RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SMIM26A0A096LP01 95 aa9.18□□□□□ -0.94
SIX4-201ENST00000216513 TNP2Q05952 138 aa9.18□□□□□ -0.94
SIX4-201ENST00000216513 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
SIX4-201ENST00000216513 WDFY4Q6ZS81 3184 aa9.17□□□□□ -0.94
SIX4-201ENST00000216513 Q8NBF4 154 aa9.17□□□□□ -0.94
SIX4-201ENST00000216513 VPS13AQ96RL7 3174 aa9.17□□□□□ -0.94
SIX4-201ENST00000216513 ATP11AUNQ6ZP68 121 aa9.17□□□□□ -0.94
SIX4-201ENST00000216513 SPEGQ15772 3267 aa9.14□□□□□ -0.95
SIX4-201ENST00000216513 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
SIX4-201ENST00000216513 KLK9Q2XQG4 91 aa9.14□□□□□ -0.95
SIX4-201ENST00000216513 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
SIX4-201ENST00000216513 LINC00304Q8N9R0 145 aa9.14□□□□□ -0.95
SIX4-201ENST00000216513 Q96NJ1 140 aa9.13□□□□□ -0.95
SIX4-201ENST00000216513 C1orf64Q8NEQ6 169 aa9.13□□□□□ -0.95
SIX4-201ENST00000216513 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
SIX4-201ENST00000216513 C7orf65Q6ZTY9 151 aa9.12□□□□□ -0.95
SIX4-201ENST00000216513 TMEM254Q8TBM7 123 aa9.12□□□□□ -0.95
SIX4-201ENST00000216513 CENPEQ02224 2701 aa9.1□□□□□ -0.95
SIX4-201ENST00000216513 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
SIX4-201ENST00000216513 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
SIX4-201ENST00000216513 Q6ZRX8 168 aa9.09□□□□□ -0.95
SIX4-201ENST00000216513 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
SIX4-201ENST00000216513 ANAPC11Q9NYG5 84 aa9.09□□□□□ -0.95
SIX4-201ENST00000216513 MYO15AQ9UKN7 3530 aa9.08□□□□□ -0.96
SIX4-201ENST00000216513 ZNF575Q86XF7 245 aa9.08□□□□□ -0.96
SIX4-201ENST00000216513 LINC00313P59037 77 aa9.07□□□□□ -0.96
SIX4-201ENST00000216513 CR1P17927 2039 aa9.06□□□□□ -0.96
SIX4-201ENST00000216513 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
SIX4-201ENST00000216513 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
SIX4-201ENST00000216513 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
SIX4-201ENST00000216513 ZNF861PO60384 105 aa9.04□□□□□ -0.96
SIX4-201ENST00000216513 ZNF292O60281 2723 aa9.04□□□□□ -0.96
SIX4-201ENST00000216513 ELOF1P60002 83 aaKnown RBP9.03□□□□□ -0.96
SIX4-201ENST00000216513 EYSQ5T1H1 3165 aa9.02□□□□□ -0.96
SIX4-201ENST00000216513 MGAQ8IWI9 3026 aa9.02□□□□□ -0.97
SIX4-201ENST00000216513 COL6A3P12111 3177 aa9.01□□□□□ -0.97
SIX4-201ENST00000216513 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
SIX4-201ENST00000216513 SPAG11AQ6PDA7 123 aa9□□□□□ -0.97
SIX4-201ENST00000216513 IGLV5-45A0A087WSX0 123 aa9□□□□□ -0.97
SIX4-201ENST00000216513 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
SIX4-201ENST00000216513 LINC00612Q8N6U2 182 aa9□□□□□ -0.97
SIX4-201ENST00000216513 USP34Q70CQ2 3546 aa9□□□□□ -0.97
SIX4-201ENST00000216513 LCE6AA0A183 80 aa8.99□□□□□ -0.97
SIX4-201ENST00000216513 WIPF1O43516 503 aa8.99□□□□□ -0.97
SIX4-201ENST00000216513 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
SIX4-201ENST00000216513 SPTBN5Q9NRC6 3674 aaKnown RBP8.98□□□□□ -0.97
SIX4-201ENST00000216513 CXCL6P80162 114 aa8.98□□□□□ -0.97
SIX4-201ENST00000216513 PRR34Q9NV39 138 aa8.98□□□□□ -0.97
SIX4-201ENST00000216513 A0A1B0GU69 56 aa8.98□□□□□ -0.97
SIX4-201ENST00000216513 LAMA1P25391 3075 aa8.98□□□□□ -0.97
SIX4-201ENST00000216513 IGLV1-50A0A075B6I6 118 aa8.98□□□□□ -0.97
SIX4-201ENST00000216513 VPREB1P12018 145 aa8.98□□□□□ -0.97
SIX4-201ENST00000216513 C4orf26Q17RF5 130 aa8.96□□□□□ -0.98
SIX4-201ENST00000216513 TRANK1O15050 2925 aa8.96□□□□□ -0.98
SIX4-201ENST00000216513 AKAP13Q12802 2813 aa8.95□□□□□ -0.98
SIX4-201ENST00000216513 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
SIX4-201ENST00000216513 OBSCN-AS1Q96MR7 158 aa8.93□□□□□ -0.98
SIX4-201ENST00000216513 PRO0461Q9UI25 63 aa8.93□□□□□ -0.98
SIX4-201ENST00000216513 Q6ZQT0 140 aa8.92□□□□□ -0.98
SIX4-201ENST00000216513 TEX15Q9BXT5 2789 aa8.92□□□□□ -0.98
SIX4-201ENST00000216513 LITAFQ99732 161 aa8.92□□□□□ -0.98
SIX4-201ENST00000216513 DSPP15924 2871 aaKnown RBP8.91□□□□□ -0.98
SIX4-201ENST00000216513 ACYP2P14621 99 aa8.9□□□□□ -0.98
SIX4-201ENST00000216513 K7EQZ3 153 aa8.9□□□□□ -0.99
SIX4-201ENST00000216513 IGSF10Q6WRI0 2623 aa8.89□□□□□ -0.99
SIX4-201ENST00000216513 DSCR10P59022 87 aa8.89□□□□□ -0.99
SIX4-201ENST00000216513 CNBPP62633 177 aaKnown RBP8.89□□□□□ -0.99
SIX4-201ENST00000216513 M0R2T5 61 aa8.88□□□□□ -0.99
SIX4-201ENST00000216513 Q5VSD8 79 aa8.87□□□□□ -0.99
SIX4-201ENST00000216513 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
SIX4-201ENST00000216513 PRR26Q8N8Z3 221 aa8.86□□□□□ -0.99
SIX4-201ENST00000216513 COL6A5A8TX70 2615 aa8.86□□□□□ -0.99
SIX4-201ENST00000216513 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
SIX4-201ENST00000216513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
SIX4-201ENST00000216513 KCNQ1DNQ9H478 68 aa8.84□□□□□ -0.99
SIX4-201ENST00000216513 CFAP47Q6ZTR5 3102 aa8.84□□□□□ -0.99
SIX4-201ENST00000216513 IGLV6-57P01721 117 aa8.84□□□□□ -0.99
SIX4-201ENST00000216513 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
SIX4-201ENST00000216513 IGLV7-46A0A075B6I9 117 aa8.82□□□□□ -1
SIX4-201ENST00000216513 GCN1Q92616 2671 aaKnown RBP8.82□□□□□ -1
SIX4-201ENST00000216513 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
SIX4-201ENST00000216513 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
SIX4-201ENST00000216513 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
SIX4-201ENST00000216513 IGLV5-37A0A075B6J1 123 aa8.8□□□□□ -1
SIX4-201ENST00000216513 STAB1Q9NY15 2570 aa8.8□□□□□ -1
SIX4-201ENST00000216513 UNC79Q9P2D8 2635 aa8.8□□□□□ -1
SIX4-201ENST00000216513 REV3LO60673 3130 aa8.79□□□□□ -1
SIX4-201ENST00000216513 C8orf87E5RJ46 101 aa8.79□□□□□ -1
SIX4-201ENST00000216513 LOC110117498A0A087WWA1 95 aa8.78□□□□□ -1
SIX4-201ENST00000216513 ERC2-IT1O76042 136 aa8.78□□□□□ -1
SIX4-201ENST00000216513 Q6ZSA8 131 aa8.77□□□□□ -1
SIX4-201ENST00000216513 IGFL1Q6UW32 110 aa8.77□□□□□ -1.01
SIX4-201ENST00000216513 SPRR4Q96PI1 79 aa8.77□□□□□ -1.01
SIX4-201ENST00000216513 FRYQ5TBA9 3013 aa8.74□□□□□ -1.01
SIX4-201ENST00000216513 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
SIX4-201ENST00000216513 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
SIX4-201ENST00000216513 CHD6Q8TD26 2715 aa8.73□□□□□ -1.01
SIX4-201ENST00000216513 WDFY3Q8IZQ1 3526 aa8.72□□□□□ -1.01
SIX4-201ENST00000216513 A8MWP4 228 aa8.72□□□□□ -1.01
SIX4-201ENST00000216513 FRYLO94915 3013 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms