RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 LOC107984640A0A0U1RRK4 108 aa9.95□□□□□ -0.82
SCARB2-221ENST00000640341 UQCRQO14949 82 aa9.95□□□□□ -0.82
SCARB2-221ENST00000640341 SMIM9A6NGZ8 99 aa9.94□□□□□ -0.82
SCARB2-221ENST00000640341 C9orf66Q5T8R8 295 aa9.94□□□□□ -0.82
SCARB2-221ENST00000640341 HIGD2BQ4VC39 106 aa9.94□□□□□ -0.82
SCARB2-221ENST00000640341 APOC4P55056 127 aa9.93□□□□□ -0.82
SCARB2-221ENST00000640341 TMEM256-PLSCR3K7ERE1 68 aa9.92□□□□□ -0.82
SCARB2-221ENST00000640341 STAB1Q9NY15 2570 aa9.92□□□□□ -0.82
SCARB2-221ENST00000640341 TRAV23DV6A0A075B6W5 121 aa9.92□□□□□ -0.82
SCARB2-221ENST00000640341 CCKP06307 115 aa9.92□□□□□ -0.82
SCARB2-221ENST00000640341 ENHOQ6UWT2 76 aa9.92□□□□□ -0.82
SCARB2-221ENST00000640341 ATOX1O00244 68 aa9.91□□□□□ -0.82
SCARB2-221ENST00000640341 COX7CP15954 63 aa9.91□□□□□ -0.82
SCARB2-221ENST00000640341 SPART-AS1P0CW21 52 aa9.91□□□□□ -0.82
SCARB2-221ENST00000640341 FAM19A1Q7Z5A9 133 aa9.91□□□□□ -0.82
SCARB2-221ENST00000640341 COL6A5A8TX70 2615 aa9.9□□□□□ -0.82
SCARB2-221ENST00000640341 USP17L23D6RBM5 183 aa9.9□□□□□ -0.82
SCARB2-221ENST00000640341 LINC01561Q8N1V8 128 aa9.9□□□□□ -0.82
SCARB2-221ENST00000640341 Q6ZQY7 126 aa9.9□□□□□ -0.82
SCARB2-221ENST00000640341 OBSCN-AS1Q96MR7 158 aa9.9□□□□□ -0.82
SCARB2-221ENST00000640341 CYSTM1Q9H1C7 97 aa9.9□□□□□ -0.82
SCARB2-221ENST00000640341 JMJD7-PLA2G4BH0Y9G9 81 aa9.89□□□□□ -0.83
SCARB2-221ENST00000640341 COX17Q14061 63 aa9.89□□□□□ -0.83
SCARB2-221ENST00000640341 Q6JHZ5 121 aa9.89□□□□□ -0.83
SCARB2-221ENST00000640341 RETNQ9HD89 108 aa9.89□□□□□ -0.83
SCARB2-221ENST00000640341 HAMPP81172 84 aa9.88□□□□□ -0.83
SCARB2-221ENST00000640341 Q8NAQ8 132 aa9.88□□□□□ -0.83
SCARB2-221ENST00000640341 NOTCH1P46531 2555 aa9.88□□□□□ -0.83
SCARB2-221ENST00000640341 IGHV4-30-4P0DP06 118 aa9.88□□□□□ -0.83
SCARB2-221ENST00000640341 NDUFC2O95298 119 aa9.88□□□□□ -0.83
SCARB2-221ENST00000640341 M0R2N4 97 aa9.87□□□□□ -0.83
SCARB2-221ENST00000640341 TRBV10-3A0A0K0K1G6 114 aa9.87□□□□□ -0.83
SCARB2-221ENST00000640341 UBL5Q9BZL1 73 aa9.87□□□□□ -0.83
SCARB2-221ENST00000640341 RBM3P98179 157 aaKnown RBP9.86□□□□□ -0.83
SCARB2-221ENST00000640341 LINC00575Q6W349 94 aa9.86□□□□□ -0.83
SCARB2-221ENST00000640341 LELP1Q5T871 98 aa9.86□□□□□ -0.83
SCARB2-221ENST00000640341 C2orf48Q96LS8 159 aa9.86□□□□□ -0.83
SCARB2-221ENST00000640341 ZNF561-AS1K7EIQ3 104 aa9.85□□□□□ -0.83
SCARB2-221ENST00000640341 WFDC10BQ8IUB3 73 aa9.85□□□□□ -0.83
SCARB2-221ENST00000640341 MIFP14174 115 aa9.84□□□□□ -0.83
SCARB2-221ENST00000640341 OXLD1Q5BKU9 147 aa9.84□□□□□ -0.83
SCARB2-221ENST00000640341 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
SCARB2-221ENST00000640341 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
SCARB2-221ENST00000640341 NBEAL1Q6ZS30 2694 aa9.84□□□□□ -0.83
SCARB2-221ENST00000640341 SCXQ7RTU7 201 aa9.83□□□□□ -0.84
SCARB2-221ENST00000640341 GHRHP01286 108 aa9.83□□□□□ -0.84
SCARB2-221ENST00000640341 DSCR8Q96T75 97 aa9.82□□□□□ -0.84
SCARB2-221ENST00000640341 TENM3Q9P273 2699 aa9.82□□□□□ -0.84
SCARB2-221ENST00000640341 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
SCARB2-221ENST00000640341 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
SCARB2-221ENST00000640341 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
SCARB2-221ENST00000640341 FBN1P35555 2871 aaKnown RBP9.81□□□□□ -0.84
SCARB2-221ENST00000640341 J3KT08 172 aa9.8□□□□□ -0.84
SCARB2-221ENST00000640341 LINC00167Q96N53 147 aa9.8□□□□□ -0.84
SCARB2-221ENST00000640341 DIRC1Q969H9 104 aa9.8□□□□□ -0.84
SCARB2-221ENST00000640341 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
SCARB2-221ENST00000640341 KPRPQ5T749 579 aaPredicted RBP9.79□□□□□ -0.84
SCARB2-221ENST00000640341 Q6ZTC4 211 aa9.79□□□□□ -0.84
SCARB2-221ENST00000640341 CRYGAP11844 174 aa9.78□□□□□ -0.84
SCARB2-221ENST00000640341 ZNF73O43830 326 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-221ENST00000640341 IGKV2D-24A0A075B6R9 120 aa9.77□□□□□ -0.85
SCARB2-221ENST00000640341 A0A0J9YWU9 116 aa9.77□□□□□ -0.85
SCARB2-221ENST00000640341 Q6ZQT0 140 aa9.77□□□□□ -0.85
SCARB2-221ENST00000640341 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
SCARB2-221ENST00000640341 MGAM2Q2M2H8 2515 aa9.77□□□□□ -0.85
SCARB2-221ENST00000640341 IGLV6-57P01721 117 aa9.77□□□□□ -0.85
SCARB2-221ENST00000640341 PRR34Q9NV39 138 aa9.77□□□□□ -0.85
SCARB2-221ENST00000640341 Q6ZRU5 148 aa9.76□□□□□ -0.85
SCARB2-221ENST00000640341 DEFB105AQ8NG35 78 aa9.75□□□□□ -0.85
SCARB2-221ENST00000640341 COX7BP24311 80 aa9.75□□□□□ -0.85
SCARB2-221ENST00000640341 Q6ZVQ6 151 aa9.73□□□□□ -0.85
SCARB2-221ENST00000640341 LINC01547P58512 204 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-221ENST00000640341 C1orf43Q9BWL3 253 aa9.72□□□□□ -0.85
SCARB2-221ENST00000640341 MUC7Q8TAX7 377 aa9.71□□□□□ -0.86
SCARB2-221ENST00000640341 ESRGQ1W209 222 aa9.7□□□□□ -0.86
SCARB2-221ENST00000640341 ATP5EP2Q5VTU8 51 aa9.7□□□□□ -0.86
SCARB2-221ENST00000640341 TRAV10A0A0B4J240 114 aa9.69□□□□□ -0.86
SCARB2-221ENST00000640341 Q8N9L7 120 aa9.69□□□□□ -0.86
SCARB2-221ENST00000640341 SNURFQ9Y675 71 aa9.69□□□□□ -0.86
SCARB2-221ENST00000640341 VPREB1P12018 145 aa9.68□□□□□ -0.86
SCARB2-221ENST00000640341 Q6ZRP5 223 aa9.68□□□□□ -0.86
SCARB2-221ENST00000640341 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-221ENST00000640341 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
SCARB2-221ENST00000640341 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
SCARB2-221ENST00000640341 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-221ENST00000640341 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
SCARB2-221ENST00000640341 RPL37AP8A6NKH3 93 aa9.66□□□□□ -0.86
SCARB2-221ENST00000640341 KRTAP10-11P60412 298 aa9.66□□□□□ -0.86
SCARB2-221ENST00000640341 LOC110117498A0A087WWA1 95 aa9.66□□□□□ -0.86
SCARB2-221ENST00000640341 GVQW2A0A096LPI5 108 aaPredicted RBP9.66□□□□□ -0.86
SCARB2-221ENST00000640341 ELOF1P60002 83 aaKnown RBP9.66□□□□□ -0.86
SCARB2-221ENST00000640341 DEFB131BA0A096LNP1 70 aa9.65□□□□□ -0.86
SCARB2-221ENST00000640341 NDUFC2-KCTD14E9PQ53 114 aa9.65□□□□□ -0.86
SCARB2-221ENST00000640341 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
SCARB2-221ENST00000640341 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
SCARB2-221ENST00000640341 ANK2Q01484 3957 aa9.65□□□□□ -0.86
SCARB2-221ENST00000640341 M0R378 163 aa9.65□□□□□ -0.86
SCARB2-221ENST00000640341 TMEM258P61165 79 aa9.65□□□□□ -0.86
SCARB2-221ENST00000640341 EGFEM1PQ0D2K5 195 aa9.65□□□□□ -0.87
SCARB2-221ENST00000640341 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms