBE2BP63146 152 aa15.16■□□□□ 0.02
SCN1B-201ENST00000262631 TRBV10-3A0A0K0K1G6 114 aa15.15■□□□□ 0.02
SCN1B-201ENST00000262631 PSMB2P49721 201 aa15.15■□□□□ 0.02
SCN1B-201ENST00000262631 SMCPP49901 116 aaPredicted RBP15.15■□□□□ 0.02
SCN1B-201ENST00000262631 IGLV1-50A0A075B6I6 118 aa15.14■□□□□ 0.01
SCN1B-201ENST00000262631 CDIP1Q9H305 208 aa15.14■□□□□ 0.01
SCN1B-201ENST00000262631 IGLV6-57P01721 117 aa15.12■□□□□ 0.01
SCN1B-201ENST00000262631 CFC1BP0CG36 223 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 CFC1P0CG37 223 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 S100A7L2Q5SY68 101 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 LINC00528Q8N1L1 170 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 VPS13BQ7Z7G8 4022 aa15.11■□□□□ 0.01
SCN1B-201ENST00000262631 OR13C6PQ8NH95 151 aa15.1■□□□□ 0.01
SCN1B-201ENST00000262631 KRTAP17-1Q9BYP8 105 aa15.1■□□□□ 0.01
SCN1B-201ENST00000262631 PRO1854Q9UHT4 67 aa15.09■□□□□ 0.01
SCN1B-201ENST00000262631 PSORS1C2Q9UIG4 136 aa15.09■□□□□ 0.01
SCN1B-201ENST00000262631 SVIPQ8NHG7 77 aa15.07■□□□□ 0
SCN1B-201ENST00000262631 TMEM126AQ9H061 195 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 TRAV13-2A0A0B4J235 113 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 A0A0B4J2C4 111 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 TCL1BO95988 128 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 LINC01600Q96MT4 127 aa15.06■□□□□ 0
SCN1B-201ENST00000262631 KCNQ1DNQ9H478 68 aa15.05■□□□□ -0
SCN1B-201ENST00000262631 SCGB1C2P0DMR2 95 aa15.02□□□□□ -0.01
SCN1B-201ENST00000262631 REG3GQ6UW15 175 aa15.02□□□□□ -0.01
SCN1B-201ENST00000262631 TRAV23DV6A0A075B6W5 121 aa15.01□□□□□ -0.01
SCN1B-201ENST00000262631 MT-ATP8P03928 68 aa15.01□□□□□ -0.01
SCN1B-201ENST00000262631 RPL13AP40429 203 aaKnown RBP15.01□□□□□ -0.01
SCN1B-201ENST00000262631 PRYO14603 147 aa15□□□□□ -0.01
SCN1B-201ENST00000262631 RPL37AP61513 92 aaKnown RBP15□□□□□ -0.01
SCN1B-201ENST00000262631 C1orf137Q5JT78 98 aa15□□□□□ -0.01
SCN1B-201ENST00000262631 ANKRD29Q8N6D5 301 aa15□□□□□ -0.01
SCN1B-201ENST00000262631 SLC25A20O43772 301 aa14.98□□□□□ -0.01
SCN1B-201ENST00000262631 SPRR1AP35321 89 aa14.98□□□□□ -0.01
SCN1B-201ENST00000262631 KRTAP10-4P60372 401 aaPredicted RBP14.98□□□□□ -0.01
SCN1B-201ENST00000262631 SMIM11BQ8TCY0 68 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 H7C2G1 150 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 ATXN8Q156A1 80 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 Q5VSD8 79 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 Q8N1X5 172 aa14.97□□□□□ -0.01
SCN1B-201ENST00000262631 KRTAP4-16G5E9R7 235 aaPredicted RBP14.96□□□□□ -0.01
SCN1B-201ENST00000262631 FAM229AH3BQW9 127 aa14.96□□□□□ -0.01
SCN1B-201ENST00000262631 ZNF73O43830 326 aaPredicted RBP14.96□□□□□ -0.01
SCN1B-201ENST00000262631 BCE1O60756 84 aa14.96□□□□□ -0.01
SCN1B-201ENST00000262631 HERC2O95714 4834 aa14.95□□□□□ -0.02
SCN1B-201ENST00000262631 SRRM2Q9UQ35 2752 aaKnown RBP14.94□□□□□ -0.02
SCN1B-201ENST00000262631 C6orf99Q4VX62 202 aa14.93□□□□□ -0.02
SCN1B-201ENST00000262631 Q6Q795 121 aa14.93□□□□□ -0.02
SCN1B-201ENST00000262631 C9JAW5 83 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 IGLV7-43P04211 117 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 PRLHP81277 87 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 FAM19A1Q7Z5A9 133 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 ANAPC13Q9BS18 74 aa14.91□□□□□ -0.02
SCN1B-201ENST00000262631 DIRC1Q969H9 104 aa14.9□□□□□ -0.02
SCN1B-201ENST00000262631 ETDCA0A1B0GVM5 59 aa14.89□□□□□ -0.03
SCN1B-201ENST00000262631 PLA2G1BP04054 148 aaKnown RBP14.89□□□□□ -0.03
SCN1B-201ENST00000262631 KRTAP13-1Q8IUC0 172 aa14.89□□□□□ -0.03
SCN1B-201ENST00000262631 B5MCH6 92 aa14.88□□□□□ -0.03
SCN1B-201ENST00000262631 SNCGO76070 127 aa14.87□□□□□ -0.03
SCN1B-201ENST00000262631 RPL28P46779 137 aaKnown RBP14.87□□□□□ -0.03
SCN1B-201ENST00000262631 UBE2AP49459 152 aa14.87□□□□□ -0.03
SCN1B-201ENST00000262631 Q1RN00 199 aa14.87□□□□□ -0.03
SCN1B-201ENST00000262631 H3BT86 120 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 Q6ZRX8 168 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 ZNF861PO60384 105 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 KRTAP4-5Q9BYR2 181 aa14.84□□□□□ -0.03
SCN1B-201ENST00000262631 COX6CP09669 75 aa14.83□□□□□ -0.04
SCN1B-201ENST00000262631 ELOF1P60002 83 aaKnown RBP14.83□□□□□ -0.04
SCN1B-201ENST00000262631 Q9BRP9 147 aa14.82□□□□□ -0.04
SCN1B-201ENST00000262631 COX7BP24311 80 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 FAM240AA0A1B0GVK7 77 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 H0Y9J4 135 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 TRIAP1O43715 76 aa14.81□□□□□ -0.04
SCN1B-201ENST00000262631 TRBV7-6A0A0J9YX20 115 aa14.8□□□□□ -0.04
SCN1B-201ENST00000262631 HIGD2AQ9BW72 106 aa14.8□□□□□ -0.04
SCN1B-201ENST00000262631 SMCR5Q8TEV8 140 aa14.78□□□□□ -0.04
SCN1B-201ENST00000262631 NDUFV3P56181 108 aaKnown RBP14.77□□□□□ -0.04
SCN1B-201ENST00000262631 ERC2-IT1O76042 136 aa14.75□□□□□ -0.05
SCN1B-201ENST00000262631 SPINK6Q6UWN8 80 aa14.74□□□□□ -0.05
SCN1B-201ENST00000262631 LST1O00453 97 aa14.71□□□□□ -0.05
SCN1B-201ENST00000262631 PKHD1L1Q86WI1 4243 aa14.71□□□□□ -0.05
SCN1B-201ENST00000262631 LINC00575Q6W349 94 aa14.71□□□□□ -0.06
SCN1B-201ENST00000262631 FAM218AQ96MZ4 157 aa14.71□□□□□ -0.06
SCN1B-201ENST00000262631 DHRS4-AS1Q9P1J3 65 aa14.7□□□□□ -0.06
SCN1B-201ENST00000262631 ABCA13Q86UQ4 5058 aa14.69□□□□□ -0.06
SCN1B-201ENST00000262631 TEX49A0A1B0GTD5 131 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms