RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 C22orf24Q9Y442 160 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 CR1P17927 2039 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 HIVEP1P15822 2718 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 LINC01547P58512 204 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-202ENST00000261517 PRR34Q9NV39 138 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 C19orf73Q9NVV2 129 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 ESRGQ1W209 222 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 Q6ZVQ6 151 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 FAM229AH3BQW9 127 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 ACYP2P14621 99 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 A0A096LNT2 108 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 Q6ZRU5 148 aa2.97□□□□□ -1.93
VPS13C-202ENST00000261517 Q8N3U1 123 aa2.96□□□□□ -1.93
VPS13C-202ENST00000261517 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 KCNQ1DNQ9H478 68 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 H0Y9P7 68 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 CSNK1G2-AS1Q8NCQ2 148 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 A0A087WYN8 130 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 C9orf116Q5BN46 136 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-202ENST00000261517 IGLV9-49A0A0B4J1Y8 123 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 TMEM254Q8TBM7 123 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 Q6ZSN1 163 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 XGP55808 180 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 SSBP3-AS1Q7Z2R9 100 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 C6orf48Q9UBA6 75 aa2.96□□□□□ -1.94
VPS13C-202ENST00000261517 RELNP78509 3460 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 C1orf195Q5TG92 126 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 MDFIQ99750 246 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 GAS8-AS1O95177 125 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 TRAV22A0A0B4J277 110 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 A6NED7 52 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 HRNRQ86YZ3 2850 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-202ENST00000261517 FBN2P35556 2912 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 SMCR5Q8TEV8 140 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 CIRBP-AS1Q8TBR5 109 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 Q6ZQT0 140 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 WFDC13Q8IUB5 93 aa2.95□□□□□ -1.94
VPS13C-202ENST00000261517 NBEAL2Q6ZNJ1 2754 aa2.94□□□□□ -1.94
VPS13C-202ENST00000261517 LINC01600Q96MT4 127 aa2.94□□□□□ -1.94
VPS13C-202ENST00000261517 IGLV5-37A0A075B6J1 123 aa2.94□□□□□ -1.94
VPS13C-202ENST00000261517 CD164Q04900 197 aa2.94□□□□□ -1.94
VPS13C-202ENST00000261517 CNBPP62633 177 aaKnown RBP2.94□□□□□ -1.94
VPS13C-202ENST00000261517 STAB2Q8WWQ8 2551 aa2.94□□□□□ -1.94
VPS13C-202ENST00000261517 VPREB1P12018 145 aa2.94□□□□□ -1.94
VPS13C-202ENST00000261517 LRCOL1A6NCL2 159 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 A0A087WSZ3 146 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 LINC00208Q96KT6 92 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 SMG1Q96Q15 3661 aaKnown RBP2.93□□□□□ -1.94
VPS13C-202ENST00000261517 IGHV6-1A0A0B4J1U7 121 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 A8MWP4 228 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 TM2D3Q9BRN9 247 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 SPINK6Q6UWN8 80 aa2.93□□□□□ -1.94
VPS13C-202ENST00000261517 C1orf64Q8NEQ6 169 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 RTL8CO15255 209 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 M0R2N4 97 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 PRO0461Q9UI25 63 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 RETNQ9HD89 108 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 SCXQ7RTU7 201 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 LINC00588Q9Y4M8 146 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 ZFHX4Q86UP3 3567 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 KRTAP24-1Q3LI83 254 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 LINC00846Q9NV44 126 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 CYP4F30PQ9H0H9 118 aa2.92□□□□□ -1.94
VPS13C-202ENST00000261517 KIAA0087Q14695 138 aa2.91□□□□□ -1.94
VPS13C-202ENST00000261517 LINC00313P59037 77 aa2.91□□□□□ -1.94
VPS13C-202ENST00000261517 SMR3AQ99954 134 aa2.91□□□□□ -1.94
VPS13C-202ENST00000261517 LITAFQ99732 161 aa2.91□□□□□ -1.94
VPS13C-202ENST00000261517 CDIP1Q9H305 208 aa2.9□□□□□ -1.94
VPS13C-202ENST00000261517 SNURFQ9Y675 71 aa2.9□□□□□ -1.94
VPS13C-202ENST00000261517 A0A096LNI7 61 aa2.9□□□□□ -1.95
VPS13C-202ENST00000261517 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
VPS13C-202ENST00000261517 EPM2AB3EWF7 344 aa2.9□□□□□ -1.95
VPS13C-202ENST00000261517 LINC00528Q8N1L1 170 aa2.9□□□□□ -1.95
VPS13C-202ENST00000261517 SPANXA2-OT1Q8N9U9 137 aa2.9□□□□□ -1.95
VPS13C-202ENST00000261517 IGLV1-50A0A075B6I6 118 aa2.9□□□□□ -1.95
VPS13C-202ENST00000261517 LINC00476Q8WZB0 136 aa2.9□□□□□ -1.95
VPS13C-202ENST00000261517 TYMSOSQ8TAI1 123 aa2.89□□□□□ -1.95
VPS13C-202ENST00000261517 CCDC179H3BU77 68 aa2.89□□□□□ -1.95
VPS13C-202ENST00000261517 ZNF861PO60384 105 aa2.89□□□□□ -1.95
VPS13C-202ENST00000261517 MPLKIPQ8TAP9 179 aa2.89□□□□□ -1.95
VPS13C-202ENST00000261517 C9orf163Q8N9P6 203 aa2.89□□□□□ -1.95
VPS13C-202ENST00000261517 FAM229BQ4G0N7 80 aa2.89□□□□□ -1.95
VPS13C-202ENST00000261517 PRM2P04554 102 aa2.89□□□□□ -1.95
VPS13C-202ENST00000261517 PRLHP81277 87 aa2.88□□□□□ -1.95
VPS13C-202ENST00000261517 CELSR1Q9NYQ6 3014 aa2.88□□□□□ -1.95
VPS13C-202ENST00000261517 A8MUN3 132 aa2.88□□□□□ -1.95
VPS13C-202ENST00000261517 SPINK1P00995 79 aa2.88□□□□□ -1.95
VPS13C-202ENST00000261517 ATP11AUNQ6ZP68 121 aa2.88□□□□□ -1.95
VPS13C-202ENST00000261517 KLKP1Q107X0 134 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 SVIPQ8NHG7 77 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 PRO0628Q9UI54 55 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
VPS13C-202ENST00000261517 HRCT1Q6UXD1 115 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 ZNF575Q86XF7 245 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 SOSTDC1Q6X4U4 206 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 MRPL34Q9BQ48 92 aaKnown RBP2.87□□□□□ -1.95
VPS13C-202ENST00000261517 A0A1B0GU69 56 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 TENM4Q6N022 2769 aa2.87□□□□□ -1.95
VPS13C-202ENST00000261517 C7orf65Q6ZTY9 151 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms