RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 C1orf195Q5TG92 126 aa12.6□□□□□ -0.39
MBD3-201ENST00000156825 CDH23Q9H251 3354 aa12.59□□□□□ -0.39
MBD3-201ENST00000156825 TEX15Q9BXT5 2789 aa12.58□□□□□ -0.4
MBD3-201ENST00000156825 C19orf73Q9NVV2 129 aa12.57□□□□□ -0.4
MBD3-201ENST00000156825 TYMSOSQ8TAI1 123 aa12.54□□□□□ -0.4
MBD3-201ENST00000156825 TM2D3Q9BRN9 247 aa12.54□□□□□ -0.4
MBD3-201ENST00000156825 C7orf65Q6ZTY9 151 aa12.54□□□□□ -0.4
MBD3-201ENST00000156825 IGLV6-57P01721 117 aa12.53□□□□□ -0.4
MBD3-201ENST00000156825 BCE1O60756 84 aa12.51□□□□□ -0.41
MBD3-201ENST00000156825 WWC2-AS2Q96NR7 200 aa12.51□□□□□ -0.41
MBD3-201ENST00000156825 LOC110117498A0A087WWA1 95 aa12.5□□□□□ -0.41
MBD3-201ENST00000156825 A0A0G2JQZ4 141 aa12.5□□□□□ -0.41
MBD3-201ENST00000156825 A0A1W2PNN7 141 aa12.5□□□□□ -0.41
MBD3-201ENST00000156825 FAM229AH3BQW9 127 aa12.48□□□□□ -0.41
MBD3-201ENST00000156825 DSPP15924 2871 aaKnown RBP12.47□□□□□ -0.41
MBD3-201ENST00000156825 C15orf56Q8N910 161 aa12.47□□□□□ -0.41
MBD3-201ENST00000156825 ZNF292O60281 2723 aa12.46□□□□□ -0.41
MBD3-201ENST00000156825 LINC00313P59037 77 aa12.46□□□□□ -0.42
MBD3-201ENST00000156825 SPAG11AQ6PDA7 123 aa12.45□□□□□ -0.42
MBD3-201ENST00000156825 TRBV7-4A0A0J9YYF1 115 aa12.45□□□□□ -0.42
MBD3-201ENST00000156825 IGLV1-50A0A075B6I6 118 aa12.45□□□□□ -0.42
MBD3-201ENST00000156825 KRTAP1-3Q8IUG1 177 aa12.45□□□□□ -0.42
MBD3-201ENST00000156825 PRR34Q9NV39 138 aa12.44□□□□□ -0.42
MBD3-201ENST00000156825 TP53AIP1Q9HCN2 124 aa12.44□□□□□ -0.42
MBD3-201ENST00000156825 K7EQZ3 153 aa12.43□□□□□ -0.42
MBD3-201ENST00000156825 PLA2G1BP04054 148 aaKnown RBP12.43□□□□□ -0.42
MBD3-201ENST00000156825 VPS13AQ96RL7 3174 aa12.43□□□□□ -0.42
MBD3-201ENST00000156825 TRAV22A0A0B4J277 110 aa12.42□□□□□ -0.42
MBD3-201ENST00000156825 TRANK1O15050 2925 aa12.41□□□□□ -0.42
MBD3-201ENST00000156825 LINC00528Q8N1L1 170 aa12.41□□□□□ -0.42
MBD3-201ENST00000156825 IGLV8-61A0A075B6I0 122 aa12.41□□□□□ -0.42
MBD3-201ENST00000156825 CASC10Q5T4H9 136 aa12.41□□□□□ -0.42
MBD3-201ENST00000156825 Q96NJ1 140 aa12.41□□□□□ -0.42
MBD3-201ENST00000156825 C9orf129Q5T035 196 aaKnown RBP12.4□□□□□ -0.42
MBD3-201ENST00000156825 COL6A5A8TX70 2615 aa12.4□□□□□ -0.42
MBD3-201ENST00000156825 ANAPC11Q9NYG5 84 aa12.4□□□□□ -0.42
MBD3-201ENST00000156825 KCNQ1DNQ9H478 68 aa12.4□□□□□ -0.42
MBD3-201ENST00000156825 A0A1B0GU69 56 aa12.39□□□□□ -0.43
MBD3-201ENST00000156825 CELSR3Q9NYQ7 3312 aa12.38□□□□□ -0.43
MBD3-201ENST00000156825 KRTAP1-1Q07627 177 aa12.38□□□□□ -0.43
MBD3-201ENST00000156825 A0A1B0GW54 56 aa12.38□□□□□ -0.43
MBD3-201ENST00000156825 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
MBD3-201ENST00000156825 FREM2Q5SZK8 3169 aa12.37□□□□□ -0.43
MBD3-201ENST00000156825 SMR3BP02814 79 aaPredicted RBP12.37□□□□□ -0.43
MBD3-201ENST00000156825 ACYP2P14621 99 aa12.36□□□□□ -0.43
MBD3-201ENST00000156825 C4orf26Q17RF5 130 aa12.34□□□□□ -0.43
MBD3-201ENST00000156825 IGFL1Q6UW32 110 aa12.34□□□□□ -0.43
MBD3-201ENST00000156825 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
MBD3-201ENST00000156825 Q8N377 158 aa12.32□□□□□ -0.44
MBD3-201ENST00000156825 A8MWP4 228 aa12.31□□□□□ -0.44
MBD3-201ENST00000156825 NBEAL1Q6ZS30 2694 aa12.31□□□□□ -0.44
MBD3-201ENST00000156825 A0A087WTM6 91 aa12.3□□□□□ -0.44
MBD3-201ENST00000156825 DNAH14Q0VDD8 3507 aa12.28□□□□□ -0.44
MBD3-201ENST00000156825 GCN1Q92616 2671 aaKnown RBP12.27□□□□□ -0.45
MBD3-201ENST00000156825 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.45
MBD3-201ENST00000156825 DSCR10P59022 87 aa12.27□□□□□ -0.45
MBD3-201ENST00000156825 C9orf163Q8N9P6 203 aa12.26□□□□□ -0.45
MBD3-201ENST00000156825 ERC2-IT1O76042 136 aa12.25□□□□□ -0.45
MBD3-201ENST00000156825 MRPL34Q9BQ48 92 aaKnown RBP12.25□□□□□ -0.45
MBD3-201ENST00000156825 ZNF861PO60384 105 aa12.24□□□□□ -0.45
MBD3-201ENST00000156825 SZT2Q5T011 3432 aa12.23□□□□□ -0.45
MBD3-201ENST00000156825 ATP11AUNQ6ZP68 121 aa12.22□□□□□ -0.45
MBD3-201ENST00000156825 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
MBD3-201ENST00000156825 FRYQ5TBA9 3013 aa12.21□□□□□ -0.45
MBD3-201ENST00000156825 C9orf92A6NGG3 77 aa12.21□□□□□ -0.45
MBD3-201ENST00000156825 VCANP13611 3396 aa12.21□□□□□ -0.45
MBD3-201ENST00000156825 H3BPC8 53 aa12.21□□□□□ -0.46
MBD3-201ENST00000156825 ZNF575Q86XF7 245 aa12.21□□□□□ -0.46
MBD3-201ENST00000156825 OBSCN-AS1Q96MR7 158 aa12.2□□□□□ -0.46
MBD3-201ENST00000156825 J3QL48 77 aa12.19□□□□□ -0.46
MBD3-201ENST00000156825 PSORS1C2Q9UIG4 136 aa12.18□□□□□ -0.46
MBD3-201ENST00000156825 APLNQ9ULZ1 77 aa12.17□□□□□ -0.46
MBD3-201ENST00000156825 CR1P17927 2039 aa12.17□□□□□ -0.46
MBD3-201ENST00000156825 PRR15Q8IV56 129 aa12.17□□□□□ -0.46
MBD3-201ENST00000156825 C8orf17Q9NRJ1 99 aa12.16□□□□□ -0.46
MBD3-201ENST00000156825 NBEAL2Q6ZNJ1 2754 aa12.16□□□□□ -0.46
MBD3-201ENST00000156825 LOC101927531A0A1B0GV80 90 aa12.15□□□□□ -0.46
MBD3-201ENST00000156825 LINC00304Q8N9R0 145 aa12.14□□□□□ -0.47
MBD3-201ENST00000156825 PRO0628Q9UI54 55 aa12.14□□□□□ -0.47
MBD3-201ENST00000156825 TLX1NBP0CAT3 122 aa12.13□□□□□ -0.47
MBD3-201ENST00000156825 C8orf87E5RJ46 101 aa12.13□□□□□ -0.47
MBD3-201ENST00000156825 RPS28P62857 69 aaKnown RBP12.12□□□□□ -0.47
MBD3-201ENST00000156825 A8MUN3 132 aa12.11□□□□□ -0.47
MBD3-201ENST00000156825 COA5Q86WW8 74 aa12.11□□□□□ -0.47
MBD3-201ENST00000156825 A0A1W2PNM2 257 aa12.1□□□□□ -0.47
MBD3-201ENST00000156825 A0A1B0GVX0 72 aa12.09□□□□□ -0.47
MBD3-201ENST00000156825 SSBP3-AS1Q7Z2R9 100 aa12.09□□□□□ -0.47
MBD3-201ENST00000156825 IGLV7-43P04211 117 aa12.09□□□□□ -0.47
MBD3-201ENST00000156825 LINC01600Q96MT4 127 aa12.08□□□□□ -0.48
MBD3-201ENST00000156825 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
MBD3-201ENST00000156825 LAMA1P25391 3075 aa12.07□□□□□ -0.48
MBD3-201ENST00000156825 TACC2O95359 2948 aa12.07□□□□□ -0.48
MBD3-201ENST00000156825 REV3LO60673 3130 aa12.06□□□□□ -0.48
MBD3-201ENST00000156825 PLA2G2DQ9UNK4 145 aa12.06□□□□□ -0.48
MBD3-201ENST00000156825 SPRR4Q96PI1 79 aa12.04□□□□□ -0.48
MBD3-201ENST00000156825 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
MBD3-201ENST00000156825 CNBPP62633 177 aaKnown RBP12.03□□□□□ -0.48
MBD3-201ENST00000156825 DMXL2Q8TDJ6 3036 aa12.03□□□□□ -0.48
MBD3-201ENST00000156825 TNP2Q05952 138 aa12.03□□□□□ -0.48
MBD3-201ENST00000156825 COX6B2Q6YFQ2 88 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms