RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SPAG11AQ6PDA7 123 aa15.24■□□□□ 0.03
TARBP1-201ENST00000040877 ZNF861PO60384 105 aa15.23■□□□□ 0.03
TARBP1-201ENST00000040877 Q96NJ1 140 aa15.23■□□□□ 0.03
TARBP1-201ENST00000040877 MRPL34Q9BQ48 92 aaKnown RBP15.23■□□□□ 0.03
TARBP1-201ENST00000040877 ATP11AUNQ6ZP68 121 aa15.22■□□□□ 0.03
TARBP1-201ENST00000040877 ERC2-IT1O76042 136 aa15.21■□□□□ 0.03
TARBP1-201ENST00000040877 C9orf129Q5T035 196 aaKnown RBP15.21■□□□□ 0.02
TARBP1-201ENST00000040877 MGAM2Q2M2H8 2515 aa15.2■□□□□ 0.02
TARBP1-201ENST00000040877 PRRC2CQ9Y520 2896 aaKnown RBP15.2■□□□□ 0.02
TARBP1-201ENST00000040877 IGFL1Q6UW32 110 aa15.18■□□□□ 0.02
TARBP1-201ENST00000040877 EIF4EBP3O60516 100 aaPredicted RBP15.17■□□□□ 0.02
TARBP1-201ENST00000040877 USP24Q9UPU5 2620 aa15.17■□□□□ 0.02
TARBP1-201ENST00000040877 K7EQZ3 153 aa15.16■□□□□ 0.02
TARBP1-201ENST00000040877 CNBPP62633 177 aaKnown RBP15.14■□□□□ 0.01
TARBP1-201ENST00000040877 APLNQ9ULZ1 77 aa15.14■□□□□ 0.01
TARBP1-201ENST00000040877 LINC00336Q6ZUF6 198 aa15.12■□□□□ 0.01
TARBP1-201ENST00000040877 Q8N377 158 aa15.12■□□□□ 0.01
TARBP1-201ENST00000040877 KLKP1Q107X0 134 aa15.11■□□□□ 0.01
TARBP1-201ENST00000040877 J3QL48 77 aa15.1■□□□□ 0.01
TARBP1-201ENST00000040877 LINC00304Q8N9R0 145 aa15.1■□□□□ 0.01
TARBP1-201ENST00000040877 A8MUN3 132 aa15.1■□□□□ 0.01
TARBP1-201ENST00000040877 PRR15Q8IV56 129 aa15.1■□□□□ 0.01
TARBP1-201ENST00000040877 ZNF575Q86XF7 245 aa15.08■□□□□ 0
TARBP1-201ENST00000040877 CEP350Q5VT06 3117 aa15.07■□□□□ 0
TARBP1-201ENST00000040877 C8orf17Q9NRJ1 99 aa15.07■□□□□ 0
TARBP1-201ENST00000040877 A0A1B0GVX0 72 aa15.04■□□□□ -0
TARBP1-201ENST00000040877 FLNAP21333 2647 aaKnown RBP15.03■□□□□ -0
TARBP1-201ENST00000040877 IGLV7-43P04211 117 aa15.03■□□□□ -0
TARBP1-201ENST00000040877 H7BZZ5 65 aa15.02□□□□□ -0.01
TARBP1-201ENST00000040877 DNAH12Q6ZR08 3092 aa14.99□□□□□ -0.01
TARBP1-201ENST00000040877 CYP4F30PQ9H0H9 118 aa14.99□□□□□ -0.01
TARBP1-201ENST00000040877 IGLV5-37A0A075B6J1 123 aa14.98□□□□□ -0.01
TARBP1-201ENST00000040877 HELZ2Q9BYK8 2649 aaKnown RBP14.98□□□□□ -0.01
TARBP1-201ENST00000040877 A0A1W2PNN7 141 aa14.98□□□□□ -0.01
TARBP1-201ENST00000040877 PSORS1C2Q9UIG4 136 aa14.96□□□□□ -0.01
TARBP1-201ENST00000040877 SPRR4Q96PI1 79 aa14.96□□□□□ -0.02
TARBP1-201ENST00000040877 DSCR10P59022 87 aa14.95□□□□□ -0.02
TARBP1-201ENST00000040877 WIPF1O43516 503 aa14.94□□□□□ -0.02
TARBP1-201ENST00000040877 COA5Q86WW8 74 aa14.94□□□□□ -0.02
TARBP1-201ENST00000040877 CASC10Q5T4H9 136 aa14.93□□□□□ -0.02
TARBP1-201ENST00000040877 ITPR3Q14573 2671 aa14.93□□□□□ -0.02
TARBP1-201ENST00000040877 OBSCN-AS1Q96MR7 158 aa14.87□□□□□ -0.03
TARBP1-201ENST00000040877 IGLV8-61A0A075B6I0 122 aa14.85□□□□□ -0.03
TARBP1-201ENST00000040877 MAST4O15021 2626 aa14.85□□□□□ -0.03
TARBP1-201ENST00000040877 ATRQ13535 2644 aa14.85□□□□□ -0.03
TARBP1-201ENST00000040877 CD164Q04900 197 aa14.84□□□□□ -0.03
TARBP1-201ENST00000040877 SMR3BP02814 79 aaPredicted RBP14.84□□□□□ -0.03
TARBP1-201ENST00000040877 IGLV5-48A0A075B6I7 105 aa14.82□□□□□ -0.04
TARBP1-201ENST00000040877 A0A1W2PNM2 257 aa14.82□□□□□ -0.04
TARBP1-201ENST00000040877 PCNTO95613 3336 aa14.81□□□□□ -0.04
TARBP1-201ENST00000040877 LINC01600Q96MT4 127 aa14.8□□□□□ -0.04
TARBP1-201ENST00000040877 COX6B2Q6YFQ2 88 aa14.8□□□□□ -0.04
TARBP1-201ENST00000040877 ANAPC11Q9NYG5 84 aa14.79□□□□□ -0.04
TARBP1-201ENST00000040877 A0A0G2JQZ4 141 aa14.78□□□□□ -0.04
TARBP1-201ENST00000040877 UQCR11O14957 56 aa14.76□□□□□ -0.05
TARBP1-201ENST00000040877 BPTFQ12830 3046 aa14.76□□□□□ -0.05
TARBP1-201ENST00000040877 C9orf92A6NGG3 77 aa14.75□□□□□ -0.05
TARBP1-201ENST00000040877 CFAP46Q8IYW2 2715 aa14.73□□□□□ -0.05
TARBP1-201ENST00000040877 KTN1-AS1Q86SY8 53 aa14.72□□□□□ -0.05
TARBP1-201ENST00000040877 TNP2Q05952 138 aa14.68□□□□□ -0.06
TARBP1-201ENST00000040877 CHD7Q9P2D1 2997 aa14.66□□□□□ -0.06
TARBP1-201ENST00000040877 SPINT4Q6UDR6 99 aa14.65□□□□□ -0.06
TARBP1-201ENST00000040877 RBM12B-AS1Q9P1G2 102 aa14.64□□□□□ -0.07
TARBP1-201ENST00000040877 SPANXA2-OT1Q8N9U9 137 aa14.63□□□□□ -0.07
TARBP1-201ENST00000040877 FAM104AQ969W3 186 aa14.63□□□□□ -0.07
TARBP1-201ENST00000040877 MIR22HGQ0VDD5 57 aa14.6□□□□□ -0.07
TARBP1-201ENST00000040877 LCA10Q71F78 164 aa14.6□□□□□ -0.07
TARBP1-201ENST00000040877 FAM229BQ4G0N7 80 aa14.56□□□□□ -0.08
TARBP1-201ENST00000040877 CENPEQ02224 2701 aa14.55□□□□□ -0.08
TARBP1-201ENST00000040877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.54□□□□□ -0.08
TARBP1-201ENST00000040877 CR1P17927 2039 aa14.54□□□□□ -0.08
TARBP1-201ENST00000040877 CHD9Q3L8U1 2897 aa14.52□□□□□ -0.09
TARBP1-201ENST00000040877 RANBP2P49792 3224 aaKnown RBP14.49□□□□□ -0.09
TARBP1-201ENST00000040877 PLAC8Q9NZF1 115 aa14.49□□□□□ -0.09
TARBP1-201ENST00000040877 OCR1Q9BZK8 76 aa14.49□□□□□ -0.09
TARBP1-201ENST00000040877 CDC42SE1Q9NRR8 79 aa14.48□□□□□ -0.09
TARBP1-201ENST00000040877 Q1T7F1 81 aa14.47□□□□□ -0.09
TARBP1-201ENST00000040877 SPRR1AP35321 89 aa14.44□□□□□ -0.1
TARBP1-201ENST00000040877 ZNF292O60281 2723 aa14.43□□□□□ -0.1
TARBP1-201ENST00000040877 Q5XG85 94 aa14.42□□□□□ -0.1
TARBP1-201ENST00000040877 CRIPTQ9P021 101 aa14.39□□□□□ -0.11
TARBP1-201ENST00000040877 STAB1Q9NY15 2570 aa14.38□□□□□ -0.11
TARBP1-201ENST00000040877 PRR26Q8N8Z3 221 aa14.37□□□□□ -0.11
TARBP1-201ENST00000040877 Q8N1X5 172 aa14.36□□□□□ -0.11
TARBP1-201ENST00000040877 IGLV7-46A0A075B6I9 117 aa14.35□□□□□ -0.11
TARBP1-201ENST00000040877 CYSTM1Q9H1C7 97 aa14.35□□□□□ -0.11
TARBP1-201ENST00000040877 Q6ZSA8 131 aa14.33□□□□□ -0.12
TARBP1-201ENST00000040877 SPRR1BP22528 89 aa14.33□□□□□ -0.12
TARBP1-201ENST00000040877 C5orf42Q9H799 3197 aa14.31□□□□□ -0.12
TARBP1-201ENST00000040877 A0A0C4DFX4 3053 aa14.29□□□□□ -0.12
TARBP1-201ENST00000040877 MKI67P46013 3256 aaKnown RBP14.28□□□□□ -0.12
TARBP1-201ENST00000040877 FP248Q71RG6 208 aaPredicted RBP14.28□□□□□ -0.12
TARBP1-201ENST00000040877 LAMA3Q16787 3333 aa14.27□□□□□ -0.13
TARBP1-201ENST00000040877 TRANK1O15050 2925 aa14.26□□□□□ -0.13
TARBP1-201ENST00000040877 Q8NDZ9 215 aa14.25□□□□□ -0.13
TARBP1-201ENST00000040877 TEP1Q99973 2627 aaKnown RBP14.22□□□□□ -0.13
TARBP1-201ENST00000040877 BRCA2P51587 3418 aa14.21□□□□□ -0.13
TARBP1-201ENST00000040877 MMP24-AS1A0A0U1RRL7 71 aa14.21□□□□□ -0.14
TARBP1-201ENST00000040877 HTTP42858 3142 aa14.2□□□□□ -0.14
TARBP1-201ENST00000040877 TEX15Q9BXT5 2789 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms