RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 IGLV1-50A0A075B6I6 118 aa12.89□□□□□ -0.35
RTCA-201ENST00000260563 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
RTCA-201ENST00000260563 VPS13BQ7Z7G8 4022 aa12.89□□□□□ -0.35
RTCA-201ENST00000260563 UBE2BP63146 152 aa12.88□□□□□ -0.35
RTCA-201ENST00000260563 TRAV23DV6A0A075B6W5 121 aa12.88□□□□□ -0.35
RTCA-201ENST00000260563 RPL37AP61513 92 aaKnown RBP12.88□□□□□ -0.35
RTCA-201ENST00000260563 SMIM11BQ8TCY0 68 aa12.88□□□□□ -0.35
RTCA-201ENST00000260563 KRTAP17-1Q9BYP8 105 aa12.87□□□□□ -0.35
RTCA-201ENST00000260563 CBY1Q9Y3M2 126 aa12.87□□□□□ -0.35
RTCA-201ENST00000260563 PLA2G1BP04054 148 aaKnown RBP12.86□□□□□ -0.35
RTCA-201ENST00000260563 KCNQ1DNQ9H478 68 aa12.86□□□□□ -0.35
RTCA-201ENST00000260563 RPL28P46779 137 aaKnown RBP12.85□□□□□ -0.35
RTCA-201ENST00000260563 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
RTCA-201ENST00000260563 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
RTCA-201ENST00000260563 PRYO14603 147 aa12.83□□□□□ -0.35
RTCA-201ENST00000260563 PSMB2P49721 201 aa12.83□□□□□ -0.35
RTCA-201ENST00000260563 H3BUT2 72 aa12.83□□□□□ -0.36
RTCA-201ENST00000260563 ZNF73O43830 326 aaPredicted RBP12.82□□□□□ -0.36
RTCA-201ENST00000260563 TRIAP1O43715 76 aa12.81□□□□□ -0.36
RTCA-201ENST00000260563 C6orf99Q4VX62 202 aa12.81□□□□□ -0.36
RTCA-201ENST00000260563 KRTAP11-1Q8IUC1 163 aa12.81□□□□□ -0.36
RTCA-201ENST00000260563 PSORS1C2Q9UIG4 136 aa12.81□□□□□ -0.36
RTCA-201ENST00000260563 DIRC1Q969H9 104 aa12.8□□□□□ -0.36
RTCA-201ENST00000260563 REG3GQ6UW15 175 aa12.79□□□□□ -0.36
RTCA-201ENST00000260563 COX6CP09669 75 aa12.78□□□□□ -0.36
RTCA-201ENST00000260563 SPRR1AP35321 89 aa12.78□□□□□ -0.36
RTCA-201ENST00000260563 KRTAP10-4P60372 401 aaPredicted RBP12.77□□□□□ -0.37
RTCA-201ENST00000260563 C1orf137Q5JT78 98 aa12.77□□□□□ -0.37
RTCA-201ENST00000260563 SCGB1C2P0DMR2 95 aa12.76□□□□□ -0.37
RTCA-201ENST00000260563 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
RTCA-201ENST00000260563 VAMP3Q15836 100 aa12.75□□□□□ -0.37
RTCA-201ENST00000260563 KRTAP4-16G5E9R7 235 aaPredicted RBP12.74□□□□□ -0.37
RTCA-201ENST00000260563 KRTAP4-5Q9BYR2 181 aa12.74□□□□□ -0.37
RTCA-201ENST00000260563 TRBV7-6A0A0J9YX20 115 aa12.73□□□□□ -0.37
RTCA-201ENST00000260563 ETDCA0A1B0GVM5 59 aa12.72□□□□□ -0.37
RTCA-201ENST00000260563 LYRM7Q5U5X0 104 aa12.72□□□□□ -0.37
RTCA-201ENST00000260563 H0YGX0 51 aa12.72□□□□□ -0.37
RTCA-201ENST00000260563 FABP2P12104 132 aa12.72□□□□□ -0.37
RTCA-201ENST00000260563 COX7BP24311 80 aa12.72□□□□□ -0.37
RTCA-201ENST00000260563 ELOF1P60002 83 aaKnown RBP12.72□□□□□ -0.37
RTCA-201ENST00000260563 B5MCH6 92 aa12.7□□□□□ -0.38
RTCA-201ENST00000260563 SRRM2Q9UQ35 2752 aaKnown RBP12.7□□□□□ -0.38
RTCA-201ENST00000260563 BCE1O60756 84 aa12.69□□□□□ -0.38
RTCA-201ENST00000260563 FAM19A1Q7Z5A9 133 aa12.69□□□□□ -0.38
RTCA-201ENST00000260563 PKHD1L1Q86WI1 4243 aa12.68□□□□□ -0.38
RTCA-201ENST00000260563 IGLV7-43P04211 117 aa12.68□□□□□ -0.38
RTCA-201ENST00000260563 CLEC2BQ92478 149 aa12.68□□□□□ -0.38
RTCA-201ENST00000260563 Q6ZRX8 168 aa12.67□□□□□ -0.38
RTCA-201ENST00000260563 FAM218AQ96MZ4 157 aa12.67□□□□□ -0.38
RTCA-201ENST00000260563 TCL1BO95988 128 aa12.66□□□□□ -0.38
RTCA-201ENST00000260563 PRLHP81277 87 aa12.65□□□□□ -0.38
RTCA-201ENST00000260563 LINC00575Q6W349 94 aa12.65□□□□□ -0.38
RTCA-201ENST00000260563 SPCS1Q9Y6A9 102 aa12.65□□□□□ -0.38
RTCA-201ENST00000260563 ABCA13Q86UQ4 5058 aa12.65□□□□□ -0.38
RTCA-201ENST00000260563 TRBV20-1A0A075B6N2 111 aa12.64□□□□□ -0.39
RTCA-201ENST00000260563 LST1O00453 97 aa12.63□□□□□ -0.39
RTCA-201ENST00000260563 INAFM2P0DMQ5 153 aa12.63□□□□□ -0.39
RTCA-201ENST00000260563 UBE2AP49459 152 aa12.63□□□□□ -0.39
RTCA-201ENST00000260563 A0A1B0GV90 55 aa12.62□□□□□ -0.39
RTCA-201ENST00000260563 H0Y9J4 135 aa12.62□□□□□ -0.39
RTCA-201ENST00000260563 ATXN8Q156A1 80 aa12.62□□□□□ -0.39
RTCA-201ENST00000260563 SLC25A20O43772 301 aa12.62□□□□□ -0.39
RTCA-201ENST00000260563 Q9BRP9 147 aa12.62□□□□□ -0.39
RTCA-201ENST00000260563 A0A1B0GX51 115 aa12.61□□□□□ -0.39
RTCA-201ENST00000260563 SPINK6Q6UWN8 80 aa12.61□□□□□ -0.39
RTCA-201ENST00000260563 KRTAP13-1Q8IUC0 172 aa12.61□□□□□ -0.39
RTCA-201ENST00000260563 DHRS4-AS1Q9P1J3 65 aa12.61□□□□□ -0.39
RTCA-201ENST00000260563 hADV29S1A0JD25 119 aa12.6□□□□□ -0.39
RTCA-201ENST00000260563 K7EP34 96 aa12.6□□□□□ -0.39
RTCA-201ENST00000260563 ZNF861PO60384 105 aa12.6□□□□□ -0.39
RTCA-201ENST00000260563 SNCGO76070 127 aa12.6□□□□□ -0.39
RTCA-201ENST00000260563 SMCR5Q8TEV8 140 aa12.59□□□□□ -0.39
RTCA-201ENST00000260563 TRACP01848 142 aa12.58□□□□□ -0.4
RTCA-201ENST00000260563 GTF2H5Q6ZYL4 71 aa12.57□□□□□ -0.4
RTCA-201ENST00000260563 HIGD2AQ9BW72 106 aa12.57□□□□□ -0.4
RTCA-201ENST00000260563 H3BMG7 143 aa12.56□□□□□ -0.4
RTCA-201ENST00000260563 DNAL4O96015 105 aa12.55□□□□□ -0.4
RTCA-201ENST00000260563 ERC2-IT1O76042 136 aa12.53□□□□□ -0.4
RTCA-201ENST00000260563 Q6ZQY7 126 aa12.52□□□□□ -0.41
RTCA-201ENST00000260563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.51□□□□□ -0.41
RTCA-201ENST00000260563 FLG2Q5D862 2391 aaPredicted RBP12.5□□□□□ -0.41
RTCA-201ENST00000260563 MYCBP2O75592 4640 aa12.5□□□□□ -0.41
RTCA-201ENST00000260563 C9JAW5 83 aa12.48□□□□□ -0.41
RTCA-201ENST00000260563 FAT3Q8TDW7 4589 aa12.48□□□□□ -0.41
RTCA-201ENST00000260563 ST20-AS1Q8NBB2 130 aa12.47□□□□□ -0.41
RTCA-201ENST00000260563 ORMDL1Q9P0S3 153 aa12.47□□□□□ -0.41
RTCA-201ENST00000260563 UBE2V1Q13404 147 aa12.46□□□□□ -0.42
RTCA-201ENST00000260563 OCIAD2Q56VL3 154 aa12.46□□□□□ -0.42
RTCA-201ENST00000260563 LRP1Q07954 4544 aaKnown RBP12.45□□□□□ -0.42
RTCA-201ENST00000260563 PCLOQ9Y6V0 5065 aa12.45□□□□□ -0.42
RTCA-201ENST00000260563 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
RTCA-201ENST00000260563 GHRHP01286 108 aa12.43□□□□□ -0.42
RTCA-201ENST00000260563 DEFB105AQ8NG35 78 aa12.43□□□□□ -0.42
RTCA-201ENST00000260563 IGLV5-48A0A075B6I7 105 aa12.42□□□□□ -0.42
RTCA-201ENST00000260563 LINC01547P58512 204 aaPredicted RBP12.42□□□□□ -0.42
RTCA-201ENST00000260563 BAALC-AS2P0C853 105 aa12.42□□□□□ -0.42
RTCA-201ENST00000260563 ZNF706Q9Y5V0 76 aaPredicted RBP12.42□□□□□ -0.42
RTCA-201ENST00000260563 PRO0461Q9UI25 63 aa12.41□□□□□ -0.42
RTCA-201ENST00000260563 H3BQ85 93 aa12.4□□□□□ -0.42
RTCA-201ENST00000260563 H3BT86 120 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms