RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
MED28-201ENST00000237380 PRO0461Q9UI25 63 aa4.98□□□□□ -1.61
MED28-201ENST00000237380 A8MTW9 85 aa4.97□□□□□ -1.61
MED28-201ENST00000237380 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
MED28-201ENST00000237380 M0R2T5 61 aa4.97□□□□□ -1.61
MED28-201ENST00000237380 USP24Q9UPU5 2620 aa4.97□□□□□ -1.61
MED28-201ENST00000237380 APLNQ9ULZ1 77 aa4.97□□□□□ -1.61
MED28-201ENST00000237380 KMT2BQ9UMN6 2715 aaPredicted RBP4.97□□□□□ -1.61
MED28-201ENST00000237380 GAS8-AS1O95177 125 aa4.96□□□□□ -1.61
MED28-201ENST00000237380 ZNF575Q86XF7 245 aa4.95□□□□□ -1.62
MED28-201ENST00000237380 OBSCN-AS1Q96MR7 158 aa4.95□□□□□ -1.62
MED28-201ENST00000237380 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
MED28-201ENST00000237380 A0A087WVE0 104 aa4.94□□□□□ -1.62
MED28-201ENST00000237380 PRR15Q8IV56 129 aa4.94□□□□□ -1.62
MED28-201ENST00000237380 FAM229BQ4G0N7 80 aa4.94□□□□□ -1.62
MED28-201ENST00000237380 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
MED28-201ENST00000237380 PRR34Q9NV39 138 aa4.93□□□□□ -1.62
MED28-201ENST00000237380 FLNBO75369 2602 aaKnown RBP4.93□□□□□ -1.62
MED28-201ENST00000237380 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
MED28-201ENST00000237380 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
MED28-201ENST00000237380 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
MED28-201ENST00000237380 CSNK1G2-AS1Q8NCQ2 148 aa4.91□□□□□ -1.62
MED28-201ENST00000237380 CENPEQ02224 2701 aa4.91□□□□□ -1.62
MED28-201ENST00000237380 FAM104AQ969W3 186 aa4.9□□□□□ -1.62
MED28-201ENST00000237380 FLNAP21333 2647 aaKnown RBP4.9□□□□□ -1.63
MED28-201ENST00000237380 IGLV7-46A0A075B6I9 117 aa4.9□□□□□ -1.63
MED28-201ENST00000237380 C9orf92A6NGG3 77 aa4.9□□□□□ -1.63
MED28-201ENST00000237380 COA5Q86WW8 74 aa4.9□□□□□ -1.63
MED28-201ENST00000237380 OXTP01178 125 aa4.89□□□□□ -1.63
MED28-201ENST00000237380 KRTAP10-11P60412 298 aa4.89□□□□□ -1.63
MED28-201ENST00000237380 DSCR10P59022 87 aa4.89□□□□□ -1.63
MED28-201ENST00000237380 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
MED28-201ENST00000237380 Q9UF83 564 aa4.89□□□□□ -1.63
MED28-201ENST00000237380 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
MED28-201ENST00000237380 MAST4O15021 2626 aa4.88□□□□□ -1.63
MED28-201ENST00000237380 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
MED28-201ENST00000237380 IGLV8-61A0A075B6I0 122 aa4.88□□□□□ -1.63
MED28-201ENST00000237380 SPRR4Q96PI1 79 aa4.88□□□□□ -1.63
MED28-201ENST00000237380 SMCPP49901 116 aaPredicted RBP4.87□□□□□ -1.63
MED28-201ENST00000237380 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
MED28-201ENST00000237380 K7EQZ3 153 aa4.86□□□□□ -1.63
MED28-201ENST00000237380 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
MED28-201ENST00000237380 CASC10Q5T4H9 136 aa4.86□□□□□ -1.63
MED28-201ENST00000237380 ATRQ13535 2644 aa4.86□□□□□ -1.63
MED28-201ENST00000237380 LINC00612Q8N6U2 182 aa4.85□□□□□ -1.63
MED28-201ENST00000237380 KLKP1Q107X0 134 aa4.85□□□□□ -1.63
MED28-201ENST00000237380 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
MED28-201ENST00000237380 SMR3BP02814 79 aaPredicted RBP4.85□□□□□ -1.63
MED28-201ENST00000237380 MGAM2Q2M2H8 2515 aa4.84□□□□□ -1.63
MED28-201ENST00000237380 CSAG1Q6PB30 78 aa4.84□□□□□ -1.63
MED28-201ENST00000237380 TNP2Q05952 138 aa4.83□□□□□ -1.64
MED28-201ENST00000237380 LITAFQ99732 161 aa4.83□□□□□ -1.64
MED28-201ENST00000237380 Q8N377 158 aa4.8□□□□□ -1.64
MED28-201ENST00000237380 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
MED28-201ENST00000237380 CR1P17927 2039 aa4.79□□□□□ -1.64
MED28-201ENST00000237380 FAM218AQ96MZ4 157 aa4.79□□□□□ -1.64
MED28-201ENST00000237380 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
MED28-201ENST00000237380 S4R3F8 94 aa4.78□□□□□ -1.64
MED28-201ENST00000237380 DMAC1Q96GE9 116 aa4.78□□□□□ -1.64
MED28-201ENST00000237380 HECTD1Q9ULT8 2610 aa4.78□□□□□ -1.64
MED28-201ENST00000237380 ITPR3Q14573 2671 aa4.77□□□□□ -1.65
MED28-201ENST00000237380 WIPF1O43516 503 aa4.77□□□□□ -1.65
MED28-201ENST00000237380 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
MED28-201ENST00000237380 CENPFP49454 3210 aa4.77□□□□□ -1.65
MED28-201ENST00000237380 A0A096LNT2 108 aa4.76□□□□□ -1.65
MED28-201ENST00000237380 BPTFQ12830 3046 aa4.76□□□□□ -1.65
MED28-201ENST00000237380 GCN1Q92616 2671 aaKnown RBP4.76□□□□□ -1.65
MED28-201ENST00000237380 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
MED28-201ENST00000237380 ZNF292O60281 2723 aa4.76□□□□□ -1.65
MED28-201ENST00000237380 H7BZZ5 65 aa4.76□□□□□ -1.65
MED28-201ENST00000237380 Q1T7F1 81 aa4.76□□□□□ -1.65
MED28-201ENST00000237380 PLAC8Q9NZF1 115 aa4.75□□□□□ -1.65
MED28-201ENST00000237380 EP400Q96L91 3159 aa4.75□□□□□ -1.65
MED28-201ENST00000237380 NBEAL1Q6ZS30 2694 aa4.75□□□□□ -1.65
MED28-201ENST00000237380 UNC79Q9P2D8 2635 aa4.74□□□□□ -1.65
MED28-201ENST00000237380 AKAP13Q12802 2813 aa4.73□□□□□ -1.65
MED28-201ENST00000237380 CFAP46Q8IYW2 2715 aa4.72□□□□□ -1.65
MED28-201ENST00000237380 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
MED28-201ENST00000237380 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
MED28-201ENST00000237380 PRR26Q8N8Z3 221 aa4.72□□□□□ -1.65
MED28-201ENST00000237380 NOTCH1P46531 2555 aa4.72□□□□□ -1.65
MED28-201ENST00000237380 R4GN34 69 aa4.71□□□□□ -1.65
MED28-201ENST00000237380 A0A1B0GU33 70 aa4.71□□□□□ -1.66
MED28-201ENST00000237380 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
MED28-201ENST00000237380 A0A0D9SG42 100 aa4.71□□□□□ -1.66
MED28-201ENST00000237380 LCE6AA0A183 80 aa4.71□□□□□ -1.66
MED28-201ENST00000237380 LCA10Q71F78 164 aa4.7□□□□□ -1.66
MED28-201ENST00000237380 KRTAP10-3P60369 221 aa4.7□□□□□ -1.66
MED28-201ENST00000237380 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
MED28-201ENST00000237380 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
MED28-201ENST00000237380 Q5VSD8 79 aa4.69□□□□□ -1.66
MED28-201ENST00000237380 GIG44P09565 113 aaPredicted RBP4.68□□□□□ -1.66
MED28-201ENST00000237380 Q8N1X5 172 aa4.67□□□□□ -1.66
MED28-201ENST00000237380 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
MED28-201ENST00000237380 KRTAP1-3Q8IUG1 177 aa4.66□□□□□ -1.66
MED28-201ENST00000237380 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.65□□□□□ -1.67
MED28-201ENST00000237380 C4orf26Q17RF5 130 aa4.64□□□□□ -1.67
MED28-201ENST00000237380 KRTAP21-3Q3LHN1 58 aa4.64□□□□□ -1.67
MED28-201ENST00000237380 ANAPC11Q9NYG5 84 aa4.63□□□□□ -1.67
MED28-201ENST00000237380 COL6A5A8TX70 2615 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms