RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 A4D1N5 150 aa12.76□□□□□ -0.37
PHGDH-210ENST00000641115 FUSP35637 526 aaKnown RBP eCLIP12.76□□□□□ -0.37
PHGDH-210ENST00000641115 LINC01620Q4KN68 170 aa12.76□□□□□ -0.37
PHGDH-210ENST00000641115 FRAS1Q86XX4 4008 aa12.74□□□□□ -0.37
PHGDH-210ENST00000641115 C16orf90A8MZG2 172 aa12.74□□□□□ -0.37
PHGDH-210ENST00000641115 A0A096LNI7 61 aa12.73□□□□□ -0.37
PHGDH-210ENST00000641115 PGPEP1Q9NXJ5 209 aa12.73□□□□□ -0.37
PHGDH-210ENST00000641115 KRTAP10-2P60368 255 aa12.73□□□□□ -0.37
PHGDH-210ENST00000641115 C9orf129Q5T035 196 aaKnown RBP12.73□□□□□ -0.37
PHGDH-210ENST00000641115 SDIM1Q6ZPB5 146 aa12.73□□□□□ -0.37
PHGDH-210ENST00000641115 DNAH17Q9UFH2 4485 aa12.72□□□□□ -0.37
PHGDH-210ENST00000641115 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
PHGDH-210ENST00000641115 A6NDN8 102 aa12.71□□□□□ -0.37
PHGDH-210ENST00000641115 SNHG12Q9BXW3 62 aa12.71□□□□□ -0.37
PHGDH-210ENST00000641115 NHP2Q9NX24 153 aaKnown RBP12.71□□□□□ -0.37
PHGDH-210ENST00000641115 NDUFC2O95298 119 aa12.7□□□□□ -0.38
PHGDH-210ENST00000641115 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
PHGDH-210ENST00000641115 CFC1BP0CG36 223 aa12.67□□□□□ -0.38
PHGDH-210ENST00000641115 CFC1P0CG37 223 aa12.67□□□□□ -0.38
PHGDH-210ENST00000641115 RAB37Q96AX2 223 aa12.67□□□□□ -0.38
PHGDH-210ENST00000641115 A0A0B4J2C4 111 aa12.66□□□□□ -0.38
PHGDH-210ENST00000641115 CHTF8P0CG12 524 aa12.66□□□□□ -0.38
PHGDH-210ENST00000641115 Q8NDZ9 215 aa12.66□□□□□ -0.38
PHGDH-210ENST00000641115 VPREB1P12018 145 aa12.66□□□□□ -0.38
PHGDH-210ENST00000641115 PLA2G2DQ9UNK4 145 aa12.66□□□□□ -0.38
PHGDH-210ENST00000641115 A0A1B0GWB2 263 aa12.65□□□□□ -0.38
PHGDH-210ENST00000641115 NCR3O14931 201 aa12.65□□□□□ -0.38
PHGDH-210ENST00000641115 IGKV2-28A0A075B6P5 120 aa12.64□□□□□ -0.39
PHGDH-210ENST00000641115 K7ERJ3 54 aa12.64□□□□□ -0.39
PHGDH-210ENST00000641115 IGKV2D-28P01615 120 aa12.64□□□□□ -0.39
PHGDH-210ENST00000641115 PRR3P79522 188 aaKnown RBP12.64□□□□□ -0.39
PHGDH-210ENST00000641115 NKAPP1Q8N9T2 125 aa12.64□□□□□ -0.39
PHGDH-210ENST00000641115 FAM168BA1KXE4 195 aa12.63□□□□□ -0.39
PHGDH-210ENST00000641115 SERTAD4-AS1Q5TG53 156 aa12.63□□□□□ -0.39
PHGDH-210ENST00000641115 TRAV13-2A0A0B4J235 113 aa12.62□□□□□ -0.39
PHGDH-210ENST00000641115 FAM19A5Q7Z5A7 132 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-210ENST00000641115 SPACA4Q8TDM5 124 aa12.62□□□□□ -0.39
PHGDH-210ENST00000641115 DPH3Q96FX2 82 aa12.62□□□□□ -0.39
PHGDH-210ENST00000641115 TRBV10-2A0A0K0K1G8 114 aa12.62□□□□□ -0.39
PHGDH-210ENST00000641115 A0A1B0GVY2 172 aa12.62□□□□□ -0.39
PHGDH-210ENST00000641115 PRO1854Q9UHT4 67 aa12.62□□□□□ -0.39
PHGDH-210ENST00000641115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-210ENST00000641115 COL5A1-AS1Q5SY13 56 aa12.61□□□□□ -0.39
PHGDH-210ENST00000641115 LINC00337Q8N6G1 96 aa12.61□□□□□ -0.39
PHGDH-210ENST00000641115 OR13C6PQ8NH95 151 aa12.6□□□□□ -0.39
PHGDH-210ENST00000641115 FAT2Q9NYQ8 4349 aa12.6□□□□□ -0.39
PHGDH-210ENST00000641115 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
PHGDH-210ENST00000641115 PANO1I0J062 215 aa12.59□□□□□ -0.39
PHGDH-210ENST00000641115 M0R378 163 aa12.59□□□□□ -0.39
PHGDH-210ENST00000641115 S100A7L2Q5SY68 101 aa12.59□□□□□ -0.39
PHGDH-210ENST00000641115 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
PHGDH-210ENST00000641115 A0A1W2PNN7 141 aa12.58□□□□□ -0.4
PHGDH-210ENST00000641115 KRTAP7-1Q8IUC3 87 aa12.58□□□□□ -0.4
PHGDH-210ENST00000641115 TMEM126AQ9H061 195 aa12.57□□□□□ -0.4
PHGDH-210ENST00000641115 M0QXV9 152 aa12.56□□□□□ -0.4
PHGDH-210ENST00000641115 C22orf24Q9Y442 160 aa12.56□□□□□ -0.4
PHGDH-210ENST00000641115 H7C2G1 150 aa12.55□□□□□ -0.4
PHGDH-210ENST00000641115 KRTAP10-1P60331 282 aa12.55□□□□□ -0.4
PHGDH-210ENST00000641115 Q1RN00 199 aa12.55□□□□□ -0.4
PHGDH-210ENST00000641115 MRPL55Q7Z7F7 128 aaKnown RBP12.55□□□□□ -0.4
PHGDH-210ENST00000641115 HECTD4Q9Y4D8 3996 aa12.55□□□□□ -0.4
PHGDH-210ENST00000641115 LBHQ53QV2 105 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-210ENST00000641115 A0A087WYN8 130 aa12.54□□□□□ -0.4
PHGDH-210ENST00000641115 C7orf33Q8WU49 177 aa12.54□□□□□ -0.4
PHGDH-210ENST00000641115 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
PHGDH-210ENST00000641115 IGLV6-57P01721 117 aa12.53□□□□□ -0.4
PHGDH-210ENST00000641115 TRBV10-3A0A0K0K1G6 114 aa12.52□□□□□ -0.4
PHGDH-210ENST00000641115 TAX1BP3O14907 124 aa12.51□□□□□ -0.41
PHGDH-210ENST00000641115 TSPAN13O95857 204 aa12.51□□□□□ -0.41
PHGDH-210ENST00000641115 DNAH11Q96DT5 4516 aa12.51□□□□□ -0.41
PHGDH-210ENST00000641115 PKD1P98161 4303 aa12.51□□□□□ -0.41
PHGDH-210ENST00000641115 Q6ZSA8 131 aa12.51□□□□□ -0.41
PHGDH-210ENST00000641115 LINC00167Q96N53 147 aa12.51□□□□□ -0.41
PHGDH-210ENST00000641115 CBY1Q9Y3M2 126 aa12.51□□□□□ -0.41
PHGDH-210ENST00000641115 PLAC8Q9NZF1 115 aa12.5□□□□□ -0.41
PHGDH-210ENST00000641115 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
PHGDH-210ENST00000641115 RPL37AP8A6NKH3 93 aa12.48□□□□□ -0.41
PHGDH-210ENST00000641115 EPM2AB3EWF7 344 aa12.48□□□□□ -0.41
PHGDH-210ENST00000641115 PHF5AQ7RTV0 110 aaKnown RBP12.48□□□□□ -0.41
PHGDH-210ENST00000641115 TRAV23DV6A0A075B6W5 121 aa12.48□□□□□ -0.41
PHGDH-210ENST00000641115 PSMB2P49721 201 aa12.48□□□□□ -0.41
PHGDH-210ENST00000641115 SMIM11BQ8TCY0 68 aa12.48□□□□□ -0.41
PHGDH-210ENST00000641115 IGLV1-50A0A075B6I6 118 aa12.47□□□□□ -0.41
PHGDH-210ENST00000641115 C9orf118A6NHY6 69 aa12.47□□□□□ -0.41
PHGDH-210ENST00000641115 H3BUT2 72 aa12.46□□□□□ -0.41
PHGDH-210ENST00000641115 UBE2BP63146 152 aa12.46□□□□□ -0.41
PHGDH-210ENST00000641115 NAA38Q9BRA0 125 aaKnown RBP12.46□□□□□ -0.41
PHGDH-210ENST00000641115 RPL28P46779 137 aaKnown RBP12.45□□□□□ -0.42
PHGDH-210ENST00000641115 DNAH5Q8TE73 4624 aa12.45□□□□□ -0.42
PHGDH-210ENST00000641115 SCXQ7RTU7 201 aa12.44□□□□□ -0.42
PHGDH-210ENST00000641115 CIRBP-AS1Q8TBR5 109 aa12.44□□□□□ -0.42
PHGDH-210ENST00000641115 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
PHGDH-210ENST00000641115 PRYO14603 147 aa12.43□□□□□ -0.42
PHGDH-210ENST00000641115 TRIAP1O43715 76 aa12.43□□□□□ -0.42
PHGDH-210ENST00000641115 COX6CP09669 75 aa12.42□□□□□ -0.42
PHGDH-210ENST00000641115 DIRC1Q969H9 104 aa12.42□□□□□ -0.42
PHGDH-210ENST00000641115 ZNF73O43830 326 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-210ENST00000641115 C6orf99Q4VX62 202 aa12.41□□□□□ -0.42
PHGDH-210ENST00000641115 LYRM7Q5U5X0 104 aa12.4□□□□□ -0.42
PHGDH-210ENST00000641115 A0A1W2PPM0 123 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms