RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 GAGE2BQ13066 116 aa9.32□□□□□ -0.92
CNTNAP2-225ENST00000639247 BOD1L2Q8IYS8 172 aa9.32□□□□□ -0.92
CNTNAP2-225ENST00000639247 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
CNTNAP2-225ENST00000639247 A0A096LNI7 61 aa9.31□□□□□ -0.92
CNTNAP2-225ENST00000639247 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
CNTNAP2-225ENST00000639247 LINC00158P58513 81 aa9.31□□□□□ -0.92
CNTNAP2-225ENST00000639247 NPC2P61916 151 aa9.31□□□□□ -0.92
CNTNAP2-225ENST00000639247 HAMPP81172 84 aa9.31□□□□□ -0.92
CNTNAP2-225ENST00000639247 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
CNTNAP2-225ENST00000639247 LITAFQ99732 161 aa9.3□□□□□ -0.92
CNTNAP2-225ENST00000639247 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
CNTNAP2-225ENST00000639247 TSPAN13O95857 204 aa9.3□□□□□ -0.92
CNTNAP2-225ENST00000639247 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
CNTNAP2-225ENST00000639247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
CNTNAP2-225ENST00000639247 A6NDN8 102 aa9.29□□□□□ -0.92
CNTNAP2-225ENST00000639247 HERV-K104P63124 156 aa9.29□□□□□ -0.92
CNTNAP2-225ENST00000639247 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 J3QR89 54 aa9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 GCSHP23434 173 aa9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 MIR7-3HGQ8N6C7 128 aa9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 LRP1BQ9NZR2 4599 aa9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 DYNC1H1Q14204 4646 aaKnown RBP9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 C16orf90A8MZG2 172 aa9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 F8WDY8 70 aa9.28□□□□□ -0.92
CNTNAP2-225ENST00000639247 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
CNTNAP2-225ENST00000639247 C9orf129Q5T035 196 aaKnown RBP9.27□□□□□ -0.93
CNTNAP2-225ENST00000639247 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.93
CNTNAP2-225ENST00000639247 C2orf91Q6ZV80 131 aa9.27□□□□□ -0.93
CNTNAP2-225ENST00000639247 Q8NDZ9 215 aa9.27□□□□□ -0.93
CNTNAP2-225ENST00000639247 H3BUT2 72 aa9.26□□□□□ -0.93
CNTNAP2-225ENST00000639247 SND1-IT1Q9HBX3 110 aa9.26□□□□□ -0.93
CNTNAP2-225ENST00000639247 SPCS1Q9Y6A9 102 aa9.26□□□□□ -0.93
CNTNAP2-225ENST00000639247 A0A1W2PPM0 123 aa9.25□□□□□ -0.93
CNTNAP2-225ENST00000639247 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
CNTNAP2-225ENST00000639247 RPL24P83731 157 aaKnown RBP9.25□□□□□ -0.93
CNTNAP2-225ENST00000639247 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
CNTNAP2-225ENST00000639247 SOSTDC1Q6X4U4 206 aa9.25□□□□□ -0.93
CNTNAP2-225ENST00000639247 COX17Q14061 63 aa9.24□□□□□ -0.93
CNTNAP2-225ENST00000639247 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
CNTNAP2-225ENST00000639247 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
CNTNAP2-225ENST00000639247 A0A1W2PNN7 141 aa9.22□□□□□ -0.93
CNTNAP2-225ENST00000639247 FABP2P12104 132 aa9.22□□□□□ -0.93
CNTNAP2-225ENST00000639247 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
CNTNAP2-225ENST00000639247 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
CNTNAP2-225ENST00000639247 SERTAD4-AS1Q5TG53 156 aa9.22□□□□□ -0.93
CNTNAP2-225ENST00000639247 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.93
CNTNAP2-225ENST00000639247 FAM19A5Q7Z5A7 132 aaPredicted RBP9.2□□□□□ -0.94
CNTNAP2-225ENST00000639247 SPACA4Q8TDM5 124 aa9.2□□□□□ -0.94
CNTNAP2-225ENST00000639247 TIMM17BO60830 172 aa9.2□□□□□ -0.94
CNTNAP2-225ENST00000639247 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
CNTNAP2-225ENST00000639247 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
CNTNAP2-225ENST00000639247 MUSTN1Q8IVN3 82 aa9.19□□□□□ -0.94
CNTNAP2-225ENST00000639247 SPANXB1Q9NS25 103 aaPredicted RBP9.19□□□□□ -0.94
CNTNAP2-225ENST00000639247 A0A087WYN8 130 aa9.19□□□□□ -0.94
CNTNAP2-225ENST00000639247 HIST1H4GQ99525 98 aa9.18□□□□□ -0.94
CNTNAP2-225ENST00000639247 F8W1H4 67 aa9.17□□□□□ -0.94
CNTNAP2-225ENST00000639247 Q6ZSA8 131 aa9.17□□□□□ -0.94
CNTNAP2-225ENST00000639247 CIRBP-AS1Q8TBR5 109 aa9.17□□□□□ -0.94
CNTNAP2-225ENST00000639247 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
CNTNAP2-225ENST00000639247 SPANXCQ9NY87 97 aa9.17□□□□□ -0.94
CNTNAP2-225ENST00000639247 SCXQ7RTU7 201 aa9.17□□□□□ -0.94
CNTNAP2-225ENST00000639247 SS18L2Q9UHA2 77 aa9.17□□□□□ -0.94
CNTNAP2-225ENST00000639247 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
CNTNAP2-225ENST00000639247 HIGD1BQ9P298 99 aa9.16□□□□□ -0.94
CNTNAP2-225ENST00000639247 APOBP04114 4563 aaKnown RBP9.16□□□□□ -0.94
CNTNAP2-225ENST00000639247 NCR3O14931 201 aa9.15□□□□□ -0.94
CNTNAP2-225ENST00000639247 VPREB1P12018 145 aa9.15□□□□□ -0.94
CNTNAP2-225ENST00000639247 XGP55808 180 aa9.14□□□□□ -0.95
CNTNAP2-225ENST00000639247 PHF5AQ7RTV0 110 aaKnown RBP9.14□□□□□ -0.95
CNTNAP2-225ENST00000639247 RAB37Q96AX2 223 aa9.14□□□□□ -0.95
CNTNAP2-225ENST00000639247 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
CNTNAP2-225ENST00000639247 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
CNTNAP2-225ENST00000639247 KIAA1109Q2LD37 5005 aa9.13□□□□□ -0.95
CNTNAP2-225ENST00000639247 C22orf24Q9Y442 160 aa9.12□□□□□ -0.95
CNTNAP2-225ENST00000639247 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
CNTNAP2-225ENST00000639247 LOC107984156A0A0G2JMH3 177 aa9.12□□□□□ -0.95
CNTNAP2-225ENST00000639247 A4D1N5 150 aa9.12□□□□□ -0.95
CNTNAP2-225ENST00000639247 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
CNTNAP2-225ENST00000639247 FXYD2P54710 66 aa9.12□□□□□ -0.95
CNTNAP2-225ENST00000639247 ARL17AQ8IVW1 177 aa9.12□□□□□ -0.95
CNTNAP2-225ENST00000639247 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
CNTNAP2-225ENST00000639247 M0QXV9 152 aa9.11□□□□□ -0.95
CNTNAP2-225ENST00000639247 SMR3BP02814 79 aaPredicted RBP9.11□□□□□ -0.95
CNTNAP2-225ENST00000639247 CEND1Q8N111 149 aa9.11□□□□□ -0.95
CNTNAP2-225ENST00000639247 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
CNTNAP2-225ENST00000639247 PKIGQ9Y2B9 76 aa9.1□□□□□ -0.95
CNTNAP2-225ENST00000639247 IFITM1P13164 125 aa9.09□□□□□ -0.95
CNTNAP2-225ENST00000639247 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
CNTNAP2-225ENST00000639247 LINC00337Q8N6G1 96 aa9.09□□□□□ -0.95
CNTNAP2-225ENST00000639247 NKAPP1Q8N9T2 125 aa9.09□□□□□ -0.95
CNTNAP2-225ENST00000639247 LINC00167Q96N53 147 aa9.08□□□□□ -0.96
CNTNAP2-225ENST00000639247 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
CNTNAP2-225ENST00000639247 ETDBQ3ZM63 59 aa9.08□□□□□ -0.96
CNTNAP2-225ENST00000639247 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
CNTNAP2-225ENST00000639247 ANAPC13Q9BS18 74 aa9.08□□□□□ -0.96
CNTNAP2-225ENST00000639247 KRTAP17-1Q9BYP8 105 aa9.08□□□□□ -0.96
CNTNAP2-225ENST00000639247 CDIP1Q9H305 208 aa9.08□□□□□ -0.96
CNTNAP2-225ENST00000639247 FAT1Q14517 4588 aa9.07□□□□□ -0.96
CNTNAP2-225ENST00000639247 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
CNTNAP2-225ENST00000639247 HSPG2P98160 4391 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms