RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 COX7CP15954 63 aa10.73□□□□□ -0.69
UBQLN1-201ENST00000257468 GHRHP01286 108 aa10.72□□□□□ -0.69
UBQLN1-201ENST00000257468 MGAM2Q2M2H8 2515 aa10.72□□□□□ -0.69
UBQLN1-201ENST00000257468 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
UBQLN1-201ENST00000257468 KCNQ1DNQ9H478 68 aa10.72□□□□□ -0.69
UBQLN1-201ENST00000257468 TLX1NBP0CAT3 122 aa10.7□□□□□ -0.7
UBQLN1-201ENST00000257468 Q6ZVQ6 151 aa10.7□□□□□ -0.7
UBQLN1-201ENST00000257468 KRTAP7-1Q8IUC3 87 aa10.7□□□□□ -0.7
UBQLN1-201ENST00000257468 HAMPP81172 84 aa10.69□□□□□ -0.7
UBQLN1-201ENST00000257468 UPK3BQ9BT76 320 aa10.69□□□□□ -0.7
UBQLN1-201ENST00000257468 LINC01547P58512 204 aaPredicted RBP10.68□□□□□ -0.7
UBQLN1-201ENST00000257468 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
UBQLN1-201ENST00000257468 DNAH10Q8IVF4 4471 aa10.67□□□□□ -0.7
UBQLN1-201ENST00000257468 PDE6GP18545 87 aa10.67□□□□□ -0.7
UBQLN1-201ENST00000257468 CYSTM1Q9H1C7 97 aa10.67□□□□□ -0.7
UBQLN1-201ENST00000257468 FAM19A5Q7Z5A7 132 aaPredicted RBP10.66□□□□□ -0.7
UBQLN1-201ENST00000257468 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
UBQLN1-201ENST00000257468 STAB2Q8WWQ8 2551 aa10.66□□□□□ -0.7
UBQLN1-201ENST00000257468 RMI2Q96E14 147 aa10.65□□□□□ -0.7
UBQLN1-201ENST00000257468 SCXQ7RTU7 201 aa10.64□□□□□ -0.71
UBQLN1-201ENST00000257468 SERP2Q8N6R1 65 aa10.64□□□□□ -0.71
UBQLN1-201ENST00000257468 PLA2G2DQ9UNK4 145 aa10.64□□□□□ -0.71
UBQLN1-201ENST00000257468 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
UBQLN1-201ENST00000257468 Q9BRP9 147 aa10.64□□□□□ -0.71
UBQLN1-201ENST00000257468 Q8N377 158 aa10.63□□□□□ -0.71
UBQLN1-201ENST00000257468 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
UBQLN1-201ENST00000257468 Q6ZRX8 168 aa10.62□□□□□ -0.71
UBQLN1-201ENST00000257468 IGLV5-37A0A075B6J1 123 aa10.61□□□□□ -0.71
UBQLN1-201ENST00000257468 CRYGAP11844 174 aa10.61□□□□□ -0.71
UBQLN1-201ENST00000257468 DNAH9Q9NYC9 4486 aa10.61□□□□□ -0.71
UBQLN1-201ENST00000257468 ST20-AS1Q8NBB2 130 aa10.6□□□□□ -0.71
UBQLN1-201ENST00000257468 MDFIQ99750 246 aa10.6□□□□□ -0.71
UBQLN1-201ENST00000257468 LOC107984640A0A0U1RRK4 108 aa10.59□□□□□ -0.71
UBQLN1-201ENST00000257468 ETDCA0A1B0GVM5 59 aa10.59□□□□□ -0.71
UBQLN1-201ENST00000257468 PRYO14603 147 aa10.59□□□□□ -0.71
UBQLN1-201ENST00000257468 MRPL55Q7Z7F7 128 aaKnown RBP10.59□□□□□ -0.71
UBQLN1-201ENST00000257468 DNAH7Q8WXX0 4024 aa10.59□□□□□ -0.71
UBQLN1-201ENST00000257468 SPRR1AP35321 89 aa10.58□□□□□ -0.72
UBQLN1-201ENST00000257468 SMIM20Q8N5G0 67 aa10.58□□□□□ -0.72
UBQLN1-201ENST00000257468 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
UBQLN1-201ENST00000257468 ERC2-IT1O76042 136 aa10.57□□□□□ -0.72
UBQLN1-201ENST00000257468 C3orf84H3BNL1 204 aa10.56□□□□□ -0.72
UBQLN1-201ENST00000257468 CXCL6P80162 114 aa10.56□□□□□ -0.72
UBQLN1-201ENST00000257468 DHRS4-AS1Q9P1J3 65 aa10.56□□□□□ -0.72
UBQLN1-201ENST00000257468 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
UBQLN1-201ENST00000257468 TENM2Q9NT68 2774 aa10.55□□□□□ -0.72
UBQLN1-201ENST00000257468 A0A096LNI7 61 aa10.55□□□□□ -0.72
UBQLN1-201ENST00000257468 UBE2DNLQ8IWF7 75 aa10.54□□□□□ -0.72
UBQLN1-201ENST00000257468 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.53□□□□□ -0.72
UBQLN1-201ENST00000257468 PSCAO43653 123 aa10.53□□□□□ -0.72
UBQLN1-201ENST00000257468 Q8N9L7 120 aa10.53□□□□□ -0.72
UBQLN1-201ENST00000257468 UBE2BP63146 152 aa10.53□□□□□ -0.72
UBQLN1-201ENST00000257468 APLNQ9ULZ1 77 aa10.53□□□□□ -0.72
UBQLN1-201ENST00000257468 IGLV5-48A0A075B6I7 105 aa10.52□□□□□ -0.73
UBQLN1-201ENST00000257468 BCE1O60756 84 aa10.51□□□□□ -0.73
UBQLN1-201ENST00000257468 REG3GQ6UW15 175 aa10.51□□□□□ -0.73
UBQLN1-201ENST00000257468 A0A1W2PNN7 141 aa10.5□□□□□ -0.73
UBQLN1-201ENST00000257468 NREPQ16612 68 aa10.49□□□□□ -0.73
UBQLN1-201ENST00000257468 A0A1W2PNM2 257 aa10.48□□□□□ -0.73
UBQLN1-201ENST00000257468 TNP2Q05952 138 aa10.48□□□□□ -0.73
UBQLN1-201ENST00000257468 C16orf90A8MZG2 172 aa10.47□□□□□ -0.73
UBQLN1-201ENST00000257468 CNBPP62633 177 aaKnown RBP10.47□□□□□ -0.73
UBQLN1-201ENST00000257468 C1orf137Q5JT78 98 aa10.47□□□□□ -0.73
UBQLN1-201ENST00000257468 C20orf197Q8N268 126 aa10.47□□□□□ -0.73
UBQLN1-201ENST00000257468 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
UBQLN1-201ENST00000257468 DYNC2H1Q8NCM8 4307 aaKnown RBP10.46□□□□□ -0.73
UBQLN1-201ENST00000257468 BPY2O14599 106 aa10.46□□□□□ -0.74
UBQLN1-201ENST00000257468 PRLHP81277 87 aa10.46□□□□□ -0.74
UBQLN1-201ENST00000257468 PLECQ15149 4684 aaKnown RBP10.45□□□□□ -0.74
UBQLN1-201ENST00000257468 IGKV4-1P06312 121 aa10.44□□□□□ -0.74
UBQLN1-201ENST00000257468 TRAV7A0A075B6U4 112 aa10.44□□□□□ -0.74
UBQLN1-201ENST00000257468 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
UBQLN1-201ENST00000257468 TMEM258P61165 79 aa10.44□□□□□ -0.74
UBQLN1-201ENST00000257468 B9D2Q9BPU9 175 aa10.44□□□□□ -0.74
UBQLN1-201ENST00000257468 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBQLN1-201ENST00000257468 SMIM29Q86T20 159 aa10.42□□□□□ -0.74
UBQLN1-201ENST00000257468 KRTAP11-1Q8IUC1 163 aa10.42□□□□□ -0.74
UBQLN1-201ENST00000257468 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
UBQLN1-201ENST00000257468 Q8NBF4 154 aa10.4□□□□□ -0.74
UBQLN1-201ENST00000257468 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.75
UBQLN1-201ENST00000257468 SNURFQ9Y675 71 aa10.38□□□□□ -0.75
UBQLN1-201ENST00000257468 SRRM2Q9UQ35 2752 aaKnown RBP10.38□□□□□ -0.75
UBQLN1-201ENST00000257468 J3KT08 172 aa10.37□□□□□ -0.75
UBQLN1-201ENST00000257468 LINC00476Q8WZB0 136 aa10.37□□□□□ -0.75
UBQLN1-201ENST00000257468 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
UBQLN1-201ENST00000257468 RPS28P62857 69 aaKnown RBP10.37□□□□□ -0.75
UBQLN1-201ENST00000257468 NBDYA0A0U1RRE5 68 aa10.36□□□□□ -0.75
UBQLN1-201ENST00000257468 A0A1B0GW54 56 aa10.36□□□□□ -0.75
UBQLN1-201ENST00000257468 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
UBQLN1-201ENST00000257468 C14orf177Q52M58 125 aa10.36□□□□□ -0.75
UBQLN1-201ENST00000257468 SPRR4Q96PI1 79 aa10.36□□□□□ -0.75
UBQLN1-201ENST00000257468 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
UBQLN1-201ENST00000257468 PANO1I0J062 215 aa10.34□□□□□ -0.75
UBQLN1-201ENST00000257468 F8WEM9 126 aa10.33□□□□□ -0.76
UBQLN1-201ENST00000257468 IGFL1Q6UW32 110 aa10.33□□□□□ -0.76
UBQLN1-201ENST00000257468 C9orf163Q8N9P6 203 aa10.33□□□□□ -0.76
UBQLN1-201ENST00000257468 SVIPQ8NHG7 77 aa10.33□□□□□ -0.76
UBQLN1-201ENST00000257468 Q6ZRN7 208 aaPredicted RBP10.32□□□□□ -0.76
UBQLN1-201ENST00000257468 H7BZZ5 65 aa10.32□□□□□ -0.76
UBQLN1-201ENST00000257468 NUPR2A6NF83 97 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms