RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 VAMP3Q15836 100 aa11.11□□□□□ -0.63
CCDC115-201ENST00000259229 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
CCDC115-201ENST00000259229 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
CCDC115-201ENST00000259229 SCGB1C2P0DMR2 95 aa11.1□□□□□ -0.63
CCDC115-201ENST00000259229 PRYO14603 147 aa11.09□□□□□ -0.63
CCDC115-201ENST00000259229 COX6CP09669 75 aa11.09□□□□□ -0.63
CCDC115-201ENST00000259229 SPRR1AP35321 89 aa11.09□□□□□ -0.63
CCDC115-201ENST00000259229 LYRM7Q5U5X0 104 aa11.09□□□□□ -0.63
CCDC115-201ENST00000259229 KRTAP4-16G5E9R7 235 aaPredicted RBP11.09□□□□□ -0.63
CCDC115-201ENST00000259229 DIRC1Q969H9 104 aa11.09□□□□□ -0.63
CCDC115-201ENST00000259229 DPH3Q96FX2 82 aa11.09□□□□□ -0.63
CCDC115-201ENST00000259229 LST1O00453 97 aa11.06□□□□□ -0.64
CCDC115-201ENST00000259229 CIRBP-AS1Q8TBR5 109 aa11.06□□□□□ -0.64
CCDC115-201ENST00000259229 CBY1Q9Y3M2 126 aa11.06□□□□□ -0.64
CCDC115-201ENST00000259229 TRBV20-1A0A075B6N2 111 aa11.06□□□□□ -0.64
CCDC115-201ENST00000259229 ELOF1P60002 83 aaKnown RBP11.06□□□□□ -0.64
CCDC115-201ENST00000259229 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
CCDC115-201ENST00000259229 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
CCDC115-201ENST00000259229 H0YGX0 51 aa11.05□□□□□ -0.64
CCDC115-201ENST00000259229 H3BMG7 143 aa11.04□□□□□ -0.64
CCDC115-201ENST00000259229 REG3GQ6UW15 175 aa11.04□□□□□ -0.64
CCDC115-201ENST00000259229 LRP1BQ9NZR2 4599 aa11.04□□□□□ -0.64
CCDC115-201ENST00000259229 UBE2BP63146 152 aa11.03□□□□□ -0.64
CCDC115-201ENST00000259229 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
CCDC115-201ENST00000259229 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
CCDC115-201ENST00000259229 COX7BP24311 80 aa11.02□□□□□ -0.64
CCDC115-201ENST00000259229 HAMPP81172 84 aa11.02□□□□□ -0.64
CCDC115-201ENST00000259229 UBE2V1Q13404 147 aa11.02□□□□□ -0.64
CCDC115-201ENST00000259229 ATXN8Q156A1 80 aa11.02□□□□□ -0.64
CCDC115-201ENST00000259229 GTF2H5Q6ZYL4 71 aa11.02□□□□□ -0.64
CCDC115-201ENST00000259229 LINC00575Q6W349 94 aa11.02□□□□□ -0.65
CCDC115-201ENST00000259229 B5MCH6 92 aa11.01□□□□□ -0.65
CCDC115-201ENST00000259229 Q6ZRX8 168 aa10.99□□□□□ -0.65
CCDC115-201ENST00000259229 TRACP01848 142 aa10.98□□□□□ -0.65
CCDC115-201ENST00000259229 PRO0461Q9UI25 63 aa10.98□□□□□ -0.65
CCDC115-201ENST00000259229 MTURNQ8N3F0 131 aa10.98□□□□□ -0.65
CCDC115-201ENST00000259229 ETDCA0A1B0GVM5 59 aa10.97□□□□□ -0.65
CCDC115-201ENST00000259229 A0A1B0GX51 115 aa10.97□□□□□ -0.65
CCDC115-201ENST00000259229 Q9BRP9 147 aa10.97□□□□□ -0.65
CCDC115-201ENST00000259229 PSORS1C2Q9UIG4 136 aa10.95□□□□□ -0.66
CCDC115-201ENST00000259229 BIRC6Q9NR09 4857 aa10.94□□□□□ -0.66
CCDC115-201ENST00000259229 hADV29S1A0JD25 119 aa10.94□□□□□ -0.66
CCDC115-201ENST00000259229 C9JAW5 83 aa10.94□□□□□ -0.66
CCDC115-201ENST00000259229 BCE1O60756 84 aa10.94□□□□□ -0.66
CCDC115-201ENST00000259229 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
CCDC115-201ENST00000259229 PRLHP81277 87 aa10.94□□□□□ -0.66
CCDC115-201ENST00000259229 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
CCDC115-201ENST00000259229 KRTAP13-1Q8IUC0 172 aa10.94□□□□□ -0.66
CCDC115-201ENST00000259229 XGP55808 180 aa10.93□□□□□ -0.66
CCDC115-201ENST00000259229 SMCR5Q8TEV8 140 aa10.92□□□□□ -0.66
CCDC115-201ENST00000259229 APOBP04114 4563 aaKnown RBP10.92□□□□□ -0.66
CCDC115-201ENST00000259229 H0Y9J4 135 aa10.91□□□□□ -0.66
CCDC115-201ENST00000259229 INAFM2P0DMQ5 153 aa10.91□□□□□ -0.66
CCDC115-201ENST00000259229 ERC2-IT1O76042 136 aa10.9□□□□□ -0.66
CCDC115-201ENST00000259229 DHRS4-AS1Q9P1J3 65 aa10.9□□□□□ -0.66
CCDC115-201ENST00000259229 SLC25A20O43772 301 aa10.89□□□□□ -0.67
CCDC115-201ENST00000259229 DNAL4O96015 105 aa10.89□□□□□ -0.67
CCDC115-201ENST00000259229 Q6ZQY7 126 aa10.89□□□□□ -0.67
CCDC115-201ENST00000259229 LINC01600Q96MT4 127 aa10.89□□□□□ -0.67
CCDC115-201ENST00000259229 F8W1H4 67 aa10.87□□□□□ -0.67
CCDC115-201ENST00000259229 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
CCDC115-201ENST00000259229 H3BT86 120 aa10.86□□□□□ -0.67
CCDC115-201ENST00000259229 UBE2AP49459 152 aa10.86□□□□□ -0.67
CCDC115-201ENST00000259229 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
CCDC115-201ENST00000259229 ANKRD29Q8N6D5 301 aa10.85□□□□□ -0.67
CCDC115-201ENST00000259229 ORMDL1Q9P0S3 153 aa10.85□□□□□ -0.67
CCDC115-201ENST00000259229 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
CCDC115-201ENST00000259229 HIGD2AQ9BW72 106 aa10.84□□□□□ -0.67
CCDC115-201ENST00000259229 SNCGO76070 127 aa10.84□□□□□ -0.67
CCDC115-201ENST00000259229 BAALC-AS2P0C853 105 aa10.84□□□□□ -0.67
CCDC115-201ENST00000259229 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
CCDC115-201ENST00000259229 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
CCDC115-201ENST00000259229 IGLV5-48A0A075B6I7 105 aa10.8□□□□□ -0.68
CCDC115-201ENST00000259229 ZNF861PO60384 105 aa10.8□□□□□ -0.68
CCDC115-201ENST00000259229 SRRM2Q9UQ35 2752 aaKnown RBP10.79□□□□□ -0.68
CCDC115-201ENST00000259229 OCIAD2Q56VL3 154 aa10.79□□□□□ -0.68
CCDC115-201ENST00000259229 ETDBQ3ZM63 59 aa10.78□□□□□ -0.68
CCDC115-201ENST00000259229 Q8N377 158 aa10.78□□□□□ -0.68
CCDC115-201ENST00000259229 SMR3BP02814 79 aaPredicted RBP10.77□□□□□ -0.68
CCDC115-201ENST00000259229 TMEM256-PLSCR3K7ERE1 68 aa10.76□□□□□ -0.69
CCDC115-201ENST00000259229 TEN1Q86WV5 123 aa10.76□□□□□ -0.69
CCDC115-201ENST00000259229 KRTAP10-4P60372 401 aaPredicted RBP10.75□□□□□ -0.69
CCDC115-201ENST00000259229 DEFB105AQ8NG35 78 aa10.75□□□□□ -0.69
CCDC115-201ENST00000259229 VPS13BQ7Z7G8 4022 aa10.75□□□□□ -0.69
CCDC115-201ENST00000259229 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
CCDC115-201ENST00000259229 PPDPFLQ8WWR9 84 aa10.73□□□□□ -0.69
CCDC115-201ENST00000259229 H3BQ85 93 aa10.73□□□□□ -0.69
CCDC115-201ENST00000259229 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
CCDC115-201ENST00000259229 OBSCN-AS1Q96MR7 158 aa10.73□□□□□ -0.69
CCDC115-201ENST00000259229 SPRR1BP22528 89 aa10.72□□□□□ -0.69
CCDC115-201ENST00000259229 SMIM29Q86T20 159 aa10.72□□□□□ -0.69
CCDC115-201ENST00000259229 C3orf22Q8N5N4 141 aa10.72□□□□□ -0.69
CCDC115-201ENST00000259229 TEX49A0A1B0GTD5 131 aa10.71□□□□□ -0.69
CCDC115-201ENST00000259229 SPRR4Q96PI1 79 aa10.71□□□□□ -0.69
CCDC115-201ENST00000259229 FAT1Q14517 4588 aa10.71□□□□□ -0.7
CCDC115-201ENST00000259229 HSPG2P98160 4391 aa10.71□□□□□ -0.7
CCDC115-201ENST00000259229 GHRHP01286 108 aa10.7□□□□□ -0.7
CCDC115-201ENST00000259229 NDUFV3P56181 108 aaKnown RBP10.69□□□□□ -0.7
CCDC115-201ENST00000259229 LINC00483Q53H64 154 aa10.68□□□□□ -0.7
CCDC115-201ENST00000259229 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms