RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 LITAFQ99732 161 aa7.67□□□□□ -1.18
EFNB2-201ENST00000245323 FAM30AQ9NZY2 134 aa7.67□□□□□ -1.18
EFNB2-201ENST00000245323 CUBNO60494 3623 aa7.67□□□□□ -1.18
EFNB2-201ENST00000245323 A0A087WSZ3 146 aa7.66□□□□□ -1.18
EFNB2-201ENST00000245323 MPLKIPQ8TAP9 179 aa7.66□□□□□ -1.18
EFNB2-201ENST00000245323 LINC00167Q96N53 147 aa7.66□□□□□ -1.18
EFNB2-201ENST00000245323 TMEM258P61165 79 aa7.66□□□□□ -1.18
EFNB2-201ENST00000245323 ATP5EP2Q5VTU8 51 aa7.66□□□□□ -1.18
EFNB2-201ENST00000245323 SERP2Q8N6R1 65 aa7.66□□□□□ -1.18
EFNB2-201ENST00000245323 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.19
EFNB2-201ENST00000245323 FBN1P35555 2871 aaKnown RBP7.64□□□□□ -1.19
EFNB2-201ENST00000245323 FAM240AA0A1B0GVK7 77 aa7.64□□□□□ -1.19
EFNB2-201ENST00000245323 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
EFNB2-201ENST00000245323 H3BNG1 76 aa7.64□□□□□ -1.19
EFNB2-201ENST00000245323 J3KT08 172 aa7.64□□□□□ -1.19
EFNB2-201ENST00000245323 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
EFNB2-201ENST00000245323 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
EFNB2-201ENST00000245323 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
EFNB2-201ENST00000245323 WWC2-AS2Q96NR7 200 aa7.63□□□□□ -1.19
EFNB2-201ENST00000245323 Q9BRP9 147 aa7.63□□□□□ -1.19
EFNB2-201ENST00000245323 CASC10Q5T4H9 136 aa7.62□□□□□ -1.19
EFNB2-201ENST00000245323 Q6JHZ5 121 aa7.62□□□□□ -1.19
EFNB2-201ENST00000245323 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
EFNB2-201ENST00000245323 ZFHX3Q15911 3703 aa7.62□□□□□ -1.19
EFNB2-201ENST00000245323 Q6ZRP5 223 aa7.62□□□□□ -1.19
EFNB2-201ENST00000245323 COX7CP15954 63 aa7.62□□□□□ -1.19
EFNB2-201ENST00000245323 Q6ZVQ6 151 aa7.62□□□□□ -1.19
EFNB2-201ENST00000245323 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
EFNB2-201ENST00000245323 LINC01561Q8N1V8 128 aa7.6□□□□□ -1.19
EFNB2-201ENST00000245323 FAM236DA0A1B0GTK5 79 aa7.6□□□□□ -1.19
EFNB2-201ENST00000245323 FAM236CP0DP71 79 aa7.6□□□□□ -1.19
EFNB2-201ENST00000245323 LINC01547P58512 204 aaPredicted RBP7.6□□□□□ -1.19
EFNB2-201ENST00000245323 TM2D3Q9BRN9 247 aa7.59□□□□□ -1.19
EFNB2-201ENST00000245323 Q6Q795 121 aa7.58□□□□□ -1.2
EFNB2-201ENST00000245323 ST20-AS1Q8NBB2 130 aa7.58□□□□□ -1.2
EFNB2-201ENST00000245323 RTL8CO15255 209 aa7.58□□□□□ -1.2
EFNB2-201ENST00000245323 RETNLBQ9BQ08 111 aa7.57□□□□□ -1.2
EFNB2-201ENST00000245323 IGHV6-1A0A0B4J1U7 121 aa7.56□□□□□ -1.2
EFNB2-201ENST00000245323 LINC00208Q96KT6 92 aa7.56□□□□□ -1.2
EFNB2-201ENST00000245323 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
EFNB2-201ENST00000245323 TENM3Q9P273 2699 aa7.56□□□□□ -1.2
EFNB2-201ENST00000245323 C16orf90A8MZG2 172 aa7.55□□□□□ -1.2
EFNB2-201ENST00000245323 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
EFNB2-201ENST00000245323 PRYO14603 147 aa7.55□□□□□ -1.2
EFNB2-201ENST00000245323 SERTAD4-AS1Q5TG53 156 aa7.55□□□□□ -1.2
EFNB2-201ENST00000245323 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
EFNB2-201ENST00000245323 TENM1Q9UKZ4 2725 aa7.54□□□□□ -1.2
EFNB2-201ENST00000245323 BRK1Q8WUW1 75 aa7.53□□□□□ -1.2
EFNB2-201ENST00000245323 C15orf56Q8N910 161 aa7.52□□□□□ -1.2
EFNB2-201ENST00000245323 PRR34Q9NV39 138 aa7.52□□□□□ -1.21
EFNB2-201ENST00000245323 SVEP1Q4LDE5 3571 aa7.52□□□□□ -1.21
EFNB2-201ENST00000245323 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
EFNB2-201ENST00000245323 SMR3BP02814 79 aaPredicted RBP7.52□□□□□ -1.21
EFNB2-201ENST00000245323 VPREB1P12018 145 aa7.51□□□□□ -1.21
EFNB2-201ENST00000245323 A0A0G2JQZ4 141 aa7.51□□□□□ -1.21
EFNB2-201ENST00000245323 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
EFNB2-201ENST00000245323 MOBPQ13875 183 aa7.5□□□□□ -1.21
EFNB2-201ENST00000245323 CSMD1Q96PZ7 3565 aa7.5□□□□□ -1.21
EFNB2-201ENST00000245323 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
EFNB2-201ENST00000245323 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
EFNB2-201ENST00000245323 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
EFNB2-201ENST00000245323 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
EFNB2-201ENST00000245323 EPM2AB3EWF7 344 aa7.49□□□□□ -1.21
EFNB2-201ENST00000245323 PDZD2O15018 2839 aa7.49□□□□□ -1.21
EFNB2-201ENST00000245323 CSMD2Q7Z408 3487 aa7.48□□□□□ -1.21
EFNB2-201ENST00000245323 F8WDY8 70 aa7.48□□□□□ -1.21
EFNB2-201ENST00000245323 Q6ZRX8 168 aa7.48□□□□□ -1.21
EFNB2-201ENST00000245323 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
EFNB2-201ENST00000245323 SPACA4Q8TDM5 124 aa7.47□□□□□ -1.21
EFNB2-201ENST00000245323 C9orf129Q5T035 196 aaKnown RBP7.47□□□□□ -1.21
EFNB2-201ENST00000245323 APLNQ9ULZ1 77 aa7.47□□□□□ -1.21
EFNB2-201ENST00000245323 VWFP04275 2813 aa7.47□□□□□ -1.21
EFNB2-201ENST00000245323 A0A0U1RQV1 116 aa7.46□□□□□ -1.22
EFNB2-201ENST00000245323 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
EFNB2-201ENST00000245323 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.22
EFNB2-201ENST00000245323 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
EFNB2-201ENST00000245323 Q6ZQT0 140 aa7.45□□□□□ -1.22
EFNB2-201ENST00000245323 LINC00476Q8WZB0 136 aa7.45□□□□□ -1.22
EFNB2-201ENST00000245323 FAM104AQ969W3 186 aa7.45□□□□□ -1.22
EFNB2-201ENST00000245323 TRBV7-7A0A0K0K1E9 115 aa7.44□□□□□ -1.22
EFNB2-201ENST00000245323 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
EFNB2-201ENST00000245323 A0A087WTM6 91 aa7.44□□□□□ -1.22
EFNB2-201ENST00000245323 RPL37AP61513 92 aaKnown RBP7.44□□□□□ -1.22
EFNB2-201ENST00000245323 TMEM254Q8TBM7 123 aa7.43□□□□□ -1.22
EFNB2-201ENST00000245323 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
EFNB2-201ENST00000245323 HCG22E2RYF7 251 aa7.4□□□□□ -1.22
EFNB2-201ENST00000245323 NDUFC1O43677 76 aa7.4□□□□□ -1.22
EFNB2-201ENST00000245323 TNP2Q05952 138 aa7.4□□□□□ -1.22
EFNB2-201ENST00000245323 Q8NBF4 154 aa7.39□□□□□ -1.23
EFNB2-201ENST00000245323 LINC00528Q8N1L1 170 aa7.39□□□□□ -1.23
EFNB2-201ENST00000245323 C9orf163Q8N9P6 203 aa7.39□□□□□ -1.23
EFNB2-201ENST00000245323 H0Y9P7 68 aa7.39□□□□□ -1.23
EFNB2-201ENST00000245323 WIPF1O43516 503 aa7.39□□□□□ -1.23
EFNB2-201ENST00000245323 IGLV1-50A0A075B6I6 118 aa7.37□□□□□ -1.23
EFNB2-201ENST00000245323 CXCL6P80162 114 aa7.37□□□□□ -1.23
EFNB2-201ENST00000245323 SPINK1P00995 79 aa7.37□□□□□ -1.23
EFNB2-201ENST00000245323 TGP01266 2768 aa7.36□□□□□ -1.23
EFNB2-201ENST00000245323 ERC2-IT1O76042 136 aa7.36□□□□□ -1.23
EFNB2-201ENST00000245323 SRRM2Q9UQ35 2752 aaKnown RBP7.35□□□□□ -1.23
EFNB2-201ENST00000245323 TRBV7-6A0A0J9YX20 115 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms