RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 HIGD2AQ9BW72 106 aa10.3□□□□□ -0.76
MRPL28-201ENST00000199706 HSBP1L1C9JCN9 74 aa10.29□□□□□ -0.76
MRPL28-201ENST00000199706 NPC2P61916 151 aa10.29□□□□□ -0.76
MRPL28-201ENST00000199706 LINC00518Q8N0U6 118 aa10.29□□□□□ -0.76
MRPL28-201ENST00000199706 TRAV23DV6A0A075B6W5 121 aa10.28□□□□□ -0.76
MRPL28-201ENST00000199706 B5MCH6 92 aa10.28□□□□□ -0.76
MRPL28-201ENST00000199706 Q6ZRX8 168 aa10.28□□□□□ -0.76
MRPL28-201ENST00000199706 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
MRPL28-201ENST00000199706 SPRR4Q96PI1 79 aa10.27□□□□□ -0.77
MRPL28-201ENST00000199706 ZNF73O43830 326 aaPredicted RBP10.25□□□□□ -0.77
MRPL28-201ENST00000199706 CTAG1AP78358 180 aa10.25□□□□□ -0.77
MRPL28-201ENST00000199706 JOSD1Q15040 202 aaPredicted RBP10.25□□□□□ -0.77
MRPL28-201ENST00000199706 KRTAP13-2Q52LG2 175 aa10.25□□□□□ -0.77
MRPL28-201ENST00000199706 TYMSOSQ8TAI1 123 aa10.25□□□□□ -0.77
MRPL28-201ENST00000199706 SMCR5Q8TEV8 140 aa10.25□□□□□ -0.77
MRPL28-201ENST00000199706 LINC00483Q53H64 154 aa10.22□□□□□ -0.77
MRPL28-201ENST00000199706 ANAPC11Q9NYG5 84 aa10.22□□□□□ -0.77
MRPL28-201ENST00000199706 Q9BRP9 147 aa10.21□□□□□ -0.77
MRPL28-201ENST00000199706 SCGB1D1O95968 90 aa10.2□□□□□ -0.78
MRPL28-201ENST00000199706 HINT1P49773 126 aaPredicted RBP10.2□□□□□ -0.78
MRPL28-201ENST00000199706 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
MRPL28-201ENST00000199706 LRP2P98164 4655 aa10.19□□□□□ -0.78
MRPL28-201ENST00000199706 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
MRPL28-201ENST00000199706 TRBV7-6A0A0J9YX20 115 aa10.17□□□□□ -0.78
MRPL28-201ENST00000199706 MUSTN1Q8IVN3 82 aa10.17□□□□□ -0.78
MRPL28-201ENST00000199706 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
MRPL28-201ENST00000199706 DLEU1O43261 78 aa10.16□□□□□ -0.78
MRPL28-201ENST00000199706 ERC2-IT1O76042 136 aa10.16□□□□□ -0.78
MRPL28-201ENST00000199706 COX8AP10176 69 aa10.15□□□□□ -0.78
MRPL28-201ENST00000199706 DHRS4-AS1Q9P1J3 65 aa10.15□□□□□ -0.78
MRPL28-201ENST00000199706 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
MRPL28-201ENST00000199706 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
MRPL28-201ENST00000199706 SPAG11AQ6PDA7 123 aa10.13□□□□□ -0.79
MRPL28-201ENST00000199706 C3orf22Q8N5N4 141 aa10.13□□□□□ -0.79
MRPL28-201ENST00000199706 C6orf99Q4VX62 202 aa10.12□□□□□ -0.79
MRPL28-201ENST00000199706 GAGE2AQ6NT46 116 aa10.11□□□□□ -0.79
MRPL28-201ENST00000199706 A0A1B0GWB2 263 aa10.1□□□□□ -0.79
MRPL28-201ENST00000199706 COX7BP24311 80 aa10.1□□□□□ -0.79
MRPL28-201ENST00000199706 A4D1N5 150 aa10.09□□□□□ -0.79
MRPL28-201ENST00000199706 A6NDN8 102 aa10.09□□□□□ -0.79
MRPL28-201ENST00000199706 SPRR1BP22528 89 aa10.08□□□□□ -0.8
MRPL28-201ENST00000199706 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
MRPL28-201ENST00000199706 TSPAN13O95857 204 aa10.07□□□□□ -0.8
MRPL28-201ENST00000199706 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
MRPL28-201ENST00000199706 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
MRPL28-201ENST00000199706 SPATA45Q537H7 98 aa10.06□□□□□ -0.8
MRPL28-201ENST00000199706 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
MRPL28-201ENST00000199706 PAM16Q9Y3D7 125 aa10.05□□□□□ -0.8
MRPL28-201ENST00000199706 RPS29P62273 56 aaKnown RBP10.04□□□□□ -0.8
MRPL28-201ENST00000199706 Q8NBF4 154 aa10.04□□□□□ -0.8
MRPL28-201ENST00000199706 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
MRPL28-201ENST00000199706 SPINK1P00995 79 aa10.03□□□□□ -0.8
MRPL28-201ENST00000199706 PRR4Q16378 134 aa10.03□□□□□ -0.8
MRPL28-201ENST00000199706 C4orf48Q5BLP8 95 aa10.03□□□□□ -0.8
MRPL28-201ENST00000199706 ST20-AS1Q8NBB2 130 aa10.03□□□□□ -0.8
MRPL28-201ENST00000199706 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
MRPL28-201ENST00000199706 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
MRPL28-201ENST00000199706 MOBPQ13875 183 aa10.02□□□□□ -0.81
MRPL28-201ENST00000199706 C14orf144Q96I85 54 aa10.01□□□□□ -0.81
MRPL28-201ENST00000199706 IGLV9-49A0A0B4J1Y8 123 aa10□□□□□ -0.81
MRPL28-201ENST00000199706 IGLV5-48A0A075B6I7 105 aa9.99□□□□□ -0.81
MRPL28-201ENST00000199706 VAMP3Q15836 100 aa9.99□□□□□ -0.81
MRPL28-201ENST00000199706 PYY3Q5JQD4 70 aa9.99□□□□□ -0.81
MRPL28-201ENST00000199706 TAL2Q16559 108 aa9.98□□□□□ -0.81
MRPL28-201ENST00000199706 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
MRPL28-201ENST00000199706 LPAP08519 4548 aa9.98□□□□□ -0.81
MRPL28-201ENST00000199706 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
MRPL28-201ENST00000199706 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
MRPL28-201ENST00000199706 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.82
MRPL28-201ENST00000199706 SLC25A20O43772 301 aa9.95□□□□□ -0.82
MRPL28-201ENST00000199706 C9orf153Q5TBE3 101 aa9.95□□□□□ -0.82
MRPL28-201ENST00000199706 TMA7Q9Y2S6 64 aaKnown RBP9.95□□□□□ -0.82
MRPL28-201ENST00000199706 A0A0B4J2C4 111 aa9.94□□□□□ -0.82
MRPL28-201ENST00000199706 LINC01547P58512 204 aaPredicted RBP9.93□□□□□ -0.82
MRPL28-201ENST00000199706 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
MRPL28-201ENST00000199706 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
MRPL28-201ENST00000199706 LINC00575Q6W349 94 aa9.93□□□□□ -0.82
MRPL28-201ENST00000199706 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
MRPL28-201ENST00000199706 CFC1P0CG37 223 aa9.92□□□□□ -0.82
MRPL28-201ENST00000199706 RETNLBQ9BQ08 111 aa9.92□□□□□ -0.82
MRPL28-201ENST00000199706 TMEM238LA0A1B0GVL6 79 aa9.91□□□□□ -0.82
MRPL28-201ENST00000199706 A6NJY4 79 aa9.91□□□□□ -0.82
MRPL28-201ENST00000199706 CEND1Q8N111 149 aa9.91□□□□□ -0.82
MRPL28-201ENST00000199706 C12orf57Q99622 126 aa9.91□□□□□ -0.82
MRPL28-201ENST00000199706 RNF213Q63HN8 5207 aa9.91□□□□□ -0.82
MRPL28-201ENST00000199706 SMIM29Q86T20 159 aa9.9□□□□□ -0.82
MRPL28-201ENST00000199706 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
MRPL28-201ENST00000199706 CD164Q04900 197 aa9.89□□□□□ -0.83
MRPL28-201ENST00000199706 Q8N377 158 aa9.89□□□□□ -0.83
MRPL28-201ENST00000199706 RAB37Q96AX2 223 aa9.89□□□□□ -0.83
MRPL28-201ENST00000199706 hADV29S1A0JD25 119 aa9.88□□□□□ -0.83
MRPL28-201ENST00000199706 DEFB105AQ8NG35 78 aa9.88□□□□□ -0.83
MRPL28-201ENST00000199706 Q1RN00 199 aa9.86□□□□□ -0.83
MRPL28-201ENST00000199706 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.86□□□□□ -0.83
MRPL28-201ENST00000199706 PPDPFLQ8WWR9 84 aa9.86□□□□□ -0.83
MRPL28-201ENST00000199706 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
MRPL28-201ENST00000199706 HSD52Q0P140 79 aa9.85□□□□□ -0.83
MRPL28-201ENST00000199706 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
MRPL28-201ENST00000199706 Q6ZQY7 126 aa9.84□□□□□ -0.83
MRPL28-201ENST00000199706 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms