RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
LMCD1-201ENST00000157600 MRPL34Q9BQ48 92 aaKnown RBP8.41□□□□□ -1.06
LMCD1-201ENST00000157600 IGLV1-50A0A075B6I6 118 aa8.41□□□□□ -1.06
LMCD1-201ENST00000157600 Q9UF83 564 aa8.4□□□□□ -1.07
LMCD1-201ENST00000157600 SSBP3-AS1Q7Z2R9 100 aa8.39□□□□□ -1.07
LMCD1-201ENST00000157600 KMT2BQ9UMN6 2715 aaPredicted RBP8.38□□□□□ -1.07
LMCD1-201ENST00000157600 LINC00612Q8N6U2 182 aa8.38□□□□□ -1.07
LMCD1-201ENST00000157600 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
LMCD1-201ENST00000157600 UQCR11O14957 56 aa8.37□□□□□ -1.07
LMCD1-201ENST00000157600 C4orf26Q17RF5 130 aa8.37□□□□□ -1.07
LMCD1-201ENST00000157600 TEX15Q9BXT5 2789 aa8.36□□□□□ -1.07
LMCD1-201ENST00000157600 K7EQZ3 153 aa8.36□□□□□ -1.07
LMCD1-201ENST00000157600 WWC2-AS2Q96NR7 200 aa8.36□□□□□ -1.07
LMCD1-201ENST00000157600 KRTAP24-1Q3LI83 254 aa8.35□□□□□ -1.07
LMCD1-201ENST00000157600 SERTAD4-AS1Q5TG53 156 aa8.34□□□□□ -1.07
LMCD1-201ENST00000157600 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
LMCD1-201ENST00000157600 GCN1Q92616 2671 aaKnown RBP8.33□□□□□ -1.08
LMCD1-201ENST00000157600 COA5Q86WW8 74 aa8.33□□□□□ -1.08
LMCD1-201ENST00000157600 ZNF861PO60384 105 aa8.33□□□□□ -1.08
LMCD1-201ENST00000157600 A0A1B0GVX0 72 aa8.32□□□□□ -1.08
LMCD1-201ENST00000157600 Q96NJ1 140 aa8.32□□□□□ -1.08
LMCD1-201ENST00000157600 CEP350Q5VT06 3117 aa8.32□□□□□ -1.08
LMCD1-201ENST00000157600 UNC79Q9P2D8 2635 aa8.31□□□□□ -1.08
LMCD1-201ENST00000157600 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
LMCD1-201ENST00000157600 IGFL1Q6UW32 110 aa8.31□□□□□ -1.08
LMCD1-201ENST00000157600 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
LMCD1-201ENST00000157600 ZNF292O60281 2723 aa8.3□□□□□ -1.08
LMCD1-201ENST00000157600 CHTF8P0CG12 524 aa8.3□□□□□ -1.08
LMCD1-201ENST00000157600 NOTCH1P46531 2555 aa8.3□□□□□ -1.08
LMCD1-201ENST00000157600 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
LMCD1-201ENST00000157600 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
LMCD1-201ENST00000157600 C8orf17Q9NRJ1 99 aa8.28□□□□□ -1.08
LMCD1-201ENST00000157600 FAM168BA1KXE4 195 aa8.28□□□□□ -1.08
LMCD1-201ENST00000157600 A0A096LNT2 108 aa8.27□□□□□ -1.09
LMCD1-201ENST00000157600 Q8N377 158 aa8.27□□□□□ -1.09
LMCD1-201ENST00000157600 TRANK1O15050 2925 aa8.26□□□□□ -1.09
LMCD1-201ENST00000157600 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
LMCD1-201ENST00000157600 C9orf163Q8N9P6 203 aa8.26□□□□□ -1.09
LMCD1-201ENST00000157600 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
LMCD1-201ENST00000157600 GIG44P09565 113 aaPredicted RBP8.24□□□□□ -1.09
LMCD1-201ENST00000157600 H7BZZ5 65 aa8.23□□□□□ -1.09
LMCD1-201ENST00000157600 C9orf129Q5T035 196 aaKnown RBP8.23□□□□□ -1.09
LMCD1-201ENST00000157600 TEP1Q99973 2627 aaKnown RBP8.22□□□□□ -1.09
LMCD1-201ENST00000157600 OBSCN-AS1Q96MR7 158 aa8.22□□□□□ -1.09
LMCD1-201ENST00000157600 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
LMCD1-201ENST00000157600 C5orf42Q9H799 3197 aa8.21□□□□□ -1.1
LMCD1-201ENST00000157600 IGLV5-48A0A075B6I7 105 aa8.2□□□□□ -1.1
LMCD1-201ENST00000157600 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
LMCD1-201ENST00000157600 CD164Q04900 197 aa8.19□□□□□ -1.1
LMCD1-201ENST00000157600 LINC00336Q6ZUF6 198 aa8.19□□□□□ -1.1
LMCD1-201ENST00000157600 K7EIL1 84 aa8.19□□□□□ -1.1
LMCD1-201ENST00000157600 A0A087WTM6 91 aa8.18□□□□□ -1.1
LMCD1-201ENST00000157600 COL6A5A8TX70 2615 aa8.17□□□□□ -1.1
LMCD1-201ENST00000157600 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
LMCD1-201ENST00000157600 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
LMCD1-201ENST00000157600 MAP1AP78559 2803 aaPredicted RBP8.16□□□□□ -1.1
LMCD1-201ENST00000157600 A8MUN3 132 aa8.16□□□□□ -1.1
LMCD1-201ENST00000157600 ITPR2Q14571 2701 aa8.15□□□□□ -1.1
LMCD1-201ENST00000157600 SPRR4Q96PI1 79 aa8.15□□□□□ -1.1
LMCD1-201ENST00000157600 IGLV8-61A0A075B6I0 122 aa8.15□□□□□ -1.1
LMCD1-201ENST00000157600 IGLV7-43P04211 117 aa8.15□□□□□ -1.1
LMCD1-201ENST00000157600 EIF4EBP3O60516 100 aaPredicted RBP8.14□□□□□ -1.11
LMCD1-201ENST00000157600 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
LMCD1-201ENST00000157600 STAB2Q8WWQ8 2551 aa8.13□□□□□ -1.11
LMCD1-201ENST00000157600 CHD7Q9P2D1 2997 aa8.12□□□□□ -1.11
LMCD1-201ENST00000157600 RBM12B-AS1Q9P1G2 102 aa8.11□□□□□ -1.11
LMCD1-201ENST00000157600 ZNF575Q86XF7 245 aa8.11□□□□□ -1.11
LMCD1-201ENST00000157600 PCNTO95613 3336 aa8.11□□□□□ -1.11
LMCD1-201ENST00000157600 DSCR10P59022 87 aa8.11□□□□□ -1.11
LMCD1-201ENST00000157600 Q1T7F1 81 aa8.1□□□□□ -1.11
LMCD1-201ENST00000157600 J3QL48 77 aa8.09□□□□□ -1.11
LMCD1-201ENST00000157600 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
LMCD1-201ENST00000157600 FAM104AQ969W3 186 aa8.08□□□□□ -1.12
LMCD1-201ENST00000157600 SETXQ7Z333 2677 aaKnown RBP8.08□□□□□ -1.12
LMCD1-201ENST00000157600 CDC42SE1Q9NRR8 79 aa8.08□□□□□ -1.12
LMCD1-201ENST00000157600 WIPF1O43516 503 aa8.07□□□□□ -1.12
LMCD1-201ENST00000157600 CFAP54Q96N23 3096 aa8.07□□□□□ -1.12
LMCD1-201ENST00000157600 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
LMCD1-201ENST00000157600 A0A0C4DFX4 3053 aa8.06□□□□□ -1.12
LMCD1-201ENST00000157600 UTRNP46939 3433 aa8.05□□□□□ -1.12
LMCD1-201ENST00000157600 A0A1W2PNM2 257 aa8.05□□□□□ -1.12
LMCD1-201ENST00000157600 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
LMCD1-201ENST00000157600 APLNQ9ULZ1 77 aa8.05□□□□□ -1.12
LMCD1-201ENST00000157600 FAM229BQ4G0N7 80 aa8.04□□□□□ -1.12
LMCD1-201ENST00000157600 LCA10Q71F78 164 aa8.04□□□□□ -1.12
LMCD1-201ENST00000157600 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
LMCD1-201ENST00000157600 MGAQ8IWI9 3026 aa8.01□□□□□ -1.13
LMCD1-201ENST00000157600 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
LMCD1-201ENST00000157600 NSD1Q96L73 2696 aaPredicted RBP8□□□□□ -1.13
LMCD1-201ENST00000157600 KRTAP10-3P60369 221 aa8□□□□□ -1.13
LMCD1-201ENST00000157600 KRTAP1-3Q8IUG1 177 aa7.99□□□□□ -1.13
LMCD1-201ENST00000157600 LAMA2P24043 3122 aaKnown RBP7.99□□□□□ -1.13
LMCD1-201ENST00000157600 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
LMCD1-201ENST00000157600 CHD9Q3L8U1 2897 aa7.96□□□□□ -1.14
LMCD1-201ENST00000157600 Q75L30 129 aa7.95□□□□□ -1.14
LMCD1-201ENST00000157600 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
LMCD1-201ENST00000157600 KRTAP1-1Q07627 177 aa7.93□□□□□ -1.14
LMCD1-201ENST00000157600 IGSF10Q6WRI0 2623 aa7.93□□□□□ -1.14
LMCD1-201ENST00000157600 DSPP15924 2871 aaKnown RBP7.93□□□□□ -1.14
LMCD1-201ENST00000157600 LUZP6Q538Z0 58 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms