RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
SRP54-201ENST00000216774 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
SRP54-201ENST00000216774 C7orf33Q8WU49 177 aa8.69□□□□□ -1.02
SRP54-201ENST00000216774 PLA2G2DQ9UNK4 145 aa8.69□□□□□ -1.02
SRP54-201ENST00000216774 FAM236DA0A1B0GTK5 79 aa8.68□□□□□ -1.02
SRP54-201ENST00000216774 OXTP01178 125 aa8.68□□□□□ -1.02
SRP54-201ENST00000216774 FAM236CP0DP71 79 aa8.68□□□□□ -1.02
SRP54-201ENST00000216774 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
SRP54-201ENST00000216774 DHRS4-AS1Q9P1J3 65 aa8.66□□□□□ -1.02
SRP54-201ENST00000216774 IGLV5-48A0A075B6I7 105 aa8.66□□□□□ -1.02
SRP54-201ENST00000216774 PKD1L1Q8TDX9 2849 aa8.66□□□□□ -1.02
SRP54-201ENST00000216774 NREPQ16612 68 aa8.65□□□□□ -1.02
SRP54-201ENST00000216774 Q8N377 158 aa8.65□□□□□ -1.02
SRP54-201ENST00000216774 IGLV5-37A0A075B6J1 123 aa8.65□□□□□ -1.03
SRP54-201ENST00000216774 A0A1B0GW54 56 aa8.64□□□□□ -1.03
SRP54-201ENST00000216774 Q6ZRX8 168 aa8.64□□□□□ -1.03
SRP54-201ENST00000216774 TM2D3Q9BRN9 247 aa8.64□□□□□ -1.03
SRP54-201ENST00000216774 BPY2O14599 106 aa8.64□□□□□ -1.03
SRP54-201ENST00000216774 PRYO14603 147 aa8.64□□□□□ -1.03
SRP54-201ENST00000216774 NDUFC1O43677 76 aa8.64□□□□□ -1.03
SRP54-201ENST00000216774 MRAPQ8TCY5 172 aa8.64□□□□□ -1.03
SRP54-201ENST00000216774 IGKV4-1P06312 121 aa8.63□□□□□ -1.03
SRP54-201ENST00000216774 KRTAP4-16G5E9R7 235 aaPredicted RBP8.63□□□□□ -1.03
SRP54-201ENST00000216774 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
SRP54-201ENST00000216774 DEFB105AQ8NG35 78 aa8.63□□□□□ -1.03
SRP54-201ENST00000216774 SNURFQ9Y675 71 aa8.62□□□□□ -1.03
SRP54-201ENST00000216774 SERP1Q9Y6X1 66 aa8.62□□□□□ -1.03
SRP54-201ENST00000216774 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
SRP54-201ENST00000216774 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
SRP54-201ENST00000216774 SPRR1AP35321 89 aa8.61□□□□□ -1.03
SRP54-201ENST00000216774 C5orf47Q569G3 176 aa8.61□□□□□ -1.03
SRP54-201ENST00000216774 RMI2Q96E14 147 aa8.61□□□□□ -1.03
SRP54-201ENST00000216774 TENM3Q9P273 2699 aa8.61□□□□□ -1.03
SRP54-201ENST00000216774 FUSP35637 526 aaKnown RBP eCLIP8.6□□□□□ -1.03
SRP54-201ENST00000216774 C3orf84H3BNL1 204 aa8.6□□□□□ -1.03
SRP54-201ENST00000216774 Q9BRP9 147 aa8.6□□□□□ -1.03
SRP54-201ENST00000216774 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
SRP54-201ENST00000216774 Q8N9L7 120 aa8.59□□□□□ -1.03
SRP54-201ENST00000216774 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
SRP54-201ENST00000216774 RPL37AP8A6NKH3 93 aa8.59□□□□□ -1.03
SRP54-201ENST00000216774 F8WEM9 126 aa8.59□□□□□ -1.03
SRP54-201ENST00000216774 Q5XG85 94 aa8.59□□□□□ -1.03
SRP54-201ENST00000216774 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
SRP54-201ENST00000216774 TNP2Q05952 138 aa8.58□□□□□ -1.04
SRP54-201ENST00000216774 TMEM254Q8TBM7 123 aa8.57□□□□□ -1.04
SRP54-201ENST00000216774 ATP5EP56381 51 aaPredicted RBP8.57□□□□□ -1.04
SRP54-201ENST00000216774 ANK2Q01484 3957 aa8.56□□□□□ -1.04
SRP54-201ENST00000216774 KRTAP24-1Q3LI83 254 aa8.56□□□□□ -1.04
SRP54-201ENST00000216774 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
SRP54-201ENST00000216774 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
SRP54-201ENST00000216774 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
SRP54-201ENST00000216774 A0A1W2PNM2 257 aa8.55□□□□□ -1.04
SRP54-201ENST00000216774 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
SRP54-201ENST00000216774 MRPL55Q7Z7F7 128 aaKnown RBP8.55□□□□□ -1.04
SRP54-201ENST00000216774 Q8NBF4 154 aa8.54□□□□□ -1.04
SRP54-201ENST00000216774 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
SRP54-201ENST00000216774 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
SRP54-201ENST00000216774 SPRR4Q96PI1 79 aa8.53□□□□□ -1.04
SRP54-201ENST00000216774 A0A0U1RQV1 116 aa8.51□□□□□ -1.05
SRP54-201ENST00000216774 DNAH3Q8TD57 4116 aa8.51□□□□□ -1.05
SRP54-201ENST00000216774 CMYA5Q8N3K9 4069 aa8.5□□□□□ -1.05
SRP54-201ENST00000216774 UBE2BP63146 152 aa8.5□□□□□ -1.05
SRP54-201ENST00000216774 REG3GQ6UW15 175 aa8.5□□□□□ -1.05
SRP54-201ENST00000216774 DNAH1Q9P2D7 4330 aa8.49□□□□□ -1.05
SRP54-201ENST00000216774 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
SRP54-201ENST00000216774 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
SRP54-201ENST00000216774 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
SRP54-201ENST00000216774 SMIM29Q86T20 159 aa8.46□□□□□ -1.05
SRP54-201ENST00000216774 STAB1Q9NY15 2570 aa8.46□□□□□ -1.06
SRP54-201ENST00000216774 LCE6AA0A183 80 aa8.45□□□□□ -1.06
SRP54-201ENST00000216774 DSCR10P59022 87 aa8.45□□□□□ -1.06
SRP54-201ENST00000216774 F8P00451 2351 aa8.44□□□□□ -1.06
SRP54-201ENST00000216774 LINC00476Q8WZB0 136 aa8.43□□□□□ -1.06
SRP54-201ENST00000216774 C16orf90A8MZG2 172 aa8.43□□□□□ -1.06
SRP54-201ENST00000216774 HIGD2AQ9BW72 106 aa8.43□□□□□ -1.06
SRP54-201ENST00000216774 CNBPP62633 177 aaKnown RBP8.42□□□□□ -1.06
SRP54-201ENST00000216774 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
SRP54-201ENST00000216774 FP248Q71RG6 208 aaPredicted RBP8.42□□□□□ -1.06
SRP54-201ENST00000216774 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
SRP54-201ENST00000216774 A0A096LNI7 61 aa8.41□□□□□ -1.06
SRP54-201ENST00000216774 K7EQZ3 153 aa8.41□□□□□ -1.06
SRP54-201ENST00000216774 PRB2P02812 416 aaPredicted RBP8.4□□□□□ -1.06
SRP54-201ENST00000216774 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
SRP54-201ENST00000216774 K7EIL1 84 aa8.4□□□□□ -1.07
SRP54-201ENST00000216774 NOTCH1P46531 2555 aa8.39□□□□□ -1.07
SRP54-201ENST00000216774 HCG22E2RYF7 251 aa8.37□□□□□ -1.07
SRP54-201ENST00000216774 PRLHP81277 87 aa8.37□□□□□ -1.07
SRP54-201ENST00000216774 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
SRP54-201ENST00000216774 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
SRP54-201ENST00000216774 PSCAO43653 123 aa8.37□□□□□ -1.07
SRP54-201ENST00000216774 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
SRP54-201ENST00000216774 ZCCHC13Q8WW36 166 aaKnown RBP8.36□□□□□ -1.07
SRP54-201ENST00000216774 HUWE1Q7Z6Z7 4374 aaKnown RBP8.35□□□□□ -1.07
SRP54-201ENST00000216774 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
SRP54-201ENST00000216774 NBEAL1Q6ZS30 2694 aa8.34□□□□□ -1.07
SRP54-201ENST00000216774 C14orf177Q52M58 125 aa8.34□□□□□ -1.07
SRP54-201ENST00000216774 H0Y9J4 135 aa8.33□□□□□ -1.08
SRP54-201ENST00000216774 A0A0G2JQZ4 141 aa8.33□□□□□ -1.08
SRP54-201ENST00000216774 A0A087WSZ3 146 aa8.32□□□□□ -1.08
SRP54-201ENST00000216774 UBE2AP49459 152 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms