RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 IGHV3-73A0A0B4J1V6 119 aa6.3□□□□□ -1.4
PAX6-259ENST00000639916 PROK1P58294 105 aa6.3□□□□□ -1.4
PAX6-259ENST00000639916 NOTCH3Q9UM47 2321 aa6.3□□□□□ -1.4
PAX6-259ENST00000639916 DAD1P61803 113 aa6.29□□□□□ -1.4
PAX6-259ENST00000639916 LINC00242Q5T6M2 205 aa6.29□□□□□ -1.4
PAX6-259ENST00000639916 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
PAX6-259ENST00000639916 TMEM254Q8TBM7 123 aa6.29□□□□□ -1.4
PAX6-259ENST00000639916 Q9UF83 564 aa6.29□□□□□ -1.4
PAX6-259ENST00000639916 NSD1Q96L73 2696 aaPredicted RBP6.29□□□□□ -1.4
PAX6-259ENST00000639916 IGHV3OR16-12A0A075B7B8 117 aa6.29□□□□□ -1.4
PAX6-259ENST00000639916 FN1P02751 2386 aaKnown RBP6.29□□□□□ -1.4
PAX6-259ENST00000639916 Q8N3U1 123 aa6.29□□□□□ -1.4
PAX6-259ENST00000639916 MRPL55Q7Z7F7 128 aaKnown RBP6.28□□□□□ -1.4
PAX6-259ENST00000639916 HAMPP81172 84 aa6.28□□□□□ -1.4
PAX6-259ENST00000639916 INAFM1C9JVW0 142 aa6.27□□□□□ -1.41
PAX6-259ENST00000639916 IGLV1-51P01701 117 aa6.27□□□□□ -1.41
PAX6-259ENST00000639916 Q6ZTC4 211 aa6.27□□□□□ -1.41
PAX6-259ENST00000639916 LINC00167Q96N53 147 aa6.27□□□□□ -1.41
PAX6-259ENST00000639916 KRTAP10-3P60369 221 aa6.27□□□□□ -1.41
PAX6-259ENST00000639916 C4orf48Q5BLP8 95 aa6.27□□□□□ -1.41
PAX6-259ENST00000639916 NREPQ16612 68 aa6.26□□□□□ -1.41
PAX6-259ENST00000639916 FUSP35637 526 aaKnown RBP eCLIP6.26□□□□□ -1.41
PAX6-259ENST00000639916 CMC4P56277 68 aaPredicted RBP6.26□□□□□ -1.41
PAX6-259ENST00000639916 Q6ZSN1 163 aa6.26□□□□□ -1.41
PAX6-259ENST00000639916 WFDC10AQ9H1F0 79 aa6.26□□□□□ -1.41
PAX6-259ENST00000639916 C2CD3Q4AC94 2353 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 TMEM256-PLSCR3K7ERE1 68 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 CCL18P55774 89 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 DGAT2L7PQ6IED9 249 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 Q6ZRP5 223 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 Q6ZVQ6 151 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 FBN1P35555 2871 aaKnown RBP6.25□□□□□ -1.41
PAX6-259ENST00000639916 ATRQ13535 2644 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 M0R2N4 97 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 RBM12B-AS1Q9P1G2 102 aa6.25□□□□□ -1.41
PAX6-259ENST00000639916 PRYO14603 147 aa6.24□□□□□ -1.41
PAX6-259ENST00000639916 Q1T7F1 81 aa6.24□□□□□ -1.41
PAX6-259ENST00000639916 Q6ZQT0 140 aa6.24□□□□□ -1.41
PAX6-259ENST00000639916 C11orf68Q9H3H3 251 aaKnown RBP6.24□□□□□ -1.41
PAX6-259ENST00000639916 ERC2-IT1O76042 136 aa6.24□□□□□ -1.41
PAX6-259ENST00000639916 CXCL6P80162 114 aa6.24□□□□□ -1.41
PAX6-259ENST00000639916 C19orf73Q9NVV2 129 aa6.24□□□□□ -1.41
PAX6-259ENST00000639916 TRGV1A0A0A0MS02 117 aa6.23□□□□□ -1.41
PAX6-259ENST00000639916 LRCOL1A6NCL2 159 aa6.23□□□□□ -1.41
PAX6-259ENST00000639916 GIG44P09565 113 aaPredicted RBP6.23□□□□□ -1.41
PAX6-259ENST00000639916 Q8N814 137 aa6.23□□□□□ -1.41
PAX6-259ENST00000639916 IGHV3-53P01767 116 aa6.23□□□□□ -1.41
PAX6-259ENST00000639916 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
PAX6-259ENST00000639916 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
PAX6-259ENST00000639916 hDV103S1A0JD37 113 aa6.22□□□□□ -1.41
PAX6-259ENST00000639916 PSPHP1O15172 72 aa6.22□□□□□ -1.41
PAX6-259ENST00000639916 LINC00158P58513 81 aa6.22□□□□□ -1.41
PAX6-259ENST00000639916 BPY2O14599 106 aa6.21□□□□□ -1.41
PAX6-259ENST00000639916 A8MU10 97 aa6.21□□□□□ -1.42
PAX6-259ENST00000639916 NOP10Q9NPE3 64 aaKnown RBP6.21□□□□□ -1.42
PAX6-259ENST00000639916 TENM1Q9UKZ4 2725 aa6.21□□□□□ -1.42
PAX6-259ENST00000639916 SCXQ7RTU7 201 aa6.2□□□□□ -1.42
PAX6-259ENST00000639916 TRRAPQ9Y4A5 3859 aa6.2□□□□□ -1.42
PAX6-259ENST00000639916 LOC110117498A0A087WWA1 95 aa6.2□□□□□ -1.42
PAX6-259ENST00000639916 TRBV6-4A0A1B0GX49 114 aa6.2□□□□□ -1.42
PAX6-259ENST00000639916 KTN1-AS1Q86SY8 53 aa6.2□□□□□ -1.42
PAX6-259ENST00000639916 CSNK1G2-AS1Q8NCQ2 148 aa6.2□□□□□ -1.42
PAX6-259ENST00000639916 C11orf45Q8TAV5 145 aa6.2□□□□□ -1.42
PAX6-259ENST00000639916 C16orf74Q96GX8 76 aa6.19□□□□□ -1.42
PAX6-259ENST00000639916 VWFP04275 2813 aa6.19□□□□□ -1.42
PAX6-259ENST00000639916 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
PAX6-259ENST00000639916 COX7B2Q8TF08 81 aa6.18□□□□□ -1.42
PAX6-259ENST00000639916 NTM-AS1Q6ZSK4 140 aa6.18□□□□□ -1.42
PAX6-259ENST00000639916 SPATA3Q8NHX4 192 aa6.18□□□□□ -1.42
PAX6-259ENST00000639916 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
PAX6-259ENST00000639916 TRGV2A0A075B6R0 118 aa6.17□□□□□ -1.42
PAX6-259ENST00000639916 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
PAX6-259ENST00000639916 K7EQD1 137 aa6.17□□□□□ -1.42
PAX6-259ENST00000639916 NANOS2P60321 138 aaKnown RBP6.17□□□□□ -1.42
PAX6-259ENST00000639916 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
PAX6-259ENST00000639916 LINC00588Q9Y4M8 146 aa6.17□□□□□ -1.42
PAX6-259ENST00000639916 COL6A5A8TX70 2615 aa6.17□□□□□ -1.42
PAX6-259ENST00000639916 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
PAX6-259ENST00000639916 CD164L2Q6UWJ8 174 aa6.16□□□□□ -1.42
PAX6-259ENST00000639916 SYCNQ0VAF6 134 aa6.15□□□□□ -1.42
PAX6-259ENST00000639916 C9orf66Q5T8R8 295 aa6.15□□□□□ -1.42
PAX6-259ENST00000639916 M0R378 163 aa6.15□□□□□ -1.43
PAX6-259ENST00000639916 CDC42SE2Q9NRR3 84 aa6.15□□□□□ -1.43
PAX6-259ENST00000639916 DNHD1Q96M86 4753 aa6.15□□□□□ -1.43
PAX6-259ENST00000639916 APOC4P55056 127 aa6.14□□□□□ -1.43
PAX6-259ENST00000639916 A8MUN3 132 aa6.13□□□□□ -1.43
PAX6-259ENST00000639916 STAB1Q9NY15 2570 aa6.13□□□□□ -1.43
PAX6-259ENST00000639916 TRGV4A0A0C4DH28 118 aa6.13□□□□□ -1.43
PAX6-259ENST00000639916 UBE2BP63146 152 aa6.13□□□□□ -1.43
PAX6-259ENST00000639916 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
PAX6-259ENST00000639916 NBEAL2Q6ZNJ1 2754 aa6.13□□□□□ -1.43
PAX6-259ENST00000639916 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
PAX6-259ENST00000639916 Q8N9L7 120 aa6.12□□□□□ -1.43
PAX6-259ENST00000639916 DEFB130BP0DP73 79 aa6.12□□□□□ -1.43
PAX6-259ENST00000639916 DEFB130AP0DP74 79 aa6.12□□□□□ -1.43
PAX6-259ENST00000639916 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
PAX6-259ENST00000639916 PKD1L1Q8TDX9 2849 aa6.11□□□□□ -1.43
PAX6-259ENST00000639916 PDE6GP18545 87 aa6.11□□□□□ -1.43
PAX6-259ENST00000639916 MUC7Q8TAX7 377 aa6.11□□□□□ -1.43
PAX6-259ENST00000639916 LINC00575Q6W349 94 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms