RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 GVQW2A0A096LPI5 108 aaPredicted RBP4.64□□□□□ -1.67
CSMD2-201ENST00000241312 LINC00315P59091 139 aa4.64□□□□□ -1.67
CSMD2-201ENST00000241312 LINC00476Q8WZB0 136 aa4.63□□□□□ -1.67
CSMD2-201ENST00000241312 FAM229AH3BQW9 127 aa4.63□□□□□ -1.67
CSMD2-201ENST00000241312 A0A1W2PPR1 153 aa4.63□□□□□ -1.67
CSMD2-201ENST00000241312 A8MWP4 228 aa4.63□□□□□ -1.67
CSMD2-201ENST00000241312 C16orf90A8MZG2 172 aa4.63□□□□□ -1.67
CSMD2-201ENST00000241312 CYP4F30PQ9H0H9 118 aa4.62□□□□□ -1.67
CSMD2-201ENST00000241312 MDFIQ99750 246 aa4.62□□□□□ -1.67
CSMD2-201ENST00000241312 LINC00313P59037 77 aa4.61□□□□□ -1.67
CSMD2-201ENST00000241312 LINC01600Q96MT4 127 aa4.61□□□□□ -1.67
CSMD2-201ENST00000241312 Q6ZRP5 223 aa4.61□□□□□ -1.67
CSMD2-201ENST00000241312 IGLV8-61A0A075B6I0 122 aa4.61□□□□□ -1.67
CSMD2-201ENST00000241312 IGLV6-57P01721 117 aa4.61□□□□□ -1.67
CSMD2-201ENST00000241312 CFAP54Q96N23 3096 aa4.61□□□□□ -1.67
CSMD2-201ENST00000241312 SSBP3-AS1Q7Z2R9 100 aa4.6□□□□□ -1.67
CSMD2-201ENST00000241312 UQCR11O14957 56 aa4.6□□□□□ -1.67
CSMD2-201ENST00000241312 CHD9Q3L8U1 2897 aa4.6□□□□□ -1.67
CSMD2-201ENST00000241312 COA5Q86WW8 74 aa4.59□□□□□ -1.67
CSMD2-201ENST00000241312 APCP25054 2843 aa4.59□□□□□ -1.67
CSMD2-201ENST00000241312 ITPR1Q14643 2758 aa4.59□□□□□ -1.67
CSMD2-201ENST00000241312 LITAFQ99732 161 aa4.59□□□□□ -1.68
CSMD2-201ENST00000241312 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
CSMD2-201ENST00000241312 ST20-AS1Q8NBB2 130 aa4.58□□□□□ -1.68
CSMD2-201ENST00000241312 C5orf42Q9H799 3197 aa4.58□□□□□ -1.68
CSMD2-201ENST00000241312 RTL8CO15255 209 aa4.57□□□□□ -1.68
CSMD2-201ENST00000241312 NBDYA0A0U1RRE5 68 aa4.57□□□□□ -1.68
CSMD2-201ENST00000241312 CRIPTQ9P021 101 aa4.57□□□□□ -1.68
CSMD2-201ENST00000241312 DNAH10OSP0CZ25 163 aa4.56□□□□□ -1.68
CSMD2-201ENST00000241312 K7EQZ3 153 aa4.56□□□□□ -1.68
CSMD2-201ENST00000241312 TYMSOSQ8TAI1 123 aa4.56□□□□□ -1.68
CSMD2-201ENST00000241312 RPL37AP61513 92 aaKnown RBP4.56□□□□□ -1.68
CSMD2-201ENST00000241312 CHTF8P0CG12 524 aa4.55□□□□□ -1.68
CSMD2-201ENST00000241312 CD164Q04900 197 aa4.55□□□□□ -1.68
CSMD2-201ENST00000241312 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
CSMD2-201ENST00000241312 Q8NAQ8 132 aa4.55□□□□□ -1.68
CSMD2-201ENST00000241312 Q96NJ1 140 aa4.55□□□□□ -1.68
CSMD2-201ENST00000241312 H3BS24 57 aa4.55□□□□□ -1.68
CSMD2-201ENST00000241312 PHF5AQ7RTV0 110 aaKnown RBP4.54□□□□□ -1.68
CSMD2-201ENST00000241312 A8MUN3 132 aa4.54□□□□□ -1.68
CSMD2-201ENST00000241312 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
CSMD2-201ENST00000241312 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
CSMD2-201ENST00000241312 PCNTO95613 3336 aa4.53□□□□□ -1.68
CSMD2-201ENST00000241312 PRR15Q8IV56 129 aa4.53□□□□□ -1.68
CSMD2-201ENST00000241312 MRPL34Q9BQ48 92 aaKnown RBP4.53□□□□□ -1.68
CSMD2-201ENST00000241312 HIVEP1P15822 2718 aa4.53□□□□□ -1.68
CSMD2-201ENST00000241312 LINC00588Q9Y4M8 146 aa4.53□□□□□ -1.68
CSMD2-201ENST00000241312 LINC00528Q8N1L1 170 aa4.52□□□□□ -1.69
CSMD2-201ENST00000241312 FAM168BA1KXE4 195 aa4.52□□□□□ -1.69
CSMD2-201ENST00000241312 KLK9Q2XQG4 91 aa4.51□□□□□ -1.69
CSMD2-201ENST00000241312 NIPBLQ6KC79 2804 aaeCLIP4.51□□□□□ -1.69
CSMD2-201ENST00000241312 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
CSMD2-201ENST00000241312 A0A1B0GVX0 72 aa4.51□□□□□ -1.69
CSMD2-201ENST00000241312 H7BZZ5 65 aa4.51□□□□□ -1.69
CSMD2-201ENST00000241312 SPANXA2-OT1Q8N9U9 137 aa4.5□□□□□ -1.69
CSMD2-201ENST00000241312 C8orf17Q9NRJ1 99 aa4.5□□□□□ -1.69
CSMD2-201ENST00000241312 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
CSMD2-201ENST00000241312 LINC00304Q8N9R0 145 aa4.49□□□□□ -1.69
CSMD2-201ENST00000241312 IGLV1-50A0A075B6I6 118 aa4.49□□□□□ -1.69
CSMD2-201ENST00000241312 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
CSMD2-201ENST00000241312 LINC00336Q6ZUF6 198 aa4.48□□□□□ -1.69
CSMD2-201ENST00000241312 COX6B2Q6YFQ2 88 aa4.48□□□□□ -1.69
CSMD2-201ENST00000241312 OBSCN-AS1Q96MR7 158 aa4.48□□□□□ -1.69
CSMD2-201ENST00000241312 TENM3Q9P273 2699 aa4.47□□□□□ -1.69
CSMD2-201ENST00000241312 LAMA2P24043 3122 aaKnown RBP4.47□□□□□ -1.69
CSMD2-201ENST00000241312 PRR34Q9NV39 138 aa4.47□□□□□ -1.69
CSMD2-201ENST00000241312 CHD7Q9P2D1 2997 aa4.46□□□□□ -1.69
CSMD2-201ENST00000241312 FRYLO94915 3013 aa4.46□□□□□ -1.7
CSMD2-201ENST00000241312 A0A0G2JQZ4 141 aa4.46□□□□□ -1.7
CSMD2-201ENST00000241312 A0A1W2PNN7 141 aa4.46□□□□□ -1.7
CSMD2-201ENST00000241312 LCA10Q71F78 164 aa4.46□□□□□ -1.7
CSMD2-201ENST00000241312 CSNK1G2-AS1Q8NCQ2 148 aa4.46□□□□□ -1.7
CSMD2-201ENST00000241312 C15orf56Q8N910 161 aa4.46□□□□□ -1.7
CSMD2-201ENST00000241312 DSCR10P59022 87 aa4.45□□□□□ -1.7
CSMD2-201ENST00000241312 EIF4EBP3O60516 100 aaPredicted RBP4.45□□□□□ -1.7
CSMD2-201ENST00000241312 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
CSMD2-201ENST00000241312 ZNF861PO60384 105 aa4.44□□□□□ -1.7
CSMD2-201ENST00000241312 NF1P21359 2839 aa4.44□□□□□ -1.7
CSMD2-201ENST00000241312 KALRNO60229 2985 aa4.43□□□□□ -1.7
CSMD2-201ENST00000241312 PLA2G2DQ9UNK4 145 aa4.43□□□□□ -1.7
CSMD2-201ENST00000241312 TLX1NBP0CAT3 122 aa4.43□□□□□ -1.7
CSMD2-201ENST00000241312 FAM104AQ969W3 186 aa4.42□□□□□ -1.7
CSMD2-201ENST00000241312 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
CSMD2-201ENST00000241312 Q1T7F1 81 aa4.42□□□□□ -1.7
CSMD2-201ENST00000241312 Q8N377 158 aa4.42□□□□□ -1.7
CSMD2-201ENST00000241312 LRBAP50851 2863 aa4.42□□□□□ -1.7
CSMD2-201ENST00000241312 MGAQ8IWI9 3026 aa4.42□□□□□ -1.7
CSMD2-201ENST00000241312 J3QL48 77 aa4.41□□□□□ -1.7
CSMD2-201ENST00000241312 WWC2-AS2Q96NR7 200 aa4.41□□□□□ -1.7
CSMD2-201ENST00000241312 KRTAP24-1Q3LI83 254 aa4.41□□□□□ -1.7
CSMD2-201ENST00000241312 LINC00612Q8N6U2 182 aa4.4□□□□□ -1.7
CSMD2-201ENST00000241312 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
CSMD2-201ENST00000241312 SPRR4Q96PI1 79 aa4.39□□□□□ -1.71
CSMD2-201ENST00000241312 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
CSMD2-201ENST00000241312 A0A0D9SG42 100 aa4.39□□□□□ -1.71
CSMD2-201ENST00000241312 IGLV5-48A0A075B6I7 105 aa4.38□□□□□ -1.71
CSMD2-201ENST00000241312 RBM12B-AS1Q9P1G2 102 aa4.38□□□□□ -1.71
CSMD2-201ENST00000241312 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
CSMD2-201ENST00000241312 TRIOO75962 3097 aa4.37□□□□□ -1.71
CSMD2-201ENST00000241312 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms