RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 HCG22E2RYF7 251 aa11.02□□□□□ -0.65
SREBF1-201ENST00000261646 RETNQ9HD89 108 aa11.02□□□□□ -0.65
SREBF1-201ENST00000261646 UTP20O75691 2785 aaKnown RBP11.01□□□□□ -0.65
SREBF1-201ENST00000261646 Q6ZTC4 211 aa11□□□□□ -0.65
SREBF1-201ENST00000261646 M0R2N4 97 aa10.99□□□□□ -0.65
SREBF1-201ENST00000261646 IGLV6-57P01721 117 aa10.99□□□□□ -0.65
SREBF1-201ENST00000261646 CASC2Q6XLA1 102 aa10.99□□□□□ -0.65
SREBF1-201ENST00000261646 NF1P21359 2839 aa10.98□□□□□ -0.65
SREBF1-201ENST00000261646 C7orf33Q8WU49 177 aa10.98□□□□□ -0.65
SREBF1-201ENST00000261646 H0Y9P7 68 aa10.98□□□□□ -0.65
SREBF1-201ENST00000261646 PCOTHQ58A44 107 aa10.98□□□□□ -0.65
SREBF1-201ENST00000261646 X6R8D5 127 aa10.98□□□□□ -0.65
SREBF1-201ENST00000261646 SETXQ7Z333 2677 aaKnown RBP10.97□□□□□ -0.65
SREBF1-201ENST00000261646 OBSCN-AS1Q96MR7 158 aa10.97□□□□□ -0.65
SREBF1-201ENST00000261646 UNC79Q9P2D8 2635 aa10.97□□□□□ -0.65
SREBF1-201ENST00000261646 NOTCH1P46531 2555 aa10.96□□□□□ -0.66
SREBF1-201ENST00000261646 FBN2P35556 2912 aa10.95□□□□□ -0.66
SREBF1-201ENST00000261646 REG3GQ6UW15 175 aa10.95□□□□□ -0.66
SREBF1-201ENST00000261646 SVEP1Q4LDE5 3571 aa10.94□□□□□ -0.66
SREBF1-201ENST00000261646 FSHBP01225 129 aa10.94□□□□□ -0.66
SREBF1-201ENST00000261646 PLAC8L1A1L4L8 177 aa10.93□□□□□ -0.66
SREBF1-201ENST00000261646 IL17DQ8TAD2 202 aa10.93□□□□□ -0.66
SREBF1-201ENST00000261646 A0A096LNT2 108 aa10.93□□□□□ -0.66
SREBF1-201ENST00000261646 GIG44P09565 113 aaPredicted RBP10.92□□□□□ -0.66
SREBF1-201ENST00000261646 SPINK6Q6UWN8 80 aa10.92□□□□□ -0.66
SREBF1-201ENST00000261646 C16orf95Q9H693 158 aa10.92□□□□□ -0.66
SREBF1-201ENST00000261646 hDV103S1A0JD37 113 aa10.91□□□□□ -0.66
SREBF1-201ENST00000261646 Q8NBF4 154 aa10.91□□□□□ -0.66
SREBF1-201ENST00000261646 PRLHP81277 87 aa10.91□□□□□ -0.66
SREBF1-201ENST00000261646 WIPF1O43516 503 aa10.91□□□□□ -0.66
SREBF1-201ENST00000261646 VPREB1P12018 145 aa10.9□□□□□ -0.66
SREBF1-201ENST00000261646 IGLV9-49A0A0B4J1Y8 123 aa10.9□□□□□ -0.66
SREBF1-201ENST00000261646 ERC2-IT1O76042 136 aa10.9□□□□□ -0.67
SREBF1-201ENST00000261646 CSNK1G2-AS1Q8NCQ2 148 aa10.9□□□□□ -0.67
SREBF1-201ENST00000261646 LINC00167Q96N53 147 aa10.9□□□□□ -0.67
SREBF1-201ENST00000261646 Q9BRP9 147 aa10.9□□□□□ -0.67
SREBF1-201ENST00000261646 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
SREBF1-201ENST00000261646 C22orf24Q9Y442 160 aa10.89□□□□□ -0.67
SREBF1-201ENST00000261646 ITPR2Q14571 2701 aa10.89□□□□□ -0.67
SREBF1-201ENST00000261646 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
SREBF1-201ENST00000261646 NBEAL1Q6ZS30 2694 aa10.88□□□□□ -0.67
SREBF1-201ENST00000261646 ST20-AS1Q8NBB2 130 aa10.88□□□□□ -0.67
SREBF1-201ENST00000261646 CELSR2Q9HCU4 2923 aa10.88□□□□□ -0.67
SREBF1-201ENST00000261646 C14orf177Q52M58 125 aa10.87□□□□□ -0.67
SREBF1-201ENST00000261646 Q5XG85 94 aa10.87□□□□□ -0.67
SREBF1-201ENST00000261646 CUBNO60494 3623 aa10.86□□□□□ -0.67
SREBF1-201ENST00000261646 A8MUN3 132 aa10.86□□□□□ -0.67
SREBF1-201ENST00000261646 LIMD2Q9BT23 127 aa10.86□□□□□ -0.67
SREBF1-201ENST00000261646 CELSR1Q9NYQ6 3014 aa10.86□□□□□ -0.67
SREBF1-201ENST00000261646 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
SREBF1-201ENST00000261646 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
SREBF1-201ENST00000261646 Q6ZRP5 223 aa10.84□□□□□ -0.67
SREBF1-201ENST00000261646 Q6ZRX8 168 aa10.84□□□□□ -0.67
SREBF1-201ENST00000261646 K7EQZ3 153 aa10.83□□□□□ -0.68
SREBF1-201ENST00000261646 OXTP01178 125 aa10.82□□□□□ -0.68
SREBF1-201ENST00000261646 A0A1B0GW54 56 aa10.82□□□□□ -0.68
SREBF1-201ENST00000261646 F8WDY8 70 aa10.81□□□□□ -0.68
SREBF1-201ENST00000261646 LINC00476Q8WZB0 136 aa10.81□□□□□ -0.68
SREBF1-201ENST00000261646 IGHV6-1A0A0B4J1U7 121 aa10.8□□□□□ -0.68
SREBF1-201ENST00000261646 C19orf73Q9NVV2 129 aa10.79□□□□□ -0.68
SREBF1-201ENST00000261646 RPL37AP61513 92 aaKnown RBP10.79□□□□□ -0.68
SREBF1-201ENST00000261646 CR1P17927 2039 aa10.79□□□□□ -0.68
SREBF1-201ENST00000261646 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
SREBF1-201ENST00000261646 STAB1Q9NY15 2570 aa10.78□□□□□ -0.68
SREBF1-201ENST00000261646 Q8N377 158 aa10.76□□□□□ -0.69
SREBF1-201ENST00000261646 Q8NAQ8 132 aa10.76□□□□□ -0.69
SREBF1-201ENST00000261646 LINC01556Q5JQF7 62 aa10.76□□□□□ -0.69
SREBF1-201ENST00000261646 SPAG11AQ6PDA7 123 aa10.75□□□□□ -0.69
SREBF1-201ENST00000261646 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
SREBF1-201ENST00000261646 FP248Q71RG6 208 aaPredicted RBP10.73□□□□□ -0.69
SREBF1-201ENST00000261646 PRR34Q9NV39 138 aa10.73□□□□□ -0.69
SREBF1-201ENST00000261646 TRAV22A0A0B4J277 110 aa10.73□□□□□ -0.69
SREBF1-201ENST00000261646 MXRA5Q9NR99 2828 aa10.72□□□□□ -0.69
SREBF1-201ENST00000261646 FAM168BA1KXE4 195 aa10.72□□□□□ -0.69
SREBF1-201ENST00000261646 A0A0G2JQZ4 141 aa10.71□□□□□ -0.69
SREBF1-201ENST00000261646 A0A1W2PNN7 141 aa10.71□□□□□ -0.69
SREBF1-201ENST00000261646 KCNQ1DNQ9H478 68 aa10.71□□□□□ -0.69
SREBF1-201ENST00000261646 SPENQ96T58 3664 aaKnown RBP10.71□□□□□ -0.7
SREBF1-201ENST00000261646 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
SREBF1-201ENST00000261646 KRTAP1-3Q8IUG1 177 aa10.69□□□□□ -0.7
SREBF1-201ENST00000261646 LINC00612Q8N6U2 182 aa10.69□□□□□ -0.7
SREBF1-201ENST00000261646 Q8NDZ9 215 aa10.69□□□□□ -0.7
SREBF1-201ENST00000261646 APCP25054 2843 aa10.68□□□□□ -0.7
SREBF1-201ENST00000261646 KRTAP10-3P60369 221 aa10.68□□□□□ -0.7
SREBF1-201ENST00000261646 A0A1W2PNM2 257 aa10.67□□□□□ -0.7
SREBF1-201ENST00000261646 C4orf48Q5BLP8 95 aa10.66□□□□□ -0.7
SREBF1-201ENST00000261646 H3BPC8 53 aa10.65□□□□□ -0.7
SREBF1-201ENST00000261646 HIVEP1P15822 2718 aa10.65□□□□□ -0.71
SREBF1-201ENST00000261646 C15orf56Q8N910 161 aa10.65□□□□□ -0.71
SREBF1-201ENST00000261646 ZNF706Q9Y5V0 76 aaPredicted RBP10.64□□□□□ -0.71
SREBF1-201ENST00000261646 EPM2AB3EWF7 344 aa10.64□□□□□ -0.71
SREBF1-201ENST00000261646 FAM229BQ4G0N7 80 aa10.64□□□□□ -0.71
SREBF1-201ENST00000261646 NSD1Q96L73 2696 aaPredicted RBP10.63□□□□□ -0.71
SREBF1-201ENST00000261646 IGLV1-50A0A075B6I6 118 aa10.62□□□□□ -0.71
SREBF1-201ENST00000261646 H3BNG1 76 aa10.62□□□□□ -0.71
SREBF1-201ENST00000261646 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
SREBF1-201ENST00000261646 IGFL1Q6UW32 110 aa10.6□□□□□ -0.71
SREBF1-201ENST00000261646 COA5Q86WW8 74 aa10.6□□□□□ -0.71
SREBF1-201ENST00000261646 CIRBP-AS1Q8TBR5 109 aa10.59□□□□□ -0.71
SREBF1-201ENST00000261646 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms