RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 LINC00846Q9NV44 126 aa5.19□□□□□ -1.58
CXCR4-201ENST00000241393 TEP1Q99973 2627 aaKnown RBP5.18□□□□□ -1.58
CXCR4-201ENST00000241393 ATRQ13535 2644 aa5.18□□□□□ -1.58
CXCR4-201ENST00000241393 LOC110117498A0A087WWA1 95 aa5.18□□□□□ -1.58
CXCR4-201ENST00000241393 ATOX1O00244 68 aa5.18□□□□□ -1.58
CXCR4-201ENST00000241393 PDE6GP18545 87 aa5.18□□□□□ -1.58
CXCR4-201ENST00000241393 RPL18AQ02543 176 aaKnown RBP5.18□□□□□ -1.58
CXCR4-201ENST00000241393 LINC01556Q5JQF7 62 aa5.18□□□□□ -1.58
CXCR4-201ENST00000241393 WFDC10BQ8IUB3 73 aa5.18□□□□□ -1.58
CXCR4-201ENST00000241393 DIRC1Q969H9 104 aa5.18□□□□□ -1.58
CXCR4-201ENST00000241393 TRAV23DV6A0A075B6W5 121 aa5.17□□□□□ -1.58
CXCR4-201ENST00000241393 UQCRQO14949 82 aa5.17□□□□□ -1.58
CXCR4-201ENST00000241393 Q6ZVQ6 151 aa5.17□□□□□ -1.58
CXCR4-201ENST00000241393 CAMK2N2Q96S95 79 aa5.17□□□□□ -1.58
CXCR4-201ENST00000241393 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
CXCR4-201ENST00000241393 TRBV10-3A0A0K0K1G6 114 aa5.16□□□□□ -1.58
CXCR4-201ENST00000241393 RBM3P98179 157 aaKnown RBP5.16□□□□□ -1.58
CXCR4-201ENST00000241393 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.16□□□□□ -1.58
CXCR4-201ENST00000241393 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
CXCR4-201ENST00000241393 LINC00526Q96FQ7 95 aa5.16□□□□□ -1.58
CXCR4-201ENST00000241393 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.58
CXCR4-201ENST00000241393 M0R378 163 aa5.15□□□□□ -1.58
CXCR4-201ENST00000241393 C15orf56Q8N910 161 aa5.15□□□□□ -1.58
CXCR4-201ENST00000241393 RETNQ9HD89 108 aa5.15□□□□□ -1.58
CXCR4-201ENST00000241393 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
CXCR4-201ENST00000241393 ZNF73O43830 326 aaPredicted RBP5.15□□□□□ -1.59
CXCR4-201ENST00000241393 COX7CP15954 63 aa5.15□□□□□ -1.59
CXCR4-201ENST00000241393 COX7BP24311 80 aa5.15□□□□□ -1.59
CXCR4-201ENST00000241393 ELOF1P60002 83 aaKnown RBP5.15□□□□□ -1.59
CXCR4-201ENST00000241393 ESRGQ1W209 222 aa5.15□□□□□ -1.59
CXCR4-201ENST00000241393 Q6ZQT0 140 aa5.15□□□□□ -1.59
CXCR4-201ENST00000241393 UBL5Q9BZL1 73 aa5.15□□□□□ -1.59
CXCR4-201ENST00000241393 A0A087X002 238 aa5.14□□□□□ -1.59
CXCR4-201ENST00000241393 DEFB131BA0A096LNP1 70 aa5.14□□□□□ -1.59
CXCR4-201ENST00000241393 DNAH10OSP0CZ25 163 aa5.14□□□□□ -1.59
CXCR4-201ENST00000241393 Q6ZRU5 148 aa5.14□□□□□ -1.59
CXCR4-201ENST00000241393 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
CXCR4-201ENST00000241393 SS18L2Q9UHA2 77 aa5.14□□□□□ -1.59
CXCR4-201ENST00000241393 IGKV3D-7A0A0C4DH55 119 aa5.13□□□□□ -1.59
CXCR4-201ENST00000241393 HIGD2BQ4VC39 106 aa5.13□□□□□ -1.59
CXCR4-201ENST00000241393 Q6ZQY7 126 aa5.13□□□□□ -1.59
CXCR4-201ENST00000241393 C11orf45Q8TAV5 145 aa5.13□□□□□ -1.59
CXCR4-201ENST00000241393 LAMTOR3Q9UHA4 124 aa5.13□□□□□ -1.59
CXCR4-201ENST00000241393 C9orf153Q5TBE3 101 aa5.12□□□□□ -1.59
CXCR4-201ENST00000241393 Q6ZRP5 223 aa5.12□□□□□ -1.59
CXCR4-201ENST00000241393 C3orf56Q8N813 242 aa5.12□□□□□ -1.59
CXCR4-201ENST00000241393 DSCR8Q96T75 97 aa5.12□□□□□ -1.59
CXCR4-201ENST00000241393 TLX1NBP0CAT3 122 aa5.12□□□□□ -1.59
CXCR4-201ENST00000241393 CRYGAP11844 174 aa5.12□□□□□ -1.59
CXCR4-201ENST00000241393 SYCNQ0VAF6 134 aa5.12□□□□□ -1.59
CXCR4-201ENST00000241393 TRAV10A0A0B4J240 114 aa5.11□□□□□ -1.59
CXCR4-201ENST00000241393 TRBV7-4A0A0J9YYF1 115 aa5.11□□□□□ -1.59
CXCR4-201ENST00000241393 BCE1O60756 84 aa5.11□□□□□ -1.59
CXCR4-201ENST00000241393 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
CXCR4-201ENST00000241393 IGKV2D-24A0A075B6R9 120 aa5.1□□□□□ -1.59
CXCR4-201ENST00000241393 CXCL6P80162 114 aa5.08□□□□□ -1.6
CXCR4-201ENST00000241393 RMI2Q96E14 147 aa5.08□□□□□ -1.6
CXCR4-201ENST00000241393 KCNQ1DNQ9H478 68 aa5.08□□□□□ -1.6
CXCR4-201ENST00000241393 BAHCC1Q9P281 2608 aa5.08□□□□□ -1.6
CXCR4-201ENST00000241393 TRRAPQ9Y4A5 3859 aa5.08□□□□□ -1.6
CXCR4-201ENST00000241393 A0A087WVE0 104 aa5.08□□□□□ -1.6
CXCR4-201ENST00000241393 NKAPP1Q8N9T2 125 aa5.07□□□□□ -1.6
CXCR4-201ENST00000241393 MRAPQ8TCY5 172 aa5.07□□□□□ -1.6
CXCR4-201ENST00000241393 TM2D3Q9BRN9 247 aa5.07□□□□□ -1.6
CXCR4-201ENST00000241393 UPK3BQ9BT76 320 aa5.06□□□□□ -1.6
CXCR4-201ENST00000241393 SMIM20Q8N5G0 67 aa5.05□□□□□ -1.6
CXCR4-201ENST00000241393 LINC00588Q9Y4M8 146 aa5.05□□□□□ -1.6
CXCR4-201ENST00000241393 STAB1Q9NY15 2570 aa5.05□□□□□ -1.6
CXCR4-201ENST00000241393 A0A1B0GW54 56 aa5.05□□□□□ -1.6
CXCR4-201ENST00000241393 FAM19A1Q7Z5A9 133 aa5.05□□□□□ -1.6
CXCR4-201ENST00000241393 C7orf33Q8WU49 177 aa5.05□□□□□ -1.6
CXCR4-201ENST00000241393 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
CXCR4-201ENST00000241393 MAST4O15021 2626 aa5.04□□□□□ -1.6
CXCR4-201ENST00000241393 M0R2N4 97 aa5.04□□□□□ -1.6
CXCR4-201ENST00000241393 SPRR1AP35321 89 aa5.04□□□□□ -1.6
CXCR4-201ENST00000241393 TMEM258P61165 79 aa5.04□□□□□ -1.6
CXCR4-201ENST00000241393 Q8NBF4 154 aa5.04□□□□□ -1.6
CXCR4-201ENST00000241393 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
CXCR4-201ENST00000241393 HAMPP81172 84 aa5.02□□□□□ -1.61
CXCR4-201ENST00000241393 Q6ZRX8 168 aa5.02□□□□□ -1.61
CXCR4-201ENST00000241393 IGLV1-50A0A075B6I6 118 aa5.02□□□□□ -1.61
CXCR4-201ENST00000241393 IGLV5-48A0A075B6I7 105 aa5.02□□□□□ -1.61
CXCR4-201ENST00000241393 TRAV7A0A075B6U4 112 aa5.02□□□□□ -1.61
CXCR4-201ENST00000241393 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
CXCR4-201ENST00000241393 TENM3Q9P273 2699 aa5.01□□□□□ -1.61
CXCR4-201ENST00000241393 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
CXCR4-201ENST00000241393 LOC107984640A0A0U1RRK4 108 aa5.01□□□□□ -1.61
CXCR4-201ENST00000241393 ETDCA0A1B0GVM5 59 aa5□□□□□ -1.61
CXCR4-201ENST00000241393 K7EIL1 84 aa5□□□□□ -1.61
CXCR4-201ENST00000241393 Q8N377 158 aa5□□□□□ -1.61
CXCR4-201ENST00000241393 OCR1Q9BZK8 76 aa5□□□□□ -1.61
CXCR4-201ENST00000241393 COL6A5A8TX70 2615 aa5□□□□□ -1.61
CXCR4-201ENST00000241393 FBN1P35555 2871 aaKnown RBP4.99□□□□□ -1.61
CXCR4-201ENST00000241393 J3KT08 172 aa4.99□□□□□ -1.61
CXCR4-201ENST00000241393 C14orf177Q52M58 125 aa4.99□□□□□ -1.61
CXCR4-201ENST00000241393 CASC10Q5T4H9 136 aa4.99□□□□□ -1.61
CXCR4-201ENST00000241393 MRPL55Q7Z7F7 128 aaKnown RBP4.99□□□□□ -1.61
CXCR4-201ENST00000241393 NREPQ16612 68 aa4.98□□□□□ -1.61
CXCR4-201ENST00000241393 PKD1L1Q8TDX9 2849 aa4.97□□□□□ -1.61
CXCR4-201ENST00000241393 FUSP35637 526 aaKnown RBP eCLIP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms