RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Amn1B8JKV0 258 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ypel3P61237 119 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Tmem11Q8BK08 190 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Olfr873Q8VFJ0 319 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 V1ra8Q9EQ48 279 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Tmem183Q9JJB9 375 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 C2cd3Q52KB6 2323 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 BC067074F6RXI4 2391 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm6904E9PVF1 202 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm10020E9QAZ2 204 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 1700056E22RikF7CNM6 234 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Atp6v0cP63082 155 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Smim6Q3U0I6 56 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Smim9Q3V0X1 137 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 H2al1nQ497L1 109 aa11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 Rpl15Q9CZM2 204 aaKnown RBP11.5□□□□□ -0.57
Nup88-202ENSMUST00000108530 BsnO88737 3942 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ighv1-4A0A075B5T4 117 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ighv1-15A0A0A6YXA5 117 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Vmn1r232A2RTT5 351 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm21900J3QP38 180 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 P01820 115 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Vamp3P63024 103 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Tpt1P63028 172 aaKnown RBP11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 SnrpcQ62241 159 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 SmagpQ99KC7 97 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ank2Q8C8R3 3898 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm10036E9PYL9 178 aaKnown RBP11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm12169F2Z474 250 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Aqp7O54794 303 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Btf3Q64152 204 aaKnown RBP11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Olfr1339Q8VGB1 315 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Scgb1b27Q91WB5 92 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Zfp53Q9Z117 652 aa11.49□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ighv1-77A0A0G2JGS9 117 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm44501A8R0T9 150 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm5294J3QP53 216 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Rab24P35290 203 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Prima1Q810F0 153 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 5930422O12RikQ8C4Y4 123 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gatad1Q920S3 266 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Higd1bQ99JY6 98 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 1700008P02RikQ9DAJ8 175 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Cep192E9Q4Y4 2514 aaKnown RBP11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Olfr1369-ps1A0A140T8K7 317 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm21994F6T2D2 329 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ebi3O35228 228 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Mfge8P21956 463 aaKnown RBP11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 5730522E02RikQ5SP45 163 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Olfr148Q60887 310 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Necap1Q9CR95 275 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Lyg1Q9D7Q0 197 aa11.48□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm10203F6QJ09 66 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ins2P01326 110 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ang2Q64438 145 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Kcnip4Q6PHZ8 250 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Mgst1Q91VS7 155 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Prrc2aQ7TSC1 2158 aaKnown RBP11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm6525A0A0A6YW33 106 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Fabp4P04117 132 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm10334Q792Y8 246 aa11.47□□□□□ -0.57
Nup88-202ENSMUST00000108530 D830044I16RikA0A1D5RM53 117 aa11.46□□□□□ -0.57
Nup88-202ENSMUST00000108530 Gm10521E9PZK0 135 aa11.46□□□□□ -0.57
Nup88-202ENSMUST00000108530 Ascl2O35885 263 aa11.46□□□□□ -0.57
Nup88-202ENSMUST00000108530 CebpgP53568 150 aa11.46□□□□□ -0.57
Nup88-202ENSMUST00000108530 MtorQ9JLN9 2549 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 Scgb1b10A0A087WPW0 93 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 A0A286YCQ8 80 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 Ube2g1P62254 170 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr150Q60895 312 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 Arl11Q6P3A9 176 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 Samd10Q7TST3 202 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 Q9CX63 252 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 IcosQ9WVS0 200 aa11.46□□□□□ -0.58
Nup88-202ENSMUST00000108530 Ighv1-74A0A0G2JGK2 117 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Slc35b1P97858 322 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 SelplgQ62170 397 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm5468Q8C3D3 155 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 D630044L22RikQ8C701 164 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 TirapQ99JY1 241 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Rif1Q6PR54 2419 aaKnown RBP11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Sprr3O09116 238 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Obox7Q4KL20 218 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Smim7Q5RKS2 75 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Hist2h2beQ64524 126 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Rasl11bQ922H7 247 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Cxcl14Q9WUQ5 99 aa11.45□□□□□ -0.58
Nup88-202ENSMUST00000108530 Chd9Q8BYH8 2885 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 CrygbP04344 175 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 Txn2P97493 166 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 Gm10775Q3V290 127 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 Fa2hQ5MPP0 372 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 Znf641Q8BZ34 422 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 PgpQ8CHP8 321 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 Mettl26Q9DCS2 204 aa11.44□□□□□ -0.58
Nup88-202ENSMUST00000108530 Igkv4-90A0A075B5L3 117 aa11.43□□□□□ -0.58
Nup88-202ENSMUST00000108530 Psg18B2RSG7 476 aa11.43□□□□□ -0.58
Nup88-202ENSMUST00000108530 Zfp983E9PUT0 460 aa11.43□□□□□ -0.58
Nup88-202ENSMUST00000108530 IqcjQ8BPW0 110 aa11.43□□□□□ -0.58
Nup88-202ENSMUST00000108530 Olfr810Q8VFH9 312 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms