RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 KLK12Q9UKR0 248 aa7.6□□□□□ -1.19
RFPL3-201ENST00000249007 C9orf163Q8N9P6 203 aa7.59□□□□□ -1.19
RFPL3-201ENST00000249007 LITAFQ99732 161 aa7.59□□□□□ -1.19
RFPL3-201ENST00000249007 FSIP2Q5CZC0 6907 aa7.59□□□□□ -1.19
RFPL3-201ENST00000249007 IGKV3D-20A0A0C4DH25 116 aa7.58□□□□□ -1.2
RFPL3-201ENST00000249007 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
RFPL3-201ENST00000249007 C14orf178Q8N769 122 aaPredicted RBP7.58□□□□□ -1.2
RFPL3-201ENST00000249007 TMEM243Q9BU79 118 aa7.58□□□□□ -1.2
RFPL3-201ENST00000249007 IGHV3-73A0A0B4J1V6 119 aa7.57□□□□□ -1.2
RFPL3-201ENST00000249007 TSHBP01222 138 aa7.57□□□□□ -1.2
RFPL3-201ENST00000249007 POLR2KP53803 58 aaKnown RBP7.57□□□□□ -1.2
RFPL3-201ENST00000249007 KLKP1Q107X0 134 aa7.57□□□□□ -1.2
RFPL3-201ENST00000249007 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
RFPL3-201ENST00000249007 OBSCN-AS1Q96MR7 158 aa7.57□□□□□ -1.2
RFPL3-201ENST00000249007 UBE2D4Q9Y2X8 147 aa7.57□□□□□ -1.2
RFPL3-201ENST00000249007 H7C2G1 150 aa7.56□□□□□ -1.2
RFPL3-201ENST00000249007 CIRBPQ14011 172 aaKnown RBP7.56□□□□□ -1.2
RFPL3-201ENST00000249007 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
RFPL3-201ENST00000249007 TRBV27A0A0K0K1C4 114 aa7.55□□□□□ -1.2
RFPL3-201ENST00000249007 GNRH2O43555 120 aa7.55□□□□□ -1.2
RFPL3-201ENST00000249007 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
RFPL3-201ENST00000249007 DNAL4O96015 105 aa7.55□□□□□ -1.2
RFPL3-201ENST00000249007 BAALC-AS2P0C853 105 aa7.55□□□□□ -1.2
RFPL3-201ENST00000249007 REG3GQ6UW15 175 aa7.55□□□□□ -1.2
RFPL3-201ENST00000249007 C7orf33Q8WU49 177 aa7.55□□□□□ -1.2
RFPL3-201ENST00000249007 TRAV7A0A075B6U4 112 aa7.54□□□□□ -1.2
RFPL3-201ENST00000249007 A0A087WYN8 130 aa7.54□□□□□ -1.2
RFPL3-201ENST00000249007 CYSTM1Q9H1C7 97 aa7.54□□□□□ -1.2
RFPL3-201ENST00000249007 IGHV1-58A0A0C4DH39 117 aa7.53□□□□□ -1.2
RFPL3-201ENST00000249007 CLEC2BQ92478 149 aa7.53□□□□□ -1.2
RFPL3-201ENST00000249007 PKIGQ9Y2B9 76 aa7.53□□□□□ -1.2
RFPL3-201ENST00000249007 XCL1P47992 114 aa7.52□□□□□ -1.21
RFPL3-201ENST00000249007 PRR3P79522 188 aaKnown RBP7.52□□□□□ -1.21
RFPL3-201ENST00000249007 CD164Q04900 197 aa7.52□□□□□ -1.21
RFPL3-201ENST00000249007 LINC01561Q8N1V8 128 aa7.52□□□□□ -1.21
RFPL3-201ENST00000249007 TRAV21A0A0B4J279 112 aa7.51□□□□□ -1.21
RFPL3-201ENST00000249007 TRBV7-6A0A0J9YX20 115 aa7.51□□□□□ -1.21
RFPL3-201ENST00000249007 CHCHD7Q9BUK0 85 aa7.51□□□□□ -1.21
RFPL3-201ENST00000249007 H7BZZ5 65 aa7.5□□□□□ -1.21
RFPL3-201ENST00000249007 PRSS2P07478 247 aa7.5□□□□□ -1.21
RFPL3-201ENST00000249007 CHTF8P0CG12 524 aa7.5□□□□□ -1.21
RFPL3-201ENST00000249007 PRR15Q8IV56 129 aa7.5□□□□□ -1.21
RFPL3-201ENST00000249007 H0YGX0 51 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 CRPP02741 224 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 PMAIP1Q13794 54 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 SPACA4Q8TDM5 124 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 NDUFA12Q9UI09 145 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 GHRHP01286 108 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 ENHOQ6UWT2 76 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 PLAC8Q9NZF1 115 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 Q9UF83 564 aa7.49□□□□□ -1.21
RFPL3-201ENST00000249007 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
RFPL3-201ENST00000249007 RPL28P46779 137 aaKnown RBP7.48□□□□□ -1.21
RFPL3-201ENST00000249007 FP248Q71RG6 208 aaPredicted RBP7.48□□□□□ -1.21
RFPL3-201ENST00000249007 FAM19A1Q7Z5A9 133 aa7.48□□□□□ -1.21
RFPL3-201ENST00000249007 C22orf24Q9Y442 160 aa7.48□□□□□ -1.21
RFPL3-201ENST00000249007 PHLDA3Q9Y5J5 127 aa7.48□□□□□ -1.21
RFPL3-201ENST00000249007 IGHV3-64A0A075B6Q5 118 aa7.47□□□□□ -1.21
RFPL3-201ENST00000249007 NDUFA1O15239 70 aa7.47□□□□□ -1.21
RFPL3-201ENST00000249007 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
RFPL3-201ENST00000249007 TRAV13-2A0A0B4J235 113 aa7.46□□□□□ -1.22
RFPL3-201ENST00000249007 C20orf203Q8NBC4 194 aa7.46□□□□□ -1.22
RFPL3-201ENST00000249007 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
RFPL3-201ENST00000249007 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
RFPL3-201ENST00000249007 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
RFPL3-201ENST00000249007 S100A4P26447 101 aaKnown RBP7.45□□□□□ -1.22
RFPL3-201ENST00000249007 CCKP06307 115 aa7.44□□□□□ -1.22
RFPL3-201ENST00000249007 ANGP03950 147 aaKnown RBP7.43□□□□□ -1.22
RFPL3-201ENST00000249007 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 BRK1Q8WUW1 75 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 CRCT1Q9UGL9 99 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 IGLV4-3A0A075B6K6 122 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 IGLV5-45A0A087WSX0 123 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 A0A0U1RRA0 63 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 MGPP08493 103 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 ADAMTSL4-AS1Q5T5F5 129 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 LINC00308Q8TCZ7 52 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
RFPL3-201ENST00000249007 IGKV3D-7A0A0C4DH55 119 aa7.41□□□□□ -1.22
RFPL3-201ENST00000249007 ZNF561-AS1K7EIQ3 104 aa7.41□□□□□ -1.22
RFPL3-201ENST00000249007 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.22
RFPL3-201ENST00000249007 SUMO4Q6EEV6 95 aa7.4□□□□□ -1.22
RFPL3-201ENST00000249007 KRTAP26-1Q6PEX3 210 aa7.4□□□□□ -1.22
RFPL3-201ENST00000249007 FAM19A3Q7Z5A8 133 aa7.4□□□□□ -1.22
RFPL3-201ENST00000249007 SLPIP03973 132 aa7.39□□□□□ -1.23
RFPL3-201ENST00000249007 RNASE3P12724 160 aaKnown RBP7.39□□□□□ -1.23
RFPL3-201ENST00000249007 CLPSL2Q6UWE3 100 aa7.39□□□□□ -1.23
RFPL3-201ENST00000249007 A0A087WWL8 130 aa7.38□□□□□ -1.23
RFPL3-201ENST00000249007 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
RFPL3-201ENST00000249007 H3BQ85 93 aa7.38□□□□□ -1.23
RFPL3-201ENST00000249007 COX6A2Q02221 97 aa7.38□□□□□ -1.23
RFPL3-201ENST00000249007 PRR4Q16378 134 aa7.38□□□□□ -1.23
RFPL3-201ENST00000249007 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
RFPL3-201ENST00000249007 TRBV6-8A0A0A6YYG3 113 aa7.37□□□□□ -1.23
RFPL3-201ENST00000249007 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
RFPL3-201ENST00000249007 RBM3P98179 157 aaKnown RBP7.37□□□□□ -1.23
RFPL3-201ENST00000249007 PIK3CD-AS1Q5SR53 167 aa7.37□□□□□ -1.23
RFPL3-201ENST00000249007 PRR34Q9NV39 138 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms