RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SPANXB1Q9NS25 103 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-230ENST00000641927 HINT1P49773 126 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-230ENST00000641927 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
PHGDH-230ENST00000641927 Q6ZVH6 145 aa11.18□□□□□ -0.62
PHGDH-230ENST00000641927 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
PHGDH-230ENST00000641927 BATFQ16520 125 aa11.17□□□□□ -0.62
PHGDH-230ENST00000641927 TAL2Q16559 108 aa11.17□□□□□ -0.62
PHGDH-230ENST00000641927 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
PHGDH-230ENST00000641927 LINC00474Q9P2X8 69 aa11.17□□□□□ -0.62
PHGDH-230ENST00000641927 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
PHGDH-230ENST00000641927 KRTAP10-1P60331 282 aa11.16□□□□□ -0.62
PHGDH-230ENST00000641927 BVES-AS1Q5T3Y7 98 aa11.16□□□□□ -0.62
PHGDH-230ENST00000641927 SOSTDC1Q6X4U4 206 aa11.16□□□□□ -0.62
PHGDH-230ENST00000641927 MUSTN1Q8IVN3 82 aa11.16□□□□□ -0.62
PHGDH-230ENST00000641927 COPS9Q8WXC6 57 aa11.16□□□□□ -0.62
PHGDH-230ENST00000641927 PKHD1P08F94 4074 aa11.16□□□□□ -0.62
PHGDH-230ENST00000641927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-230ENST00000641927 DNAH5Q8TE73 4624 aa11.15□□□□□ -0.62
PHGDH-230ENST00000641927 PANO1I0J062 215 aa11.14□□□□□ -0.63
PHGDH-230ENST00000641927 IFITM1P13164 125 aa11.14□□□□□ -0.63
PHGDH-230ENST00000641927 FAM168BA1KXE4 195 aa11.13□□□□□ -0.63
PHGDH-230ENST00000641927 FAM19A5Q7Z5A7 132 aaPredicted RBP11.12□□□□□ -0.63
PHGDH-230ENST00000641927 CEND1Q8N111 149 aa11.12□□□□□ -0.63
PHGDH-230ENST00000641927 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
PHGDH-230ENST00000641927 LOC107984156A0A0G2JMH3 177 aa11.11□□□□□ -0.63
PHGDH-230ENST00000641927 RPL24P83731 157 aaKnown RBP11.11□□□□□ -0.63
PHGDH-230ENST00000641927 ARL17AQ8IVW1 177 aa11.11□□□□□ -0.63
PHGDH-230ENST00000641927 COL5A1-AS1Q5SY13 56 aa11.1□□□□□ -0.63
PHGDH-230ENST00000641927 SERTAD4-AS1Q5TG53 156 aa11.1□□□□□ -0.63
PHGDH-230ENST00000641927 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
PHGDH-230ENST00000641927 PRR3P79522 188 aaKnown RBP11.09□□□□□ -0.63
PHGDH-230ENST00000641927 Q8NDZ9 215 aa11.09□□□□□ -0.63
PHGDH-230ENST00000641927 A0A1W2PNN7 141 aa11.08□□□□□ -0.64
PHGDH-230ENST00000641927 A0A087WYN8 130 aa11.08□□□□□ -0.64
PHGDH-230ENST00000641927 A4D1N5 150 aa11.08□□□□□ -0.64
PHGDH-230ENST00000641927 A6NDN8 102 aa11.08□□□□□ -0.64
PHGDH-230ENST00000641927 NCR3O14931 201 aa11.08□□□□□ -0.64
PHGDH-230ENST00000641927 FXYD2P54710 66 aa11.08□□□□□ -0.64
PHGDH-230ENST00000641927 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
PHGDH-230ENST00000641927 VPREB1P12018 145 aa11.07□□□□□ -0.64
PHGDH-230ENST00000641927 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
PHGDH-230ENST00000641927 PLA2G2DQ9UNK4 145 aa11.07□□□□□ -0.64
PHGDH-230ENST00000641927 NDUFC2O95298 119 aa11.06□□□□□ -0.64
PHGDH-230ENST00000641927 Q6ZSA8 131 aa11.05□□□□□ -0.64
PHGDH-230ENST00000641927 KRTAP7-1Q8IUC3 87 aa11.05□□□□□ -0.64
PHGDH-230ENST00000641927 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
PHGDH-230ENST00000641927 A6NJY4 79 aa11.04□□□□□ -0.64
PHGDH-230ENST00000641927 M0QXV9 152 aa11.04□□□□□ -0.64
PHGDH-230ENST00000641927 HAMPP81172 84 aa11.04□□□□□ -0.64
PHGDH-230ENST00000641927 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
PHGDH-230ENST00000641927 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
PHGDH-230ENST00000641927 SCXQ7RTU7 201 aa11.02□□□□□ -0.64
PHGDH-230ENST00000641927 CIRBP-AS1Q8TBR5 109 aa11.02□□□□□ -0.64
PHGDH-230ENST00000641927 PLAC8Q9NZF1 115 aa11.02□□□□□ -0.64
PHGDH-230ENST00000641927 IGLV5-37A0A075B6J1 123 aa11.01□□□□□ -0.65
PHGDH-230ENST00000641927 IGKV2-28A0A075B6P5 120 aa11.01□□□□□ -0.65
PHGDH-230ENST00000641927 IGKV2D-28P01615 120 aa11.01□□□□□ -0.65
PHGDH-230ENST00000641927 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
PHGDH-230ENST00000641927 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
PHGDH-230ENST00000641927 M0R378 163 aa11.01□□□□□ -0.65
PHGDH-230ENST00000641927 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
PHGDH-230ENST00000641927 PHF5AQ7RTV0 110 aaKnown RBP11.01□□□□□ -0.65
PHGDH-230ENST00000641927 OR13C6PQ8NH95 151 aa11.01□□□□□ -0.65
PHGDH-230ENST00000641927 LRP1BQ9NZR2 4599 aa11.01□□□□□ -0.65
PHGDH-230ENST00000641927 DYNC1H1Q14204 4646 aaKnown RBP11□□□□□ -0.65
PHGDH-230ENST00000641927 C7orf33Q8WU49 177 aa11□□□□□ -0.65
PHGDH-230ENST00000641927 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
PHGDH-230ENST00000641927 CFC1BP0CG36 223 aa10.99□□□□□ -0.65
PHGDH-230ENST00000641927 CFC1P0CG37 223 aa10.99□□□□□ -0.65
PHGDH-230ENST00000641927 LINC00337Q8N6G1 96 aa10.99□□□□□ -0.65
PHGDH-230ENST00000641927 RAB37Q96AX2 223 aa10.99□□□□□ -0.65
PHGDH-230ENST00000641927 DNAH8Q96JB1 4490 aa10.98□□□□□ -0.65
PHGDH-230ENST00000641927 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
PHGDH-230ENST00000641927 LINC00167Q96N53 147 aa10.98□□□□□ -0.65
PHGDH-230ENST00000641927 A0A1B0GWB2 263 aa10.98□□□□□ -0.65
PHGDH-230ENST00000641927 TAX1BP3O14907 124 aa10.98□□□□□ -0.65
PHGDH-230ENST00000641927 UBE2BP63146 152 aa10.98□□□□□ -0.65
PHGDH-230ENST00000641927 TRAV13-2A0A0B4J235 113 aa10.97□□□□□ -0.65
PHGDH-230ENST00000641927 TRBV10-3A0A0K0K1G6 114 aa10.96□□□□□ -0.65
PHGDH-230ENST00000641927 EPM2AB3EWF7 344 aa10.96□□□□□ -0.65
PHGDH-230ENST00000641927 K7ERJ3 54 aa10.96□□□□□ -0.65
PHGDH-230ENST00000641927 EPPK1P58107 5090 aaKnown RBP10.96□□□□□ -0.65
PHGDH-230ENST00000641927 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
PHGDH-230ENST00000641927 TMEM126AQ9H061 195 aa10.95□□□□□ -0.66
PHGDH-230ENST00000641927 H7C2G1 150 aa10.94□□□□□ -0.66
PHGDH-230ENST00000641927 RPL13AP40429 203 aaKnown RBP10.94□□□□□ -0.66
PHGDH-230ENST00000641927 IGLV6-57P01721 117 aa10.93□□□□□ -0.66
PHGDH-230ENST00000641927 XGP55808 180 aa10.93□□□□□ -0.66
PHGDH-230ENST00000641927 PRO1854Q9UHT4 67 aa10.93□□□□□ -0.66
PHGDH-230ENST00000641927 IGLV1-50A0A075B6I6 118 aa10.92□□□□□ -0.66
PHGDH-230ENST00000641927 C9orf118A6NHY6 69 aa10.91□□□□□ -0.66
PHGDH-230ENST00000641927 Q1RN00 199 aa10.9□□□□□ -0.66
PHGDH-230ENST00000641927 TRAV23DV6A0A075B6W5 121 aa10.89□□□□□ -0.67
PHGDH-230ENST00000641927 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
PHGDH-230ENST00000641927 APOBP04114 4563 aaKnown RBP10.88□□□□□ -0.67
PHGDH-230ENST00000641927 CBY1Q9Y3M2 126 aa10.88□□□□□ -0.67
PHGDH-230ENST00000641927 H3BUT2 72 aa10.87□□□□□ -0.67
PHGDH-230ENST00000641927 SMIM11BQ8TCY0 68 aa10.87□□□□□ -0.67
PHGDH-230ENST00000641927 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
PHGDH-230ENST00000641927 PRYO14603 147 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms