RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 C9orf129Q5T035 196 aaKnown RBP12.13□□□□□ -0.47
CLIP2-201ENST00000223398 CENPEQ02224 2701 aa12.13□□□□□ -0.47
CLIP2-201ENST00000223398 LOC110117498A0A087WWA1 95 aa12.13□□□□□ -0.47
CLIP2-201ENST00000223398 LINC00612Q8N6U2 182 aa12.12□□□□□ -0.47
CLIP2-201ENST00000223398 KCNQ1DNQ9H478 68 aa12.11□□□□□ -0.47
CLIP2-201ENST00000223398 EIF4EBP3O60516 100 aaPredicted RBP12.11□□□□□ -0.47
CLIP2-201ENST00000223398 LINC00304Q8N9R0 145 aa12.11□□□□□ -0.47
CLIP2-201ENST00000223398 C9orf92A6NGG3 77 aa12.1□□□□□ -0.47
CLIP2-201ENST00000223398 COX6B2Q6YFQ2 88 aa12.1□□□□□ -0.47
CLIP2-201ENST00000223398 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
CLIP2-201ENST00000223398 A0A0G2JQZ4 141 aa12.1□□□□□ -0.47
CLIP2-201ENST00000223398 A0A1W2PNN7 141 aa12.1□□□□□ -0.47
CLIP2-201ENST00000223398 ZNF861PO60384 105 aa12.1□□□□□ -0.47
CLIP2-201ENST00000223398 A0A1B0GW54 56 aa12.09□□□□□ -0.47
CLIP2-201ENST00000223398 ACYP2P14621 99 aa12.08□□□□□ -0.48
CLIP2-201ENST00000223398 TRBV7-4A0A0J9YYF1 115 aa12.07□□□□□ -0.48
CLIP2-201ENST00000223398 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
CLIP2-201ENST00000223398 TRAV22A0A0B4J277 110 aa12.06□□□□□ -0.48
CLIP2-201ENST00000223398 PMAIP1Q13794 54 aa12.06□□□□□ -0.48
CLIP2-201ENST00000223398 A0A1B0GU69 56 aa12.05□□□□□ -0.48
CLIP2-201ENST00000223398 DSCR10P59022 87 aa12.05□□□□□ -0.48
CLIP2-201ENST00000223398 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
CLIP2-201ENST00000223398 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
CLIP2-201ENST00000223398 IGFL1Q6UW32 110 aa12.04□□□□□ -0.48
CLIP2-201ENST00000223398 K7EQZ3 153 aa12.03□□□□□ -0.48
CLIP2-201ENST00000223398 A8MWP4 228 aa12.02□□□□□ -0.49
CLIP2-201ENST00000223398 OBSCN-AS1Q96MR7 158 aa12.02□□□□□ -0.49
CLIP2-201ENST00000223398 PSORS1C2Q9UIG4 136 aa12.01□□□□□ -0.49
CLIP2-201ENST00000223398 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
CLIP2-201ENST00000223398 IGLV8-61A0A075B6I0 122 aa12.01□□□□□ -0.49
CLIP2-201ENST00000223398 SPAG11AQ6PDA7 123 aa12.01□□□□□ -0.49
CLIP2-201ENST00000223398 HTTP42858 3142 aa12□□□□□ -0.49
CLIP2-201ENST00000223398 ZNF575Q86XF7 245 aa12□□□□□ -0.49
CLIP2-201ENST00000223398 IGLV7-43P04211 117 aa11.99□□□□□ -0.49
CLIP2-201ENST00000223398 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
CLIP2-201ENST00000223398 MRPL34Q9BQ48 92 aaKnown RBP11.99□□□□□ -0.49
CLIP2-201ENST00000223398 C8orf87E5RJ46 101 aa11.98□□□□□ -0.49
CLIP2-201ENST00000223398 TNP2Q05952 138 aa11.97□□□□□ -0.49
CLIP2-201ENST00000223398 C1orf195Q5TG92 126 aa11.97□□□□□ -0.49
CLIP2-201ENST00000223398 SSBP3-AS1Q7Z2R9 100 aa11.95□□□□□ -0.5
CLIP2-201ENST00000223398 Q8N377 158 aa11.95□□□□□ -0.5
CLIP2-201ENST00000223398 TEP1Q99973 2627 aaKnown RBP11.94□□□□□ -0.5
CLIP2-201ENST00000223398 TLX1NBP0CAT3 122 aa11.94□□□□□ -0.5
CLIP2-201ENST00000223398 MKI67P46013 3256 aaKnown RBP11.94□□□□□ -0.5
CLIP2-201ENST00000223398 ERC2-IT1O76042 136 aa11.9□□□□□ -0.5
CLIP2-201ENST00000223398 CNBPP62633 177 aaKnown RBP11.9□□□□□ -0.5
CLIP2-201ENST00000223398 LOC101927531A0A1B0GV80 90 aa11.89□□□□□ -0.51
CLIP2-201ENST00000223398 H3BPC8 53 aa11.89□□□□□ -0.51
CLIP2-201ENST00000223398 BRCA2P51587 3418 aa11.89□□□□□ -0.51
CLIP2-201ENST00000223398 C8orf17Q9NRJ1 99 aa11.88□□□□□ -0.51
CLIP2-201ENST00000223398 SETXQ7Z333 2677 aaKnown RBP11.88□□□□□ -0.51
CLIP2-201ENST00000223398 PLA2G2DQ9UNK4 145 aa11.87□□□□□ -0.51
CLIP2-201ENST00000223398 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
CLIP2-201ENST00000223398 SPRR4Q96PI1 79 aa11.85□□□□□ -0.51
CLIP2-201ENST00000223398 A0A1B0GVX0 72 aa11.84□□□□□ -0.51
CLIP2-201ENST00000223398 PRR15Q8IV56 129 aa11.83□□□□□ -0.52
CLIP2-201ENST00000223398 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
CLIP2-201ENST00000223398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-201ENST00000223398 IGLV5-37A0A075B6J1 123 aa11.76□□□□□ -0.53
CLIP2-201ENST00000223398 ZNF292O60281 2723 aa11.75□□□□□ -0.53
CLIP2-201ENST00000223398 CFAP54Q96N23 3096 aa11.75□□□□□ -0.53
CLIP2-201ENST00000223398 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
CLIP2-201ENST00000223398 CR1P17927 2039 aa11.74□□□□□ -0.53
CLIP2-201ENST00000223398 STAB1Q9NY15 2570 aa11.73□□□□□ -0.53
CLIP2-201ENST00000223398 A0A0C4DFX4 3053 aa11.73□□□□□ -0.53
CLIP2-201ENST00000223398 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
CLIP2-201ENST00000223398 PRR26Q8N8Z3 221 aa11.7□□□□□ -0.54
CLIP2-201ENST00000223398 AKAP13Q12802 2813 aa11.7□□□□□ -0.54
CLIP2-201ENST00000223398 WDFY4Q6ZS81 3184 aa11.7□□□□□ -0.54
CLIP2-201ENST00000223398 COA5Q86WW8 74 aa11.7□□□□□ -0.54
CLIP2-201ENST00000223398 A0A1W2PNM2 257 aa11.69□□□□□ -0.54
CLIP2-201ENST00000223398 RBM12B-AS1Q9P1G2 102 aa11.67□□□□□ -0.54
CLIP2-201ENST00000223398 TRANK1O15050 2925 aa11.67□□□□□ -0.54
CLIP2-201ENST00000223398 WIPF1O43516 503 aa11.67□□□□□ -0.54
CLIP2-201ENST00000223398 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
CLIP2-201ENST00000223398 COL6A5A8TX70 2615 aa11.64□□□□□ -0.55
CLIP2-201ENST00000223398 C4orf26Q17RF5 130 aa11.63□□□□□ -0.55
CLIP2-201ENST00000223398 Q8N1X5 172 aa11.62□□□□□ -0.55
CLIP2-201ENST00000223398 DSPP15924 2871 aaKnown RBP11.61□□□□□ -0.55
CLIP2-201ENST00000223398 LINC01554Q52M75 96 aa11.6□□□□□ -0.55
CLIP2-201ENST00000223398 BAHCC1Q9P281 2608 aa11.59□□□□□ -0.55
CLIP2-201ENST00000223398 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
CLIP2-201ENST00000223398 LAMA2P24043 3122 aaKnown RBP11.58□□□□□ -0.56
CLIP2-201ENST00000223398 IGLV5-48A0A075B6I7 105 aa11.56□□□□□ -0.56
CLIP2-201ENST00000223398 XIRP2A4UGR9 3374 aa11.56□□□□□ -0.56
CLIP2-201ENST00000223398 Q6ZSA8 131 aa11.56□□□□□ -0.56
CLIP2-201ENST00000223398 UNC80Q8N2C7 3258 aa11.55□□□□□ -0.56
CLIP2-201ENST00000223398 A8MUN3 132 aa11.54□□□□□ -0.56
CLIP2-201ENST00000223398 FAM104AQ969W3 186 aa11.52□□□□□ -0.57
CLIP2-201ENST00000223398 IGSF10Q6WRI0 2623 aa11.49□□□□□ -0.57
CLIP2-201ENST00000223398 UQCR11O14957 56 aa11.49□□□□□ -0.57
CLIP2-201ENST00000223398 UNC79Q9P2D8 2635 aa11.48□□□□□ -0.57
CLIP2-201ENST00000223398 KRTAP1-5Q9BYS1 174 aa11.48□□□□□ -0.57
CLIP2-201ENST00000223398 MAP1AP78559 2803 aaPredicted RBP11.47□□□□□ -0.57
CLIP2-201ENST00000223398 PLAC8Q9NZF1 115 aa11.46□□□□□ -0.57
CLIP2-201ENST00000223398 M0R2T5 61 aa11.46□□□□□ -0.57
CLIP2-201ENST00000223398 RPS28P62857 69 aaKnown RBP11.46□□□□□ -0.57
CLIP2-201ENST00000223398 PRO0628Q9UI54 55 aa11.46□□□□□ -0.57
CLIP2-201ENST00000223398 TRIOO75962 3097 aa11.46□□□□□ -0.58
CLIP2-201ENST00000223398 NOTCH1P46531 2555 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms