RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TLX1NBP0CAT3 122 aa5.58□□□□□ -1.52
PTPN3-201ENST00000262539 A0A087WYN8 130 aa5.57□□□□□ -1.52
PTPN3-201ENST00000262539 CRYGAP11844 174 aa5.57□□□□□ -1.52
PTPN3-201ENST00000262539 KALRNO60229 2985 aa5.57□□□□□ -1.52
PTPN3-201ENST00000262539 HIVEP1P15822 2718 aa5.57□□□□□ -1.52
PTPN3-201ENST00000262539 TEX15Q9BXT5 2789 aa5.57□□□□□ -1.52
PTPN3-201ENST00000262539 TEP1Q99973 2627 aaKnown RBP5.57□□□□□ -1.52
PTPN3-201ENST00000262539 Q6ZRP5 223 aa5.56□□□□□ -1.52
PTPN3-201ENST00000262539 PLA2G2DQ9UNK4 145 aa5.56□□□□□ -1.52
PTPN3-201ENST00000262539 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
PTPN3-201ENST00000262539 BAHCC1Q9P281 2608 aa5.56□□□□□ -1.52
PTPN3-201ENST00000262539 Q96NJ1 140 aa5.55□□□□□ -1.52
PTPN3-201ENST00000262539 NBDYA0A0U1RRE5 68 aa5.55□□□□□ -1.52
PTPN3-201ENST00000262539 SERTAD4-AS1Q5TG53 156 aa5.55□□□□□ -1.52
PTPN3-201ENST00000262539 K7EIL1 84 aa5.55□□□□□ -1.52
PTPN3-201ENST00000262539 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
PTPN3-201ENST00000262539 NOTCH1P46531 2555 aa5.54□□□□□ -1.52
PTPN3-201ENST00000262539 DNAH14Q0VDD8 3507 aa5.53□□□□□ -1.52
PTPN3-201ENST00000262539 LINC00313P59037 77 aa5.53□□□□□ -1.52
PTPN3-201ENST00000262539 SOSTDC1Q6X4U4 206 aa5.53□□□□□ -1.52
PTPN3-201ENST00000262539 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
PTPN3-201ENST00000262539 MYO15AQ9UKN7 3530 aa5.52□□□□□ -1.53
PTPN3-201ENST00000262539 TRBV7-7A0A0K0K1E9 115 aa5.52□□□□□ -1.53
PTPN3-201ENST00000262539 BCE1O60756 84 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 ATMQ13315 3056 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 SPEGQ15772 3267 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 IGLV5-37A0A075B6J1 123 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 ACYP2P14621 99 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 SZT2Q5T011 3432 aa5.51□□□□□ -1.53
PTPN3-201ENST00000262539 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
PTPN3-201ENST00000262539 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
PTPN3-201ENST00000262539 C6orf48Q9UBA6 75 aa5.5□□□□□ -1.53
PTPN3-201ENST00000262539 Q8NBF4 154 aa5.5□□□□□ -1.53
PTPN3-201ENST00000262539 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
PTPN3-201ENST00000262539 A0A1B0GU69 56 aa5.49□□□□□ -1.53
PTPN3-201ENST00000262539 LINC00588Q9Y4M8 146 aa5.49□□□□□ -1.53
PTPN3-201ENST00000262539 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
PTPN3-201ENST00000262539 DMXL2Q8TDJ6 3036 aa5.49□□□□□ -1.53
PTPN3-201ENST00000262539 HRNRQ86YZ3 2850 aaPredicted RBP5.49□□□□□ -1.53
PTPN3-201ENST00000262539 PSPHP1O15172 72 aa5.49□□□□□ -1.53
PTPN3-201ENST00000262539 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
PTPN3-201ENST00000262539 VPREB1P12018 145 aa5.48□□□□□ -1.53
PTPN3-201ENST00000262539 SMR3BP02814 79 aaPredicted RBP5.48□□□□□ -1.53
PTPN3-201ENST00000262539 COX7CP15954 63 aa5.47□□□□□ -1.53
PTPN3-201ENST00000262539 KCNQ1DNQ9H478 68 aa5.47□□□□□ -1.53
PTPN3-201ENST00000262539 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
PTPN3-201ENST00000262539 ELOF1P60002 83 aaKnown RBP5.47□□□□□ -1.53
PTPN3-201ENST00000262539 PMAIP1Q13794 54 aa5.47□□□□□ -1.53
PTPN3-201ENST00000262539 FRYLO94915 3013 aa5.46□□□□□ -1.53
PTPN3-201ENST00000262539 EPM2AB3EWF7 344 aa5.46□□□□□ -1.53
PTPN3-201ENST00000262539 UTP20O75691 2785 aaKnown RBP5.46□□□□□ -1.53
PTPN3-201ENST00000262539 A0A087WVE0 104 aa5.46□□□□□ -1.53
PTPN3-201ENST00000262539 IGLV8-61A0A075B6I0 122 aa5.46□□□□□ -1.54
PTPN3-201ENST00000262539 Q8N3U1 123 aa5.46□□□□□ -1.54
PTPN3-201ENST00000262539 LOC110117498A0A087WWA1 95 aa5.46□□□□□ -1.54
PTPN3-201ENST00000262539 SMCPP49901 116 aaPredicted RBP5.45□□□□□ -1.54
PTPN3-201ENST00000262539 MAP1AP78559 2803 aaPredicted RBP5.45□□□□□ -1.54
PTPN3-201ENST00000262539 C1orf195Q5TG92 126 aa5.45□□□□□ -1.54
PTPN3-201ENST00000262539 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
PTPN3-201ENST00000262539 STAB2Q8WWQ8 2551 aa5.44□□□□□ -1.54
PTPN3-201ENST00000262539 APLNQ9ULZ1 77 aa5.44□□□□□ -1.54
PTPN3-201ENST00000262539 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 ZANQ9Y493 2812 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 C15orf56Q8N910 161 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 C9orf163Q8N9P6 203 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 SPTBN5Q9NRC6 3674 aaKnown RBP5.43□□□□□ -1.54
PTPN3-201ENST00000262539 LINC00528Q8N1L1 170 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 MUC3AQ02505 3323 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 COL12A1Q99715 3063 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 TP53AIP1Q9HCN2 124 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
PTPN3-201ENST00000262539 LAMA1P25391 3075 aa5.42□□□□□ -1.54
PTPN3-201ENST00000262539 SMIM26A0A096LP01 95 aa5.42□□□□□ -1.54
PTPN3-201ENST00000262539 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
PTPN3-201ENST00000262539 FRYQ5TBA9 3013 aa5.41□□□□□ -1.54
PTPN3-201ENST00000262539 Q6ZRX8 168 aa5.41□□□□□ -1.54
PTPN3-201ENST00000262539 SPAG11AQ6PDA7 123 aa5.41□□□□□ -1.54
PTPN3-201ENST00000262539 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
PTPN3-201ENST00000262539 ADGRG4Q8IZF6 3080 aa5.41□□□□□ -1.54
PTPN3-201ENST00000262539 OBSCN-AS1Q96MR7 158 aa5.4□□□□□ -1.54
PTPN3-201ENST00000262539 KRTAP26-1Q6PEX3 210 aa5.4□□□□□ -1.55
PTPN3-201ENST00000262539 LINC00476Q8WZB0 136 aa5.4□□□□□ -1.55
PTPN3-201ENST00000262539 RBM12B-AS1Q9P1G2 102 aa5.4□□□□□ -1.55
PTPN3-201ENST00000262539 WDFY3Q8IZQ1 3526 aa5.4□□□□□ -1.55
PTPN3-201ENST00000262539 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
PTPN3-201ENST00000262539 DMXL1Q9Y485 3027 aa5.39□□□□□ -1.55
PTPN3-201ENST00000262539 M0R2T5 61 aa5.39□□□□□ -1.55
PTPN3-201ENST00000262539 ST20-AS1Q8NBB2 130 aa5.39□□□□□ -1.55
PTPN3-201ENST00000262539 CXCL6P80162 114 aa5.38□□□□□ -1.55
PTPN3-201ENST00000262539 TRAV22A0A0B4J277 110 aa5.38□□□□□ -1.55
PTPN3-201ENST00000262539 LINC00336Q6ZUF6 198 aa5.38□□□□□ -1.55
PTPN3-201ENST00000262539 IGLV1-50A0A075B6I6 118 aa5.37□□□□□ -1.55
PTPN3-201ENST00000262539 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
PTPN3-201ENST00000262539 SPRR1AP35321 89 aa5.37□□□□□ -1.55
PTPN3-201ENST00000262539 BOD1L1Q8NFC6 3051 aa5.37□□□□□ -1.55
PTPN3-201ENST00000262539 ZZEF1O43149 2961 aa5.36□□□□□ -1.55
PTPN3-201ENST00000262539 DSCR10P59022 87 aa5.36□□□□□ -1.55
PTPN3-201ENST00000262539 LINC01554Q52M75 96 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms