RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 A0A0U1RRA0 63 aa9.64□□□□□ -0.87
PHGDH-213ENST00000641272 CBLN2Q8IUK8 224 aa9.64□□□□□ -0.87
PHGDH-213ENST00000641272 CDIP1Q9H305 208 aa9.64□□□□□ -0.87
PHGDH-213ENST00000641272 IGLV7-46A0A075B6I9 117 aa9.63□□□□□ -0.87
PHGDH-213ENST00000641272 BAGE3Q86Y29 109 aa9.63□□□□□ -0.87
PHGDH-213ENST00000641272 COX17Q14061 63 aa9.62□□□□□ -0.87
PHGDH-213ENST00000641272 RHEBQ15382 184 aa9.62□□□□□ -0.87
PHGDH-213ENST00000641272 PLEKHB2Q96CS7 222 aa9.62□□□□□ -0.87
PHGDH-213ENST00000641272 TRAPPC1Q9Y5R8 145 aa9.62□□□□□ -0.87
PHGDH-213ENST00000641272 LINC00614P0C842 121 aa9.61□□□□□ -0.87
PHGDH-213ENST00000641272 LINC00158P58513 81 aa9.61□□□□□ -0.87
PHGDH-213ENST00000641272 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
PHGDH-213ENST00000641272 TPRXLQ17RH7 258 aa9.6□□□□□ -0.87
PHGDH-213ENST00000641272 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-213ENST00000641272 SPRR4Q96PI1 79 aa9.58□□□□□ -0.88
PHGDH-213ENST00000641272 CHTOPQ9Y3Y2 248 aaKnown RBP9.58□□□□□ -0.88
PHGDH-213ENST00000641272 NCR3O14931 201 aa9.57□□□□□ -0.88
PHGDH-213ENST00000641272 C10orf91Q5T1B1 145 aa9.57□□□□□ -0.88
PHGDH-213ENST00000641272 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
PHGDH-213ENST00000641272 PPDPFQ9H3Y8 114 aa9.56□□□□□ -0.88
PHGDH-213ENST00000641272 SMIM13P0DJ93 91 aa9.55□□□□□ -0.88
PHGDH-213ENST00000641272 DAND5Q8N907 189 aa9.55□□□□□ -0.88
PHGDH-213ENST00000641272 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
PHGDH-213ENST00000641272 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
PHGDH-213ENST00000641272 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
PHGDH-213ENST00000641272 PRYO14603 147 aa9.52□□□□□ -0.89
PHGDH-213ENST00000641272 ATP6V1G1O75348 118 aa9.52□□□□□ -0.89
PHGDH-213ENST00000641272 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
PHGDH-213ENST00000641272 Q8NBF4 154 aa9.52□□□□□ -0.89
PHGDH-213ENST00000641272 ZNF706Q9Y5V0 76 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-213ENST00000641272 IFI27L1Q96BM0 104 aa9.51□□□□□ -0.89
PHGDH-213ENST00000641272 APOC3P02656 99 aa9.5□□□□□ -0.89
PHGDH-213ENST00000641272 ETDCA0A1B0GVM5 59 aa9.49□□□□□ -0.89
PHGDH-213ENST00000641272 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
PHGDH-213ENST00000641272 SPAG11AQ6PDA7 123 aa9.49□□□□□ -0.89
PHGDH-213ENST00000641272 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
PHGDH-213ENST00000641272 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
PHGDH-213ENST00000641272 H0Y8G0 127 aa9.48□□□□□ -0.89
PHGDH-213ENST00000641272 CTAG1AP78358 180 aa9.48□□□□□ -0.89
PHGDH-213ENST00000641272 SMCR5Q8TEV8 140 aa9.48□□□□□ -0.89
PHGDH-213ENST00000641272 SPRR1AP35321 89 aa9.47□□□□□ -0.89
PHGDH-213ENST00000641272 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-213ENST00000641272 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.9
PHGDH-213ENST00000641272 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
PHGDH-213ENST00000641272 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
PHGDH-213ENST00000641272 GAGE2AQ6NT46 116 aa9.45□□□□□ -0.9
PHGDH-213ENST00000641272 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
PHGDH-213ENST00000641272 CHCHD1Q96BP2 118 aaKnown RBP9.45□□□□□ -0.9
PHGDH-213ENST00000641272 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
PHGDH-213ENST00000641272 IGLV9-49A0A0B4J1Y8 123 aa9.44□□□□□ -0.9
PHGDH-213ENST00000641272 KRTAP4-16G5E9R7 235 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-213ENST00000641272 HERV-K104P63124 156 aa9.44□□□□□ -0.9
PHGDH-213ENST00000641272 MOBPQ13875 183 aa9.44□□□□□ -0.9
PHGDH-213ENST00000641272 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
PHGDH-213ENST00000641272 SNAPINO95295 136 aa9.43□□□□□ -0.9
PHGDH-213ENST00000641272 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
PHGDH-213ENST00000641272 NDUFA5Q16718 116 aa9.42□□□□□ -0.9
PHGDH-213ENST00000641272 SVBPQ8N300 66 aa9.42□□□□□ -0.9
PHGDH-213ENST00000641272 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
PHGDH-213ENST00000641272 HSBP1O75506 76 aa9.41□□□□□ -0.9
PHGDH-213ENST00000641272 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
PHGDH-213ENST00000641272 YPEL4Q96NS1 127 aa9.41□□□□□ -0.9
PHGDH-213ENST00000641272 B5MCH6 92 aa9.4□□□□□ -0.9
PHGDH-213ENST00000641272 MAP1LC3CQ9BXW4 147 aa9.4□□□□□ -0.9
PHGDH-213ENST00000641272 DDTP30046 118 aa9.39□□□□□ -0.91
PHGDH-213ENST00000641272 SPINK1P00995 79 aa9.38□□□□□ -0.91
PHGDH-213ENST00000641272 S100A12P80511 92 aa9.38□□□□□ -0.91
PHGDH-213ENST00000641272 Q9BRP9 147 aa9.38□□□□□ -0.91
PHGDH-213ENST00000641272 LINC00587B1AMM8 73 aa9.37□□□□□ -0.91
PHGDH-213ENST00000641272 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
PHGDH-213ENST00000641272 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
PHGDH-213ENST00000641272 KRTAP9-6A0A140TA67 174 aa9.36□□□□□ -0.91
PHGDH-213ENST00000641272 LEPROTO15243 131 aa9.36□□□□□ -0.91
PHGDH-213ENST00000641272 ASB16-AS1Q495Z4 193 aa9.36□□□□□ -0.91
PHGDH-213ENST00000641272 NPC2P61916 151 aa9.35□□□□□ -0.91
PHGDH-213ENST00000641272 Q6ZRX8 168 aa9.35□□□□□ -0.91
PHGDH-213ENST00000641272 Q8N377 158 aa9.35□□□□□ -0.91
PHGDH-213ENST00000641272 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
PHGDH-213ENST00000641272 J3QQQ9 107 aa9.34□□□□□ -0.91
PHGDH-213ENST00000641272 SERF1AO75920 110 aa9.34□□□□□ -0.91
PHGDH-213ENST00000641272 LEPROTL1O95214 131 aa9.34□□□□□ -0.91
PHGDH-213ENST00000641272 LINC00310P59036 64 aa9.34□□□□□ -0.91
PHGDH-213ENST00000641272 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
PHGDH-213ENST00000641272 SPANXB1Q9NS25 103 aaPredicted RBP9.34□□□□□ -0.91
PHGDH-213ENST00000641272 TRBV10-2A0A0K0K1G8 114 aa9.33□□□□□ -0.92
PHGDH-213ENST00000641272 TRGC2P03986 189 aa9.32□□□□□ -0.92
PHGDH-213ENST00000641272 S100A7L2Q5SY68 101 aa9.32□□□□□ -0.92
PHGDH-213ENST00000641272 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
PHGDH-213ENST00000641272 FABP4P15090 132 aa9.31□□□□□ -0.92
PHGDH-213ENST00000641272 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
PHGDH-213ENST00000641272 PLNP26678 52 aa9.31□□□□□ -0.92
PHGDH-213ENST00000641272 HERVK_113P61574 105 aa9.31□□□□□ -0.92
PHGDH-213ENST00000641272 LOC107984156A0A0G2JMH3 177 aa9.3□□□□□ -0.92
PHGDH-213ENST00000641272 DPM2O94777 84 aa9.3□□□□□ -0.92
PHGDH-213ENST00000641272 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
PHGDH-213ENST00000641272 SOSTDC1Q6X4U4 206 aa9.3□□□□□ -0.92
PHGDH-213ENST00000641272 SSBP3-AS1Q7Z2R9 100 aa9.3□□□□□ -0.92
PHGDH-213ENST00000641272 ARL17AQ8IVW1 177 aa9.3□□□□□ -0.92
PHGDH-213ENST00000641272 ST20-AS1Q8NBB2 130 aa9.3□□□□□ -0.92
PHGDH-213ENST00000641272 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms