RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 SPATA3Q8NHX4 192 aa6.34□□□□□ -1.39
SRSF6-201ENST00000244020 M0R378 163 aa6.34□□□□□ -1.4
SRSF6-201ENST00000244020 CXCL6P80162 114 aa6.33□□□□□ -1.4
SRSF6-201ENST00000244020 LINC01006Q8NI28 216 aa6.33□□□□□ -1.4
SRSF6-201ENST00000244020 HECTD1Q9ULT8 2610 aa6.33□□□□□ -1.4
SRSF6-201ENST00000244020 LOC110117498A0A087WWA1 95 aa6.33□□□□□ -1.4
SRSF6-201ENST00000244020 C6orf223Q8N319 242 aa6.33□□□□□ -1.4
SRSF6-201ENST00000244020 C1orf64Q8NEQ6 169 aa6.32□□□□□ -1.4
SRSF6-201ENST00000244020 BCE1O60756 84 aa6.32□□□□□ -1.4
SRSF6-201ENST00000244020 SYCNQ0VAF6 134 aa6.32□□□□□ -1.4
SRSF6-201ENST00000244020 KLKP1Q107X0 134 aa6.32□□□□□ -1.4
SRSF6-201ENST00000244020 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
SRSF6-201ENST00000244020 KIAA0087Q14695 138 aa6.31□□□□□ -1.4
SRSF6-201ENST00000244020 RETNLBQ9BQ08 111 aa6.31□□□□□ -1.4
SRSF6-201ENST00000244020 H3BS24 57 aa6.31□□□□□ -1.4
SRSF6-201ENST00000244020 NBEAL2Q6ZNJ1 2754 aa6.31□□□□□ -1.4
SRSF6-201ENST00000244020 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
SRSF6-201ENST00000244020 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
SRSF6-201ENST00000244020 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
SRSF6-201ENST00000244020 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
SRSF6-201ENST00000244020 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.29□□□□□ -1.4
SRSF6-201ENST00000244020 ATRQ13535 2644 aa6.29□□□□□ -1.4
SRSF6-201ENST00000244020 NF1P21359 2839 aa6.29□□□□□ -1.4
SRSF6-201ENST00000244020 Q8NDZ9 215 aa6.29□□□□□ -1.4
SRSF6-201ENST00000244020 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
SRSF6-201ENST00000244020 FLNBO75369 2602 aaKnown RBP6.29□□□□□ -1.4
SRSF6-201ENST00000244020 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
SRSF6-201ENST00000244020 GCN1Q92616 2671 aaKnown RBP6.29□□□□□ -1.4
SRSF6-201ENST00000244020 C8orf87E5RJ46 101 aa6.29□□□□□ -1.4
SRSF6-201ENST00000244020 IGLV1-51P01701 117 aa6.29□□□□□ -1.4
SRSF6-201ENST00000244020 SETXQ7Z333 2677 aaKnown RBP6.28□□□□□ -1.4
SRSF6-201ENST00000244020 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
SRSF6-201ENST00000244020 HELZ2Q9BYK8 2649 aaKnown RBP6.28□□□□□ -1.4
SRSF6-201ENST00000244020 KTN1-AS1Q86SY8 53 aa6.28□□□□□ -1.4
SRSF6-201ENST00000244020 TRAV22A0A0B4J277 110 aa6.28□□□□□ -1.4
SRSF6-201ENST00000244020 NIPBLQ6KC79 2804 aaeCLIP6.28□□□□□ -1.4
SRSF6-201ENST00000244020 IGHV6-1A0A0B4J1U7 121 aa6.27□□□□□ -1.41
SRSF6-201ENST00000244020 DEFB113Q30KQ7 82 aa6.27□□□□□ -1.41
SRSF6-201ENST00000244020 KRTAP10-9P60411 292 aa6.27□□□□□ -1.41
SRSF6-201ENST00000244020 CR1P17927 2039 aa6.27□□□□□ -1.41
SRSF6-201ENST00000244020 KPRPQ5T749 579 aaPredicted RBP6.26□□□□□ -1.41
SRSF6-201ENST00000244020 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
SRSF6-201ENST00000244020 IGLV6-57P01721 117 aa6.26□□□□□ -1.41
SRSF6-201ENST00000244020 C19orf73Q9NVV2 129 aa6.26□□□□□ -1.41
SRSF6-201ENST00000244020 FP248Q71RG6 208 aaPredicted RBP6.25□□□□□ -1.41
SRSF6-201ENST00000244020 A0A1B0GU69 56 aa6.25□□□□□ -1.41
SRSF6-201ENST00000244020 C9orf66Q5T8R8 295 aa6.25□□□□□ -1.41
SRSF6-201ENST00000244020 RBM12B-AS1Q9P1G2 102 aa6.23□□□□□ -1.41
SRSF6-201ENST00000244020 X6R8D5 127 aa6.23□□□□□ -1.41
SRSF6-201ENST00000244020 OXLD1Q5BKU9 147 aa6.23□□□□□ -1.41
SRSF6-201ENST00000244020 TRBV7-4A0A0J9YYF1 115 aa6.22□□□□□ -1.41
SRSF6-201ENST00000244020 APCP25054 2843 aa6.22□□□□□ -1.41
SRSF6-201ENST00000244020 LCA10Q71F78 164 aa6.22□□□□□ -1.41
SRSF6-201ENST00000244020 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
SRSF6-201ENST00000244020 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.41
SRSF6-201ENST00000244020 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.41
SRSF6-201ENST00000244020 C6orf48Q9UBA6 75 aa6.21□□□□□ -1.42
SRSF6-201ENST00000244020 EPM2AB3EWF7 344 aa6.21□□□□□ -1.42
SRSF6-201ENST00000244020 ELOF1P60002 83 aaKnown RBP6.2□□□□□ -1.42
SRSF6-201ENST00000244020 LINC00612Q8N6U2 182 aa6.19□□□□□ -1.42
SRSF6-201ENST00000244020 LELP1Q5T871 98 aa6.19□□□□□ -1.42
SRSF6-201ENST00000244020 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
SRSF6-201ENST00000244020 FLNAP21333 2647 aaKnown RBP6.18□□□□□ -1.42
SRSF6-201ENST00000244020 RPL37AP61513 92 aaKnown RBP6.18□□□□□ -1.42
SRSF6-201ENST00000244020 ITPR2Q14571 2701 aa6.17□□□□□ -1.42
SRSF6-201ENST00000244020 ITPR3Q14573 2671 aa6.17□□□□□ -1.42
SRSF6-201ENST00000244020 LOC101927531A0A1B0GV80 90 aa6.17□□□□□ -1.42
SRSF6-201ENST00000244020 EGFEM1PQ0D2K5 195 aa6.17□□□□□ -1.42
SRSF6-201ENST00000244020 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
SRSF6-201ENST00000244020 FAM229BQ4G0N7 80 aa6.17□□□□□ -1.42
SRSF6-201ENST00000244020 PRLHP81277 87 aa6.16□□□□□ -1.42
SRSF6-201ENST00000244020 SSBP3-AS1Q7Z2R9 100 aa6.16□□□□□ -1.42
SRSF6-201ENST00000244020 COA5Q86WW8 74 aa6.16□□□□□ -1.42
SRSF6-201ENST00000244020 Q9BRP9 147 aa6.16□□□□□ -1.42
SRSF6-201ENST00000244020 MGAM2Q2M2H8 2515 aa6.15□□□□□ -1.42
SRSF6-201ENST00000244020 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
SRSF6-201ENST00000244020 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.43
SRSF6-201ENST00000244020 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.43
SRSF6-201ENST00000244020 PRR15Q8IV56 129 aa6.15□□□□□ -1.43
SRSF6-201ENST00000244020 Q6ZRU5 148 aa6.14□□□□□ -1.43
SRSF6-201ENST00000244020 OCR1Q9BZK8 76 aa6.14□□□□□ -1.43
SRSF6-201ENST00000244020 K7EQZ3 153 aa6.14□□□□□ -1.43
SRSF6-201ENST00000244020 Q6ZTC4 211 aa6.14□□□□□ -1.43
SRSF6-201ENST00000244020 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
SRSF6-201ENST00000244020 IGKV2-30P06310 120 aa6.13□□□□□ -1.43
SRSF6-201ENST00000244020 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
SRSF6-201ENST00000244020 MAST4O15021 2626 aa6.13□□□□□ -1.43
SRSF6-201ENST00000244020 C11orf45Q8TAV5 145 aa6.13□□□□□ -1.43
SRSF6-201ENST00000244020 PRAC1Q96KF2 57 aa6.13□□□□□ -1.43
SRSF6-201ENST00000244020 PRR34Q9NV39 138 aa6.12□□□□□ -1.43
SRSF6-201ENST00000244020 TEP1Q99973 2627 aaKnown RBP6.11□□□□□ -1.43
SRSF6-201ENST00000244020 REG3GQ6UW15 175 aa6.11□□□□□ -1.43
SRSF6-201ENST00000244020 NBPF19A0A087WUL8 3843 aa6.11□□□□□ -1.43
SRSF6-201ENST00000244020 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
SRSF6-201ENST00000244020 Q8NBF4 154 aa6.1□□□□□ -1.43
SRSF6-201ENST00000244020 ST20-AS1Q8NBB2 130 aa6.1□□□□□ -1.43
SRSF6-201ENST00000244020 ACYP2P14621 99 aa6.09□□□□□ -1.43
SRSF6-201ENST00000244020 NOTCH1P46531 2555 aa6.09□□□□□ -1.43
SRSF6-201ENST00000244020 AKAP9Q99996 3911 aa6.08□□□□□ -1.44
SRSF6-201ENST00000244020 Q6ZRP5 223 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms