RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 LINC00588Q9Y4M8 146 aa7.43□□□□□ -1.22
COPA-201ENST00000241704 KRTAP10-11P60412 298 aa7.43□□□□□ -1.22
COPA-201ENST00000241704 VCANP13611 3396 aa7.42□□□□□ -1.22
COPA-201ENST00000241704 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
COPA-201ENST00000241704 SMIM29Q86T20 159 aa7.41□□□□□ -1.22
COPA-201ENST00000241704 PRLHP81277 87 aa7.4□□□□□ -1.22
COPA-201ENST00000241704 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.22
COPA-201ENST00000241704 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
COPA-201ENST00000241704 EPM2AB3EWF7 344 aa7.39□□□□□ -1.23
COPA-201ENST00000241704 Q9BRP9 147 aa7.38□□□□□ -1.23
COPA-201ENST00000241704 TNRC18O15417 2968 aaPredicted RBP7.38□□□□□ -1.23
COPA-201ENST00000241704 NOTCH1P46531 2555 aa7.38□□□□□ -1.23
COPA-201ENST00000241704 RTL8CO15255 209 aa7.38□□□□□ -1.23
COPA-201ENST00000241704 FAM229BQ4G0N7 80 aa7.37□□□□□ -1.23
COPA-201ENST00000241704 C6orf48Q9UBA6 75 aa7.37□□□□□ -1.23
COPA-201ENST00000241704 MAP1AP78559 2803 aaPredicted RBP7.37□□□□□ -1.23
COPA-201ENST00000241704 C1orf64Q8NEQ6 169 aa7.37□□□□□ -1.23
COPA-201ENST00000241704 LINC00612Q8N6U2 182 aa7.37□□□□□ -1.23
COPA-201ENST00000241704 A8MUN3 132 aa7.36□□□□□ -1.23
COPA-201ENST00000241704 hDV103S1A0JD37 113 aa7.36□□□□□ -1.23
COPA-201ENST00000241704 GCN1Q92616 2671 aaKnown RBP7.36□□□□□ -1.23
COPA-201ENST00000241704 COL6A3P12111 3177 aa7.35□□□□□ -1.23
COPA-201ENST00000241704 TRAV22A0A0B4J277 110 aa7.35□□□□□ -1.23
COPA-201ENST00000241704 LINC00208Q96KT6 92 aa7.35□□□□□ -1.23
COPA-201ENST00000241704 Q1T7F1 81 aa7.34□□□□□ -1.23
COPA-201ENST00000241704 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
COPA-201ENST00000241704 DNAH10OSP0CZ25 163 aa7.33□□□□□ -1.24
COPA-201ENST00000241704 KTN1-AS1Q86SY8 53 aa7.33□□□□□ -1.24
COPA-201ENST00000241704 A0A087WSZ3 146 aa7.32□□□□□ -1.24
COPA-201ENST00000241704 CR1P17927 2039 aa7.31□□□□□ -1.24
COPA-201ENST00000241704 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
COPA-201ENST00000241704 HCG22E2RYF7 251 aa7.31□□□□□ -1.24
COPA-201ENST00000241704 IGLV6-57P01721 117 aa7.31□□□□□ -1.24
COPA-201ENST00000241704 OCR1Q9BZK8 76 aa7.31□□□□□ -1.24
COPA-201ENST00000241704 CELSR3Q9NYQ7 3312 aa7.3□□□□□ -1.24
COPA-201ENST00000241704 GVQW2A0A096LPI5 108 aaPredicted RBP7.3□□□□□ -1.24
COPA-201ENST00000241704 Q6ZRP5 223 aa7.3□□□□□ -1.24
COPA-201ENST00000241704 A0A1B0GW54 56 aa7.29□□□□□ -1.24
COPA-201ENST00000241704 FRYQ5TBA9 3013 aa7.29□□□□□ -1.24
COPA-201ENST00000241704 IGHV6-1A0A0B4J1U7 121 aa7.29□□□□□ -1.24
COPA-201ENST00000241704 PHF5AQ7RTV0 110 aaKnown RBP7.28□□□□□ -1.24
COPA-201ENST00000241704 FLNCQ14315 2725 aa7.28□□□□□ -1.24
COPA-201ENST00000241704 SPTBN5Q9NRC6 3674 aaKnown RBP7.28□□□□□ -1.24
COPA-201ENST00000241704 PRR34Q9NV39 138 aa7.28□□□□□ -1.24
COPA-201ENST00000241704 CHTF8P0CG12 524 aa7.28□□□□□ -1.24
COPA-201ENST00000241704 UBR5O95071 2799 aaPredicted RBP7.27□□□□□ -1.25
COPA-201ENST00000241704 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
COPA-201ENST00000241704 J3QL48 77 aa7.27□□□□□ -1.25
COPA-201ENST00000241704 PLA2G1BP04054 148 aaKnown RBP7.27□□□□□ -1.25
COPA-201ENST00000241704 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
COPA-201ENST00000241704 SPACA4Q8TDM5 124 aa7.26□□□□□ -1.25
COPA-201ENST00000241704 H0Y9P7 68 aa7.26□□□□□ -1.25
COPA-201ENST00000241704 FRYLO94915 3013 aa7.25□□□□□ -1.25
COPA-201ENST00000241704 REV3LO60673 3130 aa7.25□□□□□ -1.25
COPA-201ENST00000241704 MOBPQ13875 183 aa7.25□□□□□ -1.25
COPA-201ENST00000241704 KIAA0087Q14695 138 aa7.24□□□□□ -1.25
COPA-201ENST00000241704 DMXL2Q8TDJ6 3036 aa7.23□□□□□ -1.25
COPA-201ENST00000241704 RBM12B-AS1Q9P1G2 102 aa7.23□□□□□ -1.25
COPA-201ENST00000241704 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
COPA-201ENST00000241704 ATMQ13315 3056 aa7.22□□□□□ -1.25
COPA-201ENST00000241704 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
COPA-201ENST00000241704 BOD1L1Q8NFC6 3051 aa7.22□□□□□ -1.25
COPA-201ENST00000241704 VPREB1P12018 145 aa7.21□□□□□ -1.26
COPA-201ENST00000241704 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.26
COPA-201ENST00000241704 Q8NBF4 154 aa7.2□□□□□ -1.26
COPA-201ENST00000241704 SPEGQ15772 3267 aa7.2□□□□□ -1.26
COPA-201ENST00000241704 H3BPC8 53 aa7.2□□□□□ -1.26
COPA-201ENST00000241704 RETNLBQ9BQ08 111 aa7.2□□□□□ -1.26
COPA-201ENST00000241704 C7orf65Q6ZTY9 151 aa7.19□□□□□ -1.26
COPA-201ENST00000241704 EYSQ5T1H1 3165 aa7.19□□□□□ -1.26
COPA-201ENST00000241704 A0A087WTM6 91 aa7.19□□□□□ -1.26
COPA-201ENST00000241704 Q6ZRX8 168 aa7.19□□□□□ -1.26
COPA-201ENST00000241704 LINC00528Q8N1L1 170 aa7.18□□□□□ -1.26
COPA-201ENST00000241704 K7EQZ3 153 aa7.18□□□□□ -1.26
COPA-201ENST00000241704 ADGRG4Q8IZF6 3080 aa7.18□□□□□ -1.26
COPA-201ENST00000241704 C15orf56Q8N910 161 aa7.17□□□□□ -1.26
COPA-201ENST00000241704 APLNQ9ULZ1 77 aa7.17□□□□□ -1.26
COPA-201ENST00000241704 NSD1Q96L73 2696 aaPredicted RBP7.16□□□□□ -1.26
COPA-201ENST00000241704 SMR3BP02814 79 aaPredicted RBP7.16□□□□□ -1.26
COPA-201ENST00000241704 FREM2Q5SZK8 3169 aa7.16□□□□□ -1.26
COPA-201ENST00000241704 LCA10Q71F78 164 aa7.15□□□□□ -1.26
COPA-201ENST00000241704 COL12A1Q99715 3063 aa7.15□□□□□ -1.27
COPA-201ENST00000241704 LOC101927531A0A1B0GV80 90 aa7.15□□□□□ -1.27
COPA-201ENST00000241704 PCOTHQ58A44 107 aa7.14□□□□□ -1.27
COPA-201ENST00000241704 ST20-AS1Q8NBB2 130 aa7.14□□□□□ -1.27
COPA-201ENST00000241704 USP34Q70CQ2 3546 aa7.14□□□□□ -1.27
COPA-201ENST00000241704 SPAG11AQ6PDA7 123 aa7.13□□□□□ -1.27
COPA-201ENST00000241704 FAM168BA1KXE4 195 aa7.13□□□□□ -1.27
COPA-201ENST00000241704 C9orf163Q8N9P6 203 aa7.13□□□□□ -1.27
COPA-201ENST00000241704 SERTAD4-AS1Q5TG53 156 aa7.13□□□□□ -1.27
COPA-201ENST00000241704 K7ERS5 55 aa7.13□□□□□ -1.27
COPA-201ENST00000241704 COA5Q86WW8 74 aa7.12□□□□□ -1.27
COPA-201ENST00000241704 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
COPA-201ENST00000241704 Q5VV11 94 aa7.12□□□□□ -1.27
COPA-201ENST00000241704 LINC00476Q8WZB0 136 aa7.12□□□□□ -1.27
COPA-201ENST00000241704 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
COPA-201ENST00000241704 CDC42SE1Q9NRR8 79 aa7.12□□□□□ -1.27
COPA-201ENST00000241704 IGLV1-50A0A075B6I6 118 aa7.11□□□□□ -1.27
COPA-201ENST00000241704 Q8NDZ9 215 aa7.11□□□□□ -1.27
COPA-201ENST00000241704 DMXL1Q9Y485 3027 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms