RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 VAMP8Q9BV40 100 aa7.56□□□□□ -1.2
LSM5-201ENST00000223084 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
LSM5-201ENST00000223084 SPANXB1Q9NS25 103 aaPredicted RBP7.56□□□□□ -1.2
LSM5-201ENST00000223084 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
LSM5-201ENST00000223084 NDUFC2O95298 119 aa7.55□□□□□ -1.2
LSM5-201ENST00000223084 DDTP30046 118 aa7.55□□□□□ -1.2
LSM5-201ENST00000223084 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
LSM5-201ENST00000223084 SPRR1AP35321 89 aa7.54□□□□□ -1.2
LSM5-201ENST00000223084 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
LSM5-201ENST00000223084 A0A087X002 238 aa7.53□□□□□ -1.2
LSM5-201ENST00000223084 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
LSM5-201ENST00000223084 SCGB1D4Q6XE38 83 aa7.53□□□□□ -1.2
LSM5-201ENST00000223084 ETDCA0A1B0GVM5 59 aa7.52□□□□□ -1.21
LSM5-201ENST00000223084 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.21
LSM5-201ENST00000223084 SPATA45Q537H7 98 aa7.52□□□□□ -1.21
LSM5-201ENST00000223084 LINC00337Q8N6G1 96 aa7.52□□□□□ -1.21
LSM5-201ENST00000223084 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
LSM5-201ENST00000223084 IGLV6-57P01721 117 aa7.51□□□□□ -1.21
LSM5-201ENST00000223084 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
LSM5-201ENST00000223084 S100A12P80511 92 aa7.51□□□□□ -1.21
LSM5-201ENST00000223084 COX8AP10176 69 aa7.5□□□□□ -1.21
LSM5-201ENST00000223084 CRYGAP11844 174 aa7.5□□□□□ -1.21
LSM5-201ENST00000223084 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
LSM5-201ENST00000223084 SPANXCQ9NY87 97 aa7.5□□□□□ -1.21
LSM5-201ENST00000223084 B5MCH6 92 aa7.49□□□□□ -1.21
LSM5-201ENST00000223084 DLEU1O43261 78 aa7.49□□□□□ -1.21
LSM5-201ENST00000223084 SMCR5Q8TEV8 140 aa7.49□□□□□ -1.21
LSM5-201ENST00000223084 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
LSM5-201ENST00000223084 KRTAP13-2Q52LG2 175 aa7.48□□□□□ -1.21
LSM5-201ENST00000223084 OR13C6PQ8NH95 151 aa7.48□□□□□ -1.21
LSM5-201ENST00000223084 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
LSM5-201ENST00000223084 TYMSOSQ8TAI1 123 aa7.47□□□□□ -1.21
LSM5-201ENST00000223084 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
LSM5-201ENST00000223084 ERC2-IT1O76042 136 aa7.46□□□□□ -1.22
LSM5-201ENST00000223084 FAM229BQ4G0N7 80 aa7.46□□□□□ -1.22
LSM5-201ENST00000223084 SLC25A34Q6PIV7 304 aa7.46□□□□□ -1.22
LSM5-201ENST00000223084 SPRR4Q96PI1 79 aa7.46□□□□□ -1.22
LSM5-201ENST00000223084 Q9BRP9 147 aa7.46□□□□□ -1.22
LSM5-201ENST00000223084 IFITM1P13164 125 aa7.45□□□□□ -1.22
LSM5-201ENST00000223084 Q6ZRX8 168 aa7.45□□□□□ -1.22
LSM5-201ENST00000223084 C14orf144Q96I85 54 aa7.45□□□□□ -1.22
LSM5-201ENST00000223084 Q6ZVH6 145 aa7.44□□□□□ -1.22
LSM5-201ENST00000223084 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
LSM5-201ENST00000223084 C3orf22Q8N5N4 141 aa7.44□□□□□ -1.22
LSM5-201ENST00000223084 C12orf57Q99622 126 aa7.44□□□□□ -1.22
LSM5-201ENST00000223084 PPDPFQ9H3Y8 114 aa7.44□□□□□ -1.22
LSM5-201ENST00000223084 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
LSM5-201ENST00000223084 TSPAN13O95857 204 aa7.43□□□□□ -1.22
LSM5-201ENST00000223084 COPS9Q8WXC6 57 aa7.43□□□□□ -1.22
LSM5-201ENST00000223084 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
LSM5-201ENST00000223084 HIGD1BQ9P298 99 aa7.42□□□□□ -1.22
LSM5-201ENST00000223084 UQCR10Q9UDW1 63 aa7.42□□□□□ -1.22
LSM5-201ENST00000223084 GAGE2AQ6NT46 116 aa7.41□□□□□ -1.22
LSM5-201ENST00000223084 CBY1Q9Y3M2 126 aa7.41□□□□□ -1.22
LSM5-201ENST00000223084 HINT1P49773 126 aaPredicted RBP7.4□□□□□ -1.22
LSM5-201ENST00000223084 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
LSM5-201ENST00000223084 A6NDN8 102 aa7.39□□□□□ -1.23
LSM5-201ENST00000223084 C6orf99Q4VX62 202 aa7.39□□□□□ -1.23
LSM5-201ENST00000223084 LINC00483Q53H64 154 aa7.38□□□□□ -1.23
LSM5-201ENST00000223084 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
LSM5-201ENST00000223084 ST20-AS1Q8NBB2 130 aa7.38□□□□□ -1.23
LSM5-201ENST00000223084 TSTD3H0UI37 97 aa7.37□□□□□ -1.23
LSM5-201ENST00000223084 COX7BP24311 80 aa7.37□□□□□ -1.23
LSM5-201ENST00000223084 LRP2P98164 4655 aa7.36□□□□□ -1.23
LSM5-201ENST00000223084 TRAV13-2A0A0B4J235 113 aa7.36□□□□□ -1.23
LSM5-201ENST00000223084 A4D1N5 150 aa7.36□□□□□ -1.23
LSM5-201ENST00000223084 ELOF1P60002 83 aaKnown RBP7.36□□□□□ -1.23
LSM5-201ENST00000223084 TAL2Q16559 108 aa7.36□□□□□ -1.23
LSM5-201ENST00000223084 PRO1933Q9H354 126 aa7.36□□□□□ -1.23
LSM5-201ENST00000223084 HIST1H4GQ99525 98 aa7.35□□□□□ -1.23
LSM5-201ENST00000223084 IGLV9-49A0A0B4J1Y8 123 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 HSD52Q0P140 79 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 PRR4Q16378 134 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 Q8NBF4 154 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 SMIM11BQ8TCY0 68 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 DHRS4-AS1Q9P1J3 65 aa7.34□□□□□ -1.23
LSM5-201ENST00000223084 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
LSM5-201ENST00000223084 MOBPQ13875 183 aa7.33□□□□□ -1.24
LSM5-201ENST00000223084 TRBV7-6A0A0J9YX20 115 aa7.31□□□□□ -1.24
LSM5-201ENST00000223084 A0A1B0GWB2 263 aa7.31□□□□□ -1.24
LSM5-201ENST00000223084 CEND1Q8N111 149 aa7.31□□□□□ -1.24
LSM5-201ENST00000223084 RETNLBQ9BQ08 111 aa7.31□□□□□ -1.24
LSM5-201ENST00000223084 LPAP08519 4548 aa7.31□□□□□ -1.24
LSM5-201ENST00000223084 H3BS24 57 aa7.29□□□□□ -1.24
LSM5-201ENST00000223084 C9orf153Q5TBE3 101 aa7.29□□□□□ -1.24
LSM5-201ENST00000223084 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
LSM5-201ENST00000223084 SPRR1BP22528 89 aa7.28□□□□□ -1.24
LSM5-201ENST00000223084 SPAG11AQ6PDA7 123 aa7.28□□□□□ -1.24
LSM5-201ENST00000223084 M0R143 59 aa7.27□□□□□ -1.25
LSM5-201ENST00000223084 FXYD2P54710 66 aa7.27□□□□□ -1.25
LSM5-201ENST00000223084 SSBP3-AS1Q7Z2R9 100 aa7.27□□□□□ -1.25
LSM5-201ENST00000223084 A0A0B4J2C4 111 aa7.26□□□□□ -1.25
LSM5-201ENST00000223084 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
LSM5-201ENST00000223084 CFC1P0CG37 223 aa7.26□□□□□ -1.25
LSM5-201ENST00000223084 H7C2G1 150 aa7.25□□□□□ -1.25
LSM5-201ENST00000223084 LINC01547P58512 204 aaPredicted RBP7.25□□□□□ -1.25
LSM5-201ENST00000223084 CTAG1AP78358 180 aa7.25□□□□□ -1.25
LSM5-201ENST00000223084 VAMP3Q15836 100 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms